RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 TSC2P49815 1807 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 KPNA7A9QM74 516 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 PDXKO00764 312 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 PPEF2O14830 753 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 CALUO43852 315 aaPredicted RBP14.45□□□□□ -0.1
CLK3-216ENST00000564468 EXOC3O60645 756 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 CYP11A1P05108 521 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 CPB1P15086 417 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 CYP2J2P51589 502 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 RBP5P82980 135 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 FAM160A1Q05DH4 1040 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 MYBPC2Q14324 1141 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 BMP8AQ7Z5Y6 402 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 CBWD2Q8IUF1 395 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 WDR49Q8IV35 697 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 ZDHHC14Q8IZN3 488 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 FMR1NBQ8N0W7 255 aaPredicted RBP14.45□□□□□ -0.1
CLK3-216ENST00000564468 THEM5Q8N1Q8 247 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 CSGALNACT2Q8N6G5 542 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 LRRC52Q8N7C0 313 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 RDH13Q8NBN7 331 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 SLC7A14Q8TBB6 771 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 TMEM174Q8WUU8 243 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 PBXIP1Q96AQ6 731 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 ZNF707Q96C28 371 aaPredicted RBP14.45□□□□□ -0.1
CLK3-216ENST00000564468 TIGD1Q96MW7 591 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 GTPBP4Q9BZE4 634 aaKnown RBP14.45□□□□□ -0.1
CLK3-216ENST00000564468 IRF2BPLQ9H1B7 796 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 INTS13Q9NVM9 706 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 RMND1Q9NWS8 449 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 AFF4Q9UHB7 1163 aaKnown RBP14.45□□□□□ -0.1
CLK3-216ENST00000564468 CDH22Q9UJ99 828 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 AGAP1Q9UPQ3 857 aa14.45□□□□□ -0.1
CLK3-216ENST00000564468 CLUHO75153 1309 aa14.44□□□□□ -0.1
CLK3-216ENST00000564468 USP34Q70CQ2 3546 aa14.44□□□□□ -0.1
CLK3-216ENST00000564468 WDR27A2RRH5 827 aa14.44□□□□□ -0.1
CLK3-216ENST00000564468 C2CD4DB7Z1M9 353 aa14.44□□□□□ -0.1
CLK3-216ENST00000564468 CYB561D2O14569 222 aa14.44□□□□□ -0.1
CLK3-216ENST00000564468 PRRG1O14668 218 aa14.44□□□□□ -0.1
CLK3-216ENST00000564468 LRG1P02750 347 aa14.44□□□□□ -0.1
CLK3-216ENST00000564468 ITGB3P05106 788 aa14.44□□□□□ -0.1
CLK3-216ENST00000564468 KRT19P08727 400 aa14.44□□□□□ -0.1
CLK3-216ENST00000564468 PRR29P0C7W0 189 aa14.44□□□□□ -0.1
CLK3-216ENST00000564468 TNNI1P19237 187 aa14.44□□□□□ -0.1
CLK3-216ENST00000564468 POLR2BP30876 1174 aaKnown RBP14.44□□□□□ -0.1
CLK3-216ENST00000564468 MYO1EQ12965 1108 aa14.44□□□□□ -0.1
CLK3-216ENST00000564468 PSMD6Q15008 389 aa14.44□□□□□ -0.1
CLK3-216ENST00000564468 SLC9A9Q8IVB4 645 aa14.44□□□□□ -0.1
CLK3-216ENST00000564468 TCEAL8Q8IYN2 117 aa14.44□□□□□ -0.1
CLK3-216ENST00000564468 C1orf127Q8N9H9 656 aa14.44□□□□□ -0.1
CLK3-216ENST00000564468 CYP4F11Q9HBI6 524 aa14.44□□□□□ -0.1
CLK3-216ENST00000564468 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.44□□□□□ -0.1
CLK3-216ENST00000564468 TIMM13Q9Y5L4 95 aaPredicted RBP14.44□□□□□ -0.1
CLK3-216ENST00000564468 NOTCH4Q99466 2003 aa14.43□□□□□ -0.1
CLK3-216ENST00000564468 SPTLC1O15269 473 aa14.43□□□□□ -0.1
CLK3-216ENST00000564468 HUS1O60921 280 aa14.43□□□□□ -0.1
CLK3-216ENST00000564468 SMC2O95347 1197 aa14.43□□□□□ -0.1
CLK3-216ENST00000564468 SP100P23497 879 aaPredicted RBP14.43□□□□□ -0.1
CLK3-216ENST00000564468 WNT7BP56706 349 aa14.43□□□□□ -0.1
CLK3-216ENST00000564468 CYP24A1Q07973 514 aa14.43□□□□□ -0.1
CLK3-216ENST00000564468 SMARCB1Q12824 385 aa14.43□□□□□ -0.1
CLK3-216ENST00000564468 GPR17Q13304 367 aa14.43□□□□□ -0.1
CLK3-216ENST00000564468 ELMOD1Q8N336 334 aa14.43□□□□□ -0.1
CLK3-216ENST00000564468 TMEM130Q8N3G9 435 aa14.43□□□□□ -0.1
CLK3-216ENST00000564468 GUF1Q8N442 669 aaKnown RBP14.43□□□□□ -0.1
CLK3-216ENST00000564468 ENGASEQ8NFI3 743 aa14.43□□□□□ -0.1
CLK3-216ENST00000564468 GSDMAQ96QA5 445 aa14.43□□□□□ -0.1
CLK3-216ENST00000564468 MTMR12Q9C0I1 747 aa14.43□□□□□ -0.1
CLK3-216ENST00000564468 KCTD10Q9H3F6 313 aa14.43□□□□□ -0.1
CLK3-216ENST00000564468 POLIQ9UNA4 740 aa14.43□□□□□ -0.1
CLK3-216ENST00000564468 ZFP37Q9Y6Q3 630 aaPredicted RBP14.43□□□□□ -0.1
CLK3-216ENST00000564468 ZNF318Q5VUA4 2279 aa14.43□□□□□ -0.1
CLK3-216ENST00000564468 TMEM221A6NGB7 291 aa14.42□□□□□ -0.1
CLK3-216ENST00000564468 M0R296 226 aa14.42□□□□□ -0.1
CLK3-216ENST00000564468 CCL16O15467 120 aa14.42□□□□□ -0.1
CLK3-216ENST00000564468 DLATP10515 647 aaKnown RBP14.42□□□□□ -0.1
CLK3-216ENST00000564468 RPL13P26373 211 aaKnown RBP14.42□□□□□ -0.1
CLK3-216ENST00000564468 GBP2P32456 591 aaPredicted RBP14.42□□□□□ -0.1
CLK3-216ENST00000564468 AP3M2P53677 418 aa14.42□□□□□ -0.1
CLK3-216ENST00000564468 ADCY1Q08828 1119 aa14.42□□□□□ -0.1
CLK3-216ENST00000564468 BFSP1Q12934 665 aa14.42□□□□□ -0.1
CLK3-216ENST00000564468 PLD1Q13393 1074 aa14.42□□□□□ -0.1
CLK3-216ENST00000564468 SNW1Q13573 536 aaKnown RBP14.42□□□□□ -0.1
CLK3-216ENST00000564468 PTPN21Q16825 1174 aa14.42□□□□□ -0.1
CLK3-216ENST00000564468 TRIM67Q6ZTA4 783 aa14.42□□□□□ -0.1
CLK3-216ENST00000564468 ELOA2Q8IYF1 753 aaPredicted RBP14.42□□□□□ -0.1
CLK3-216ENST00000564468 TMEM86AQ8N2M4 240 aa14.42□□□□□ -0.1
CLK3-216ENST00000564468 SPATA18Q8TC71 538 aa14.42□□□□□ -0.1
CLK3-216ENST00000564468 BORCS6Q96GS4 357 aa14.42□□□□□ -0.1
CLK3-216ENST00000564468 CGRRF1Q99675 332 aa14.42□□□□□ -0.1
CLK3-216ENST00000564468 DMAC2Q9NW81 257 aa14.42□□□□□ -0.1
CLK3-216ENST00000564468 GDAP2Q9NXN4 497 aa14.42□□□□□ -0.1
CLK3-216ENST00000564468 TRAF3IP3Q9Y228 551 aa14.42□□□□□ -0.1
CLK3-216ENST00000564468 FRMD4BQ9Y2L6 1034 aa14.42□□□□□ -0.1
CLK3-216ENST00000564468 CFAP54Q96N23 3096 aa14.42□□□□□ -0.1
CLK3-216ENST00000564468 KINO60870 393 aaKnown RBP14.41□□□□□ -0.1
CLK3-216ENST00000564468 NR3C1P04150 777 aa14.41□□□□□ -0.1
CLK3-216ENST00000564468 PTPN2P17706 415 aa14.41□□□□□ -0.1
CLK3-216ENST00000564468 FSHRP23945 695 aa14.41□□□□□ -0.1
CLK3-216ENST00000564468 NFIL3Q16649 462 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms