RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 STRN3Q13033 797 aa3.23□□□□□ -1.89
SMG1-212ENST00000566328 LAMB3Q13751 1172 aa3.23□□□□□ -1.89
SMG1-212ENST00000566328 CEP85Q6P2H3 762 aa3.23□□□□□ -1.89
SMG1-212ENST00000566328 KIAA0907Q7Z7F0 614 aaPredicted RBP3.23□□□□□ -1.89
SMG1-212ENST00000566328 RSPH3Q86UC2 560 aa3.23□□□□□ -1.89
SMG1-212ENST00000566328 RHOT1Q8IXI2 618 aa3.23□□□□□ -1.89
SMG1-212ENST00000566328 CMIPQ8IY22 773 aa3.23□□□□□ -1.89
SMG1-212ENST00000566328 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.23□□□□□ -1.89
SMG1-212ENST00000566328 IL17RDQ8NFM7 739 aa3.23□□□□□ -1.89
SMG1-212ENST00000566328 SPATA3Q8NHX4 192 aa3.23□□□□□ -1.89
SMG1-212ENST00000566328 UBXN4Q92575 508 aa3.23□□□□□ -1.89
SMG1-212ENST00000566328 RGMAQ96B86 450 aa3.23□□□□□ -1.89
SMG1-212ENST00000566328 HMCESQ96FZ2 354 aa3.23□□□□□ -1.89
SMG1-212ENST00000566328 PACSIN1Q9BY11 444 aa3.23□□□□□ -1.89
SMG1-212ENST00000566328 ADGRE3Q9BY15 652 aa3.23□□□□□ -1.89
SMG1-212ENST00000566328 EHD3Q9NZN3 535 aa3.23□□□□□ -1.89
SMG1-212ENST00000566328 JKAMPQ9P055 326 aa3.23□□□□□ -1.89
SMG1-212ENST00000566328 SPATA31A3Q5VYP0 1347 aa3.22□□□□□ -1.89
SMG1-212ENST00000566328 CNTNAP2Q9UHC6 1331 aa3.22□□□□□ -1.89
SMG1-212ENST00000566328 A0A0B4J269 797 aa3.22□□□□□ -1.89
SMG1-212ENST00000566328 H3BNC9 293 aa3.22□□□□□ -1.89
SMG1-212ENST00000566328 GRM6O15303 877 aa3.22□□□□□ -1.89
SMG1-212ENST00000566328 INSIG1O15503 277 aa3.22□□□□□ -1.89
SMG1-212ENST00000566328 TUBB4AP04350 444 aa3.22□□□□□ -1.89
SMG1-212ENST00000566328 FAM163BP0C2L3 166 aa3.22□□□□□ -1.89
SMG1-212ENST00000566328 EBLN1P0CF75 366 aa3.22□□□□□ -1.89
SMG1-212ENST00000566328 ZFXP17010 805 aaPredicted RBP3.22□□□□□ -1.89
SMG1-212ENST00000566328 NDUFB7P17568 137 aa3.22□□□□□ -1.89
SMG1-212ENST00000566328 CCKBRP32239 447 aa3.22□□□□□ -1.89
SMG1-212ENST00000566328 MMP13P45452 471 aa3.22□□□□□ -1.89
SMG1-212ENST00000566328 NPTX2P47972 431 aa3.22□□□□□ -1.89
SMG1-212ENST00000566328 TUBB3Q13509 450 aa3.22□□□□□ -1.89
SMG1-212ENST00000566328 BMPR2Q13873 1038 aa3.22□□□□□ -1.89
SMG1-212ENST00000566328 AWAT2Q6E213 333 aa3.22□□□□□ -1.89
SMG1-212ENST00000566328 SLC18B1Q6NT16 456 aa3.22□□□□□ -1.89
SMG1-212ENST00000566328 CFAP52Q8N1V2 620 aa3.22□□□□□ -1.89
SMG1-212ENST00000566328 SMOQ99835 787 aa3.22□□□□□ -1.89
SMG1-212ENST00000566328 TPSD1Q9BZJ3 242 aa3.22□□□□□ -1.89
SMG1-212ENST00000566328 IMPG2Q9BZV3 1241 aa3.22□□□□□ -1.89
SMG1-212ENST00000566328 TUBA8Q9NY65 449 aaPredicted RBP3.22□□□□□ -1.89
SMG1-212ENST00000566328 SAP30BPQ9UHR5 308 aaKnown RBP3.22□□□□□ -1.89
SMG1-212ENST00000566328 ADGRA2Q96PE1 1338 aa3.21□□□□□ -1.89
SMG1-212ENST00000566328 VWC2LB2RUY7 222 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 F5H697 171 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 NXPH3O95157 252 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 NTN1O95631 604 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 ANXA1P04083 346 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 SNHG28P0DPA3 235 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 CYP2D6P10635 497 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 MPGP29372 298 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 SLC6A4P31645 630 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 MTNR1BP49286 362 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 HNRNPMP52272 730 aaKnown RBP eCLIP3.21□□□□□ -1.9
SMG1-212ENST00000566328 RAPGEF1Q13905 1077 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 PXDC1Q5TGL8 231 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 ZNF365Q70YC5 407 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 MIGA2Q7L4E1 593 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 SLC29A4Q7RTT9 530 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 ZNF551Q7Z340 670 aaPredicted RBP3.21□□□□□ -1.9
SMG1-212ENST00000566328 ZNF804AQ7Z570 1209 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 TECPR1Q7Z6L1 1165 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 OR2I1PQ8NGU4 316 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 TBC1D5Q92609 795 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 RFKQ969G6 155 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 FKBP10Q96AY3 582 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 AHCYL2Q96HN2 611 aaKnown RBP3.21□□□□□ -1.9
SMG1-212ENST00000566328 DRC1Q96MC2 740 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 KLHL32Q96NJ5 620 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 TRIB1Q96RU8 372 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 OSBPL9Q96SU4 736 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 TMEM79Q9BSE2 394 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 PIF1Q9H611 641 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 SERTAD4Q9NUC0 356 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 TDP1Q9NUW8 608 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 C14orf119Q9NWQ9 140 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 SERGEFQ9UGK8 458 aa3.21□□□□□ -1.9
SMG1-212ENST00000566328 MYMKA6NI61 221 aa3.2□□□□□ -1.9
SMG1-212ENST00000566328 SLC43A1O75387 559 aa3.2□□□□□ -1.9
SMG1-212ENST00000566328 SOAT2O75908 522 aa3.2□□□□□ -1.9
SMG1-212ENST00000566328 OSMP13725 252 aa3.2□□□□□ -1.9
SMG1-212ENST00000566328 CPEP16870 476 aa3.2□□□□□ -1.9
SMG1-212ENST00000566328 WASP42768 502 aa3.2□□□□□ -1.9
SMG1-212ENST00000566328 GPR3P46089 330 aa3.2□□□□□ -1.9
SMG1-212ENST00000566328 MC2RQ01718 297 aa3.2□□□□□ -1.9
SMG1-212ENST00000566328 PROSER3Q2NL68 480 aa3.2□□□□□ -1.9
SMG1-212ENST00000566328 TEDDM1Q5T9Z0 273 aa3.2□□□□□ -1.9
SMG1-212ENST00000566328 PRAMEF17Q5VTA0 474 aa3.2□□□□□ -1.9
SMG1-212ENST00000566328 TAPT1Q6NXT6 567 aa3.2□□□□□ -1.9
SMG1-212ENST00000566328 TMPRSS9Q7Z410 1059 aa3.2□□□□□ -1.9
SMG1-212ENST00000566328 RNF180Q86T96 592 aa3.2□□□□□ -1.9
SMG1-212ENST00000566328 FAM9AQ8IZU1 332 aaPredicted RBP3.2□□□□□ -1.9
SMG1-212ENST00000566328 FANCBQ8NB91 859 aa3.2□□□□□ -1.9
SMG1-212ENST00000566328 SLC17A8Q8NDX2 589 aa3.2□□□□□ -1.9
SMG1-212ENST00000566328 NSUN7Q8NE18 718 aaKnown RBP3.2□□□□□ -1.9
SMG1-212ENST00000566328 ATRIPQ8WXE1 791 aa3.2□□□□□ -1.9
SMG1-212ENST00000566328 TMX3Q96JJ7 454 aa3.2□□□□□ -1.9
SMG1-212ENST00000566328 CCM2LQ9NUG4 571 aaPredicted RBP3.2□□□□□ -1.9
SMG1-212ENST00000566328 ELOVL5Q9NYP7 299 aa3.2□□□□□ -1.9
SMG1-212ENST00000566328 VSX1Q9NZR4 365 aaPredicted RBP3.2□□□□□ -1.9
SMG1-212ENST00000566328 SH3BP4Q9P0V3 963 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms