RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 VCPIP1Q96JH7 1222 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 SDCBP2Q9H190 292 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 RNF39Q9H2S5 420 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 AVENQ9NQS1 362 aaPredicted RBP20.85■□□□□ 0.93
CLN6-205ENST00000564846 TRMT13Q9NUP7 481 aaKnown RBP20.85■□□□□ 0.93
CLN6-205ENST00000564846 TUBGCP4Q9UGJ1 667 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 STXBP5LQ9Y2K9 1186 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 PCNTO95613 3336 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 FAM170AA1A519 330 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 CES2O00748 559 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 CILPO75339 1184 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 KIF4AO95239 1232 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 ATF7P17544 494 aaPredicted RBP20.85■□□□□ 0.93
CLN6-205ENST00000564846 CYP3A5P20815 502 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 CDH8P55286 799 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 FAM26DQ5JW98 314 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 GLRA4Q5JXX5 417 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 FBXO47Q5MNV8 452 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 C11orf63Q6NUN7 778 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 NT5DC3Q86UY8 548 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 PHF13Q86YI8 300 aaPredicted RBP20.85■□□□□ 0.93
CLN6-205ENST00000564846 CPA5Q8WXQ8 436 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 ANKRD7Q92527 254 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 RABGGTAQ92696 567 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 MMS19Q96T76 1030 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 PSMB7Q99436 277 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 ZNF518BQ9C0D4 1074 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 GOLPH3Q9H4A6 298 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 CNOT8Q9UFF9 292 aaKnown RBP20.85■□□□□ 0.93
CLN6-205ENST00000564846 AMFRQ9UKV5 643 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 PCDHGC3Q9UN70 934 aa20.85■□□□□ 0.93
CLN6-205ENST00000564846 MED7O43513 233 aa20.84■□□□□ 0.93
CLN6-205ENST00000564846 CFHP08603 1231 aa20.84■□□□□ 0.93
CLN6-205ENST00000564846 ZSCAN20P17040 1043 aaPredicted RBP20.84■□□□□ 0.93
CLN6-205ENST00000564846 CXCR5P32302 372 aa20.84■□□□□ 0.93
CLN6-205ENST00000564846 INCA1Q0VD86 236 aa20.84■□□□□ 0.93
CLN6-205ENST00000564846 TRIM71Q2Q1W2 868 aaKnown RBP20.84■□□□□ 0.93
CLN6-205ENST00000564846 TEX35Q5T0J7 233 aa20.84■□□□□ 0.93
CLN6-205ENST00000564846 C9orf57Q5W0N0 161 aa20.84■□□□□ 0.93
CLN6-205ENST00000564846 PASD1Q8IV76 773 aa20.84■□□□□ 0.93
CLN6-205ENST00000564846 C18orf25Q96B23 403 aaPredicted RBP20.84■□□□□ 0.93
CLN6-205ENST00000564846 NUP85Q9BW27 656 aa20.84■□□□□ 0.93
CLN6-205ENST00000564846 ERVK-5Q9HDB9 667 aa20.84■□□□□ 0.93
CLN6-205ENST00000564846 FAM105AQ9NUU6 356 aa20.84■□□□□ 0.93
CLN6-205ENST00000564846 KLK14Q9P0G3 267 aa20.84■□□□□ 0.93
CLN6-205ENST00000564846 PACSIN2Q9UNF0 486 aaPredicted RBP20.84■□□□□ 0.93
CLN6-205ENST00000564846 SQORQ9Y6N5 450 aa20.84■□□□□ 0.93
CLN6-205ENST00000564846 A0A1W2PQ45 241 aaPredicted RBP20.83■□□□□ 0.93
CLN6-205ENST00000564846 A0A1W2PQY0 241 aa20.83■□□□□ 0.93
CLN6-205ENST00000564846 BRD2P25440 801 aaKnown RBP20.83■□□□□ 0.93
CLN6-205ENST00000564846 PAFAH1B1P43034 410 aa20.83■□□□□ 0.93
CLN6-205ENST00000564846 RAD23BP54727 409 aa20.83■□□□□ 0.93
CLN6-205ENST00000564846 CCDC181Q5TID7 509 aa20.83■□□□□ 0.93
CLN6-205ENST00000564846 LIN9Q5TKA1 542 aa20.83■□□□□ 0.93
CLN6-205ENST00000564846 MON1BQ7L1V2 547 aa20.83■□□□□ 0.93
CLN6-205ENST00000564846 ZNF572Q7Z3I7 529 aaPredicted RBP20.83■□□□□ 0.93
CLN6-205ENST00000564846 USP38Q8NB14 1042 aa20.83■□□□□ 0.93
CLN6-205ENST00000564846 SLC43A3Q8NBI5 491 aa20.83■□□□□ 0.93
CLN6-205ENST00000564846 ZNF564Q8TBZ8 553 aaPredicted RBP20.83■□□□□ 0.93
CLN6-205ENST00000564846 TMEM176AQ96HP8 235 aa20.83■□□□□ 0.93
CLN6-205ENST00000564846 AGO3Q9H9G7 860 aaKnown RBP20.83■□□□□ 0.93
CLN6-205ENST00000564846 STARD7Q9NQZ5 370 aa20.83■□□□□ 0.93
CLN6-205ENST00000564846 BARX2Q9UMQ3 279 aaPredicted RBP20.83■□□□□ 0.93
CLN6-205ENST00000564846 ITIH3Q06033 890 aa20.82■□□□□ 0.92
CLN6-205ENST00000564846 C1QBPQ07021 282 aaKnown RBP20.82■□□□□ 0.92
CLN6-205ENST00000564846 PAK2Q13177 524 aa20.82■□□□□ 0.92
CLN6-205ENST00000564846 GPR161Q8N6U8 529 aaKnown RBP20.82■□□□□ 0.92
CLN6-205ENST00000564846 TMEM35BQ8NCS4 154 aa20.82■□□□□ 0.92
CLN6-205ENST00000564846 WHAMMQ8TF30 809 aa20.82■□□□□ 0.92
CLN6-205ENST00000564846 HES6Q96HZ4 224 aa20.82■□□□□ 0.92
CLN6-205ENST00000564846 PBKQ96KB5 322 aa20.82■□□□□ 0.92
CLN6-205ENST00000564846 ZSWIM1Q9BR11 485 aa20.82■□□□□ 0.92
CLN6-205ENST00000564846 BEGAINQ9BUH8 593 aa20.82■□□□□ 0.92
CLN6-205ENST00000564846 TRAIPQ9BWF2 469 aa20.82■□□□□ 0.92
CLN6-205ENST00000564846 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.82■□□□□ 0.924e-8■■■■□ 25.2
CLN6-205ENST00000564846 ADAM22Q9P0K1 906 aa20.82■□□□□ 0.92
CLN6-205ENST00000564846 PADI3Q9ULW8 664 aa20.82■□□□□ 0.92
CLN6-205ENST00000564846 CEP83Q9Y592 693 aa20.82■□□□□ 0.92
CLN6-205ENST00000564846 A0A0U1RQG5 324 aaPredicted RBP20.82■□□□□ 0.92
CLN6-205ENST00000564846 PIRO00625 290 aa20.82■□□□□ 0.92
CLN6-205ENST00000564846 ATMINO43313 823 aaPredicted RBP20.82■□□□□ 0.92
CLN6-205ENST00000564846 ITGA4P13612 1032 aa20.82■□□□□ 0.92
CLN6-205ENST00000564846 CD19P15391 556 aa20.82■□□□□ 0.92
CLN6-205ENST00000564846 CDH5P33151 784 aaPredicted RBP20.82■□□□□ 0.92
CLN6-205ENST00000564846 PNPLA4P41247 253 aa20.82■□□□□ 0.92
CLN6-205ENST00000564846 CFAP221Q4G0U5 840 aa20.82■□□□□ 0.92
CLN6-205ENST00000564846 SLC4A11Q8NBS3 891 aa20.82■□□□□ 0.92
CLN6-205ENST00000564846 TFAP2BQ92481 460 aa20.82■□□□□ 0.92
CLN6-205ENST00000564846 PHF24Q9UPV7 400 aa20.82■□□□□ 0.92
CLN6-205ENST00000564846 KBTBD13C9JR72 458 aa20.81■□□□□ 0.92
CLN6-205ENST00000564846 PDE2AO00408 941 aaPredicted RBP20.81■□□□□ 0.92
CLN6-205ENST00000564846 GHRP10912 638 aa20.81■□□□□ 0.92
CLN6-205ENST00000564846 RRM1P23921 792 aa20.81■□□□□ 0.92
CLN6-205ENST00000564846 CD52P31358 61 aa20.81■□□□□ 0.92
CLN6-205ENST00000564846 LPIN1Q14693 890 aa20.81■□□□□ 0.92
CLN6-205ENST00000564846 ZNF560Q96MR9 790 aa20.81■□□□□ 0.92
CLN6-205ENST00000564846 RPS6KC1Q96S38 1066 aa20.81■□□□□ 0.92
CLN6-205ENST00000564846 SEZ6LQ9BYH1 1024 aa20.81■□□□□ 0.92
CLN6-205ENST00000564846 LHX5Q9H2C1 402 aa20.81■□□□□ 0.92
CLN6-205ENST00000564846 KIAA1257Q9ULG3 409 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms