RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 NOBOXO60393 691 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 PDE8AO60658 829 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 USO1O60763 962 aaKnown RBP6.09□□□□□ -1.43
CHD9-210ENST00000564582 F2P00734 622 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 KNG1P01042 644 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 MYCLP1P12525 358 aaPredicted RBP6.09□□□□□ -1.43
CHD9-210ENST00000564582 ZNF18P17022 549 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 CCND1P24385 295 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 CNGA1P29973 690 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 CASP14P31944 242 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 SCNN1BP51168 640 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 NLRP5P59047 1200 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 TOB2Q14106 344 aaPredicted RBP6.09□□□□□ -1.43
CHD9-210ENST00000564582 CLUL1Q15846 466 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 DPCR1Q3MIW9 517 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 SPECC1Q5M775 1068 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 SPATA1Q5VX52 437 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 ANO1Q5XXA6 986 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 CAPRIN2Q6IMN6 1127 aaKnown RBP6.09□□□□□ -1.43
CHD9-210ENST00000564582 FSTL4Q6MZW2 842 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 KCNV1Q6PIU1 500 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 TTLL10Q6ZVT0 673 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 TRAPPC11Q7Z392 1133 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 PPP1R42Q7Z4L9 355 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 PLEKHH3Q7Z736 793 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 ZDHHC14Q8IZN3 488 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 KLHL36Q8N4N3 616 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 NECAB1Q8N987 351 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 DRAXINQ8NBI3 349 aaPredicted RBP6.09□□□□□ -1.43
CHD9-210ENST00000564582 OR2W6PQ8NHA6 318 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 ZNF483Q8TF39 744 aaPredicted RBP6.09□□□□□ -1.43
CHD9-210ENST00000564582 NOC3LQ8WTT2 800 aaKnown RBP6.09□□□□□ -1.43
CHD9-210ENST00000564582 CENPTQ96BT3 561 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 LRRC45Q96CN5 670 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 TBC1D31Q96DN5 1066 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 BICD1Q96G01 975 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 C8orf76Q96K31 380 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 SCYL1Q96KG9 808 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 USP28Q96RU2 1077 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 BTBD2Q9BX70 525 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 USP44Q9H0E7 712 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 XYLT2Q9H1B5 865 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 KAT14Q9H8E8 782 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 EBF2Q9HAK2 575 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 HELLSQ9NRZ9 838 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 UCKL1Q9NWZ5 548 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 RPL26L1Q9UNX3 145 aaKnown RBP6.09□□□□□ -1.43
CHD9-210ENST00000564582 ADAMTS20P59510 1910 aa6.09□□□□□ -1.44
CHD9-210ENST00000564582 MROH1Q8NDA8 1641 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 OTOL1A6NHN0 477 aaPredicted RBP6.08□□□□□ -1.44
CHD9-210ENST00000564582 LRRIQ3A6PVS8 624 aaPredicted RBP6.08□□□□□ -1.44
CHD9-210ENST00000564582 LARGE1O95461 756 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 MAP4K4O95819 1239 aaPredicted RBP6.08□□□□□ -1.44
CHD9-210ENST00000564582 VIMP08670 466 aaKnown RBP6.08□□□□□ -1.44
CHD9-210ENST00000564582 GSTA2P09210 222 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 COL6A1P12109 1028 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 MC4RP32245 332 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 ECE1P42892 770 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 PLCD1P51178 756 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 CCNG1P51959 295 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 NDUFA8P51970 172 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 MRPS25P82663 173 aaKnown RBP6.08□□□□□ -1.44
CHD9-210ENST00000564582 MRPS35P82673 323 aaKnown RBP6.08□□□□□ -1.44
CHD9-210ENST00000564582 CDK17Q00537 523 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 ROR2Q01974 943 aaKnown RBP6.08□□□□□ -1.44
CHD9-210ENST00000564582 TRIM29Q14134 588 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 SAFB2Q14151 953 aaKnown RBP eCLIP6.08□□□□□ -1.44
CHD9-210ENST00000564582 PDIA5Q14554 519 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 NAA25Q14CX7 972 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 SAFBQ15424 915 aaKnown RBP eCLIP6.08□□□□□ -1.44
CHD9-210ENST00000564582 SLC5A9Q2M3M2 681 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 WDR72Q3MJ13 1102 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 MCMDC2Q4G0Z9 681 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 CATSPEREQ5SY80 951 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 RNF187Q5TA31 235 aaPredicted RBP6.08□□□□□ -1.44
CHD9-210ENST00000564582 GKAP1Q5VSY0 366 aaPredicted RBP6.08□□□□□ -1.44
CHD9-210ENST00000564582 CYB5D1Q6P9G0 228 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 SLC30A9Q6PML9 568 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 CEP57Q86XR8 500 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 LMNTD2Q8IXW0 634 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 CCDC13Q8IYE1 715 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 ZZZ3Q8IYH5 903 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 CACNA2D3Q8IZS8 1091 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 LGI4Q8N135 537 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 NSUN7Q8NE18 718 aaKnown RBP6.08□□□□□ -1.44
CHD9-210ENST00000564582 AENQ8WTP8 325 aaKnown RBP6.08□□□□□ -1.44
CHD9-210ENST00000564582 CUL5Q93034 780 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 ALS2CR12Q96Q35 445 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 GSDMAQ96QA5 445 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 PNKPQ96T60 521 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 SELENOOQ9BVL4 669 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 NSRP1Q9H0G5 558 aaKnown RBP6.08□□□□□ -1.44
CHD9-210ENST00000564582 STMN4Q9H169 189 aaPredicted RBP6.08□□□□□ -1.44
CHD9-210ENST00000564582 VCXQ9H320 206 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 PUF60Q9UHX1 559 aaKnown RBP6.08□□□□□ -1.44
CHD9-210ENST00000564582 KCNG1Q9UIX4 513 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 HPSEQ9Y251 543 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 SPO11Q9Y5K1 396 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 KIF20BQ96Q89 1820 aa6.08□□□□□ -1.44
CHD9-210ENST00000564582 NCAPD2Q15021 1401 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms