RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 LRRC8AQ8IWT6 810 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 GSTCDQ8NEC7 633 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 CXorf38Q8TB03 319 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 HELQQ8TDG4 1101 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 TAF4BQ92750 862 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 TATDN2Q93075 761 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 FAM81BQ96LP2 452 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 PPP1R10Q96QC0 940 aaKnown RBP11.9□□□□□ -0.5
SF3B3-205ENST00000564899 PANX2Q96RD6 677 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 DNAJC7Q99615 494 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 STK33Q9BYT3 514 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 NUCKS1Q9H1E3 243 aaKnown RBP11.9□□□□□ -0.5
SF3B3-205ENST00000564899 ELAC1Q9H777 363 aaKnown RBP11.9□□□□□ -0.5
SF3B3-205ENST00000564899 APOBEC3GQ9HC16 384 aaKnown RBP11.9□□□□□ -0.5
SF3B3-205ENST00000564899 UBE2TQ9NPD8 197 aaPredicted RBP11.9□□□□□ -0.5
SF3B3-205ENST00000564899 LRFN2Q9ULH4 789 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 PLAGL2Q9UPG8 496 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 AGAP1Q9UPQ3 857 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 PCDHB7Q9Y5E2 793 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.9□□□□□ -0.5
SF3B3-205ENST00000564899 VPS13AQ96RL7 3174 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.89□□□□□ -0.51
SF3B3-205ENST00000564899 GRXCR2A6NFK2 248 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 F8VZ95 297 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 INPPL1O15357 1258 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 NRDCO43847 1150 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 OFD1O75665 1012 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 THP07101 528 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 FGFR1P11362 822 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 ATICP31939 592 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 STAT1P42224 750 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 AFF1P51825 1210 aaKnown RBP11.89□□□□□ -0.51
SF3B3-205ENST00000564899 MFAP3P55082 362 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 JAM2P57087 298 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 GCNT1Q02742 428 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 SOX4Q06945 474 aaPredicted RBP11.89□□□□□ -0.51
SF3B3-205ENST00000564899 GRIK3Q13003 919 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 CUL2Q13617 745 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 DRAP1Q14919 205 aaPredicted RBP11.89□□□□□ -0.51
SF3B3-205ENST00000564899 CLLU1OSQ5K130 101 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 C9orf57Q5W0N0 161 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 HFE2Q6ZVN8 426 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 ENOSF1Q7L5Y1 443 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 NPAS4Q8IUM7 802 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 CCDC112Q8NEF3 446 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 URGCPQ8TCY9 931 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 KAT5Q92993 513 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 KREMEN1Q96MU8 473 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 ZNF830Q96NB3 372 aaPredicted RBP11.89□□□□□ -0.51
SF3B3-205ENST00000564899 ZBED2Q9BTP6 218 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 NIF3L1Q9GZT8 377 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 XYLT2Q9H1B5 865 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 KCNF1Q9H3M0 494 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 GOLGA2P5Q9HBQ8 144 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 RNF216Q9NWF9 866 aaPredicted RBP11.89□□□□□ -0.51
SF3B3-205ENST00000564899 ZNHIT6Q9NWK9 470 aaKnown RBP11.89□□□□□ -0.51
SF3B3-205ENST00000564899 MIOSQ9NXC5 875 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 MYO6Q9UM54 1294 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 NUB1Q9Y5A7 615 aa11.89□□□□□ -0.51
SF3B3-205ENST00000564899 ABHD14A-ACY1A0A1B0GW23 586 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 ANO9A1A5B4 782 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 PPEF2O14830 753 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 HOXA2O43364 376 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 EFCAB14O75071 495 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 STAU1O95793 577 aaKnown RBP11.88□□□□□ -0.51
SF3B3-205ENST00000564899 POMCP01189 267 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 TBXAS1P24557 533 aaPredicted RBP11.88□□□□□ -0.51
SF3B3-205ENST00000564899 LRPAP1P30533 357 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 MYO1EQ12965 1108 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 NAB2Q15742 525 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 ASIC2Q16515 512 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 HS1BP3Q53T59 392 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 ZNF667Q5HYK9 610 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 NOMO2Q5JPE7 1267 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 SFMBT2Q5VUG0 894 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 E4F1Q66K89 784 aaPredicted RBP11.88□□□□□ -0.51
SF3B3-205ENST00000564899 SCARA5Q6ZMJ2 495 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 GPIHBP1Q8IV16 184 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 ABI1Q8IZP0 508 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 LRRC52Q8N7C0 313 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 SYN2Q92777 582 aaPredicted RBP11.88□□□□□ -0.51
SF3B3-205ENST00000564899 HPDLQ96IR7 371 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 ZNF560Q96MR9 790 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 TGS1Q96RS0 853 aaKnown RBP11.88□□□□□ -0.51
SF3B3-205ENST00000564899 BAG1Q99933 345 aaPredicted RBP11.88□□□□□ -0.51
SF3B3-205ENST00000564899 VRTNQ9H8Y1 702 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 LMCD1Q9NZU5 365 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 NXF1Q9UBU9 619 aaKnown RBP11.88□□□□□ -0.51
SF3B3-205ENST00000564899 ANK1P16157 1881 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 ZFHX2Q9C0A1 2572 aaPredicted RBP11.88□□□□□ -0.51
SF3B3-205ENST00000564899 SPTBN4Q9H254 2564 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 DCHS1Q96JQ0 3298 aa11.88□□□□□ -0.51
SF3B3-205ENST00000564899 ZDBF2Q9HCK1 2354 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 CITO14578 2027 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 CASTOR2A6NHX0 329 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 PIRO00625 290 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 PNMA6AP0CW24 399 aaPredicted RBP11.87□□□□□ -0.51
SF3B3-205ENST00000564899 P4HA1P13674 534 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 FECHP22830 423 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 HNRNPH3P31942 346 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms