RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 GLUD1P00367 558 aa17.94■□□□□ 0.46
RNF40-206ENST00000564260 CA8P35219 290 aa17.94■□□□□ 0.46
RNF40-206ENST00000564260 LHX1P48742 406 aa17.94■□□□□ 0.46
RNF40-206ENST00000564260 MXI1P50539 228 aa17.94■□□□□ 0.46
RNF40-206ENST00000564260 CLCN4P51793 760 aa17.94■□□□□ 0.46
RNF40-206ENST00000564260 CETN1Q12798 172 aa17.94■□□□□ 0.46
RNF40-206ENST00000564260 CCDC40Q4G0X9 1142 aa17.94■□□□□ 0.46
RNF40-206ENST00000564260 C1orf220Q5T0J3 134 aa17.94■□□□□ 0.46
RNF40-206ENST00000564260 TPGS2Q68CL5 300 aa17.94■□□□□ 0.46
RNF40-206ENST00000564260 LMBRD2Q68DH5 695 aaPredicted RBP17.94■□□□□ 0.46
RNF40-206ENST00000564260 CAVIN1Q6NZI2 390 aaKnown RBP17.94■□□□□ 0.46
RNF40-206ENST00000564260 THEM5Q8N1Q8 247 aa17.94■□□□□ 0.46
RNF40-206ENST00000564260 CCDC150Q8NCX0 1101 aa17.94■□□□□ 0.46
RNF40-206ENST00000564260 ENOX1Q8TC92 643 aaKnown RBP17.94■□□□□ 0.46
RNF40-206ENST00000564260 SLC22A17Q8WUG5 538 aa17.94■□□□□ 0.46
RNF40-206ENST00000564260 CLSTN3Q9BQT9 956 aa17.94■□□□□ 0.46
RNF40-206ENST00000564260 UBE2ZQ9H832 354 aaPredicted RBP17.94■□□□□ 0.46
RNF40-206ENST00000564260 HSFX1Q9UBD0 423 aa17.94■□□□□ 0.46
RNF40-206ENST00000564260 HCFC2Q9Y5Z7 792 aa17.94■□□□□ 0.46
RNF40-206ENST00000564260 C2CD2LO14523 706 aa17.93■□□□□ 0.46
RNF40-206ENST00000564260 TACC1O75410 805 aa17.93■□□□□ 0.46
RNF40-206ENST00000564260 POU2F2P09086 479 aa17.93■□□□□ 0.46
RNF40-206ENST00000564260 DLG4P78352 724 aa17.93■□□□□ 0.46
RNF40-206ENST00000564260 SKIV2LQ15477 1246 aaKnown RBP17.93■□□□□ 0.46
RNF40-206ENST00000564260 TPD52L1Q16890 204 aaPredicted RBP17.93■□□□□ 0.46
RNF40-206ENST00000564260 UVSSAQ2YD98 709 aa17.93■□□□□ 0.46
RNF40-206ENST00000564260 LILRA6Q6PI73 481 aa17.93■□□□□ 0.46
RNF40-206ENST00000564260 TRIM59Q8IWR1 403 aa17.93■□□□□ 0.46
RNF40-206ENST00000564260 TTC39CQ8N584 583 aa17.93■□□□□ 0.46
RNF40-206ENST00000564260 ATXN2LQ8WWM7 1075 aaKnown RBP17.93■□□□□ 0.46
RNF40-206ENST00000564260 AUTS2Q8WXX7 1259 aa17.93■□□□□ 0.46
RNF40-206ENST00000564260 SLC35C1Q96A29 364 aa17.93■□□□□ 0.46
RNF40-206ENST00000564260 SRRTQ9BXP5 876 aaKnown RBP17.93■□□□□ 0.46
RNF40-206ENST00000564260 XYLT2Q9H1B5 865 aa17.93■□□□□ 0.46
RNF40-206ENST00000564260 THEGQ9P2T0 379 aa17.93■□□□□ 0.46
RNF40-206ENST00000564260 FAM50BQ9Y247 325 aa17.93■□□□□ 0.46
RNF40-206ENST00000564260 COQ4Q9Y3A0 265 aa17.93■□□□□ 0.46
RNF40-206ENST00000564260 PCDHGC5Q9Y5F6 944 aa17.93■□□□□ 0.46
RNF40-206ENST00000564260 I3L4J1 428 aa17.92■□□□□ 0.46
RNF40-206ENST00000564260 ASS1P00966 412 aaKnown RBP17.92■□□□□ 0.46
RNF40-206ENST00000564260 CST3P01034 146 aaPredicted RBP17.92■□□□□ 0.46
RNF40-206ENST00000564260 HOXA9P31269 272 aa17.92■□□□□ 0.46
RNF40-206ENST00000564260 STX17P56962 302 aa17.92■□□□□ 0.46
RNF40-206ENST00000564260 TNNC1P63316 161 aa17.92■□□□□ 0.46
RNF40-206ENST00000564260 CCDC85BQ15834 202 aaPredicted RBP17.92■□□□□ 0.46
RNF40-206ENST00000564260 ZNF699Q32M78 642 aa17.92■□□□□ 0.46
RNF40-206ENST00000564260 CTXN3Q4LDR2 81 aa17.92■□□□□ 0.46
RNF40-206ENST00000564260 RBM23Q86U06 439 aaKnown RBP17.92■□□□□ 0.46
RNF40-206ENST00000564260 FBXL13Q8NEE6 735 aa17.92■□□□□ 0.46
RNF40-206ENST00000564260 CMASQ8NFW8 434 aaPredicted RBP17.92■□□□□ 0.46
RNF40-206ENST00000564260 ZNF461Q8TAF7 563 aa17.92■□□□□ 0.46
RNF40-206ENST00000564260 C2orf15Q8WU43 125 aaKnown RBP17.92■□□□□ 0.46
RNF40-206ENST00000564260 BPIFA3Q9BQP9 254 aa17.92■□□□□ 0.46
RNF40-206ENST00000564260 ZDHHC7Q9NXF8 308 aa17.92■□□□□ 0.46
RNF40-206ENST00000564260 CLDND1Q9NY35 253 aa17.92■□□□□ 0.46
RNF40-206ENST00000564260 FBXL5Q9UKA1 691 aa17.92■□□□□ 0.46
RNF40-206ENST00000564260 SNX9Q9Y5X1 595 aa17.92■□□□□ 0.46
RNF40-206ENST00000564260 COL6A3P12111 3177 aa17.92■□□□□ 0.46
RNF40-206ENST00000564260 TULP1O00294 542 aaPredicted RBP17.91■□□□□ 0.46
RNF40-206ENST00000564260 GABRDO14764 452 aa17.91■□□□□ 0.46
RNF40-206ENST00000564260 PER2O15055 1255 aa17.91■□□□□ 0.46
RNF40-206ENST00000564260 ABLIM3O94929 683 aa17.91■□□□□ 0.46
RNF40-206ENST00000564260 IGFBP6P24592 240 aaPredicted RBP17.91■□□□□ 0.46
RNF40-206ENST00000564260 PCSK1P29120 753 aa17.91■□□□□ 0.46
RNF40-206ENST00000564260 GCLMP48507 274 aa17.91■□□□□ 0.46
RNF40-206ENST00000564260 MYL7Q01449 175 aa17.91■□□□□ 0.46
RNF40-206ENST00000564260 ITIH3Q06033 890 aa17.91■□□□□ 0.46
RNF40-206ENST00000564260 PPP3CAQ08209 521 aa17.91■□□□□ 0.46
RNF40-206ENST00000564260 LEXMQ3ZCV2 418 aa17.91■□□□□ 0.46
RNF40-206ENST00000564260 DCAF17Q5H9S7 520 aaPredicted RBP17.91■□□□□ 0.46
RNF40-206ENST00000564260 ZNF667Q5HYK9 610 aa17.91■□□□□ 0.46
RNF40-206ENST00000564260 TCERG1LQ5VWI1 586 aa17.91■□□□□ 0.46
RNF40-206ENST00000564260 PRSS55Q6UWB4 352 aaPredicted RBP17.91■□□□□ 0.46
RNF40-206ENST00000564260 CCDC149Q6ZUS6 474 aa17.91■□□□□ 0.46
RNF40-206ENST00000564260 EEF2KMTQ96G04 330 aa17.91■□□□□ 0.46
RNF40-206ENST00000564260 MSLNLQ96KJ4 702 aa17.91■□□□□ 0.46
RNF40-206ENST00000564260 B3GALT6Q96L58 329 aa17.91■□□□□ 0.46
RNF40-206ENST00000564260 ACBD6Q9BR61 282 aa17.91■□□□□ 0.46
RNF40-206ENST00000564260 DNAI2Q9GZS0 605 aa17.91■□□□□ 0.46
RNF40-206ENST00000564260 IGFLR1Q9H665 355 aa17.91■□□□□ 0.46
RNF40-206ENST00000564260 SFXN1Q9H9B4 322 aa17.91■□□□□ 0.46
RNF40-206ENST00000564260 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.91■□□□□ 0.46
RNF40-206ENST00000564260 CDY1Q9Y6F8 540 aa17.91■□□□□ 0.46
RNF40-206ENST00000564260 VNN1O95497 513 aa17.9■□□□□ 0.46
RNF40-206ENST00000564260 GLP2RO95838 553 aa17.9■□□□□ 0.46
RNF40-206ENST00000564260 TRIM49P0CI25 452 aa17.9■□□□□ 0.46
RNF40-206ENST00000564260 TRIM49CP0CI26 452 aa17.9■□□□□ 0.46
RNF40-206ENST00000564260 ATF2P15336 505 aa17.9■□□□□ 0.46
RNF40-206ENST00000564260 EEF1GP26641 437 aaKnown RBP17.9■□□□□ 0.46
RNF40-206ENST00000564260 OR1D2P34982 312 aa17.9■□□□□ 0.46
RNF40-206ENST00000564260 LTBRP36941 435 aa17.9■□□□□ 0.46
RNF40-206ENST00000564260 PIK3CAP42336 1068 aa17.9■□□□□ 0.46
RNF40-206ENST00000564260 MYL6P60660 151 aa17.9■□□□□ 0.46
RNF40-206ENST00000564260 TYRO3Q06418 890 aa17.9■□□□□ 0.46
RNF40-206ENST00000564260 GPR17Q13304 367 aa17.9■□□□□ 0.46
RNF40-206ENST00000564260 WDR72Q3MJ13 1102 aa17.9■□□□□ 0.46
RNF40-206ENST00000564260 ANKRD54Q6NXT1 300 aa17.9■□□□□ 0.46
RNF40-206ENST00000564260 PDCL2Q8N4E4 241 aa17.9■□□□□ 0.46
RNF40-206ENST00000564260 PPM1EQ8WY54 764 aa17.9■□□□□ 0.46
RNF40-206ENST00000564260 MED15Q96RN5 788 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms