RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 ADRA1DP25100 572 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 SMARCA1P28370 1054 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 CDH6P55285 790 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 MROH9Q5TGP6 573 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 PRUNE1Q86TP1 453 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 RSPH3Q86UC2 560 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 MAGEC3Q8TD91 643 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 SENP7Q9BQF6 1050 aa13.25□□□□□ -0.29
COMMD4-209ENST00000564068 NEMP1O14524 444 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 GIPC1O14908 333 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 ZBTB39O15060 712 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 KRT36O76013 467 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 KRT7P08729 469 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 SRGAP2CP0DJJ0 459 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 RBP3P10745 1247 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 CHKAP35790 457 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 PRAMEP78395 509 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 GPSM2P81274 684 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 RIPK1Q13546 671 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 GRAMD4Q6IC98 578 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 DPY19L2Q6NUT2 758 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 IRGCQ6NXR0 463 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 MFN1Q8IWA4 741 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 HEXIM2Q96MH2 286 aaKnown RBP13.24□□□□□ -0.29
COMMD4-209ENST00000564068 ANKRD27Q96NW4 1050 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 NDUFB10O96000 172 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 SSTR1P30872 391 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 BCAR1P56945 870 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 NPY5RQ15761 445 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 SLC15A2Q16348 729 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 IYDQ6PHW0 289 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 NIM1KQ8IY84 436 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 TCP10LQ8TDR4 215 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 ZNF75CPQ92670 426 aaPredicted RBP13.24□□□□□ -0.29
COMMD4-209ENST00000564068 ADPGKQ9BRR6 497 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 BTBD10Q9BSF8 475 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 TDRD3Q9H7E2 651 aaKnown RBP13.24□□□□□ -0.29
COMMD4-209ENST00000564068 SUGT1Q9Y2Z0 365 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 UBE4BO95155 1302 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 DPPA5A6NC42 116 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 C21orf2O43822 256 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 LCA5LO95447 670 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 GZMAP12544 262 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 TAL1P17542 331 aaPredicted RBP13.24□□□□□ -0.29
COMMD4-209ENST00000564068 ROR1Q01973 937 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 JADE1Q6IE81 842 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 C11orf63Q6NUN7 778 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 C16orf87Q6PH81 154 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 ENOSF1Q7L5Y1 443 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 CCNYL1Q8N7R7 359 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 FAM71DQ8N9W8 422 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 RBM46Q8TBY0 533 aaKnown RBP13.24□□□□□ -0.29
COMMD4-209ENST00000564068 RMDN2Q96LZ7 410 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 PAFAH2Q99487 392 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 AGAP1Q9UPQ3 857 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 LZTS1Q9Y250 596 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 XPO1O14980 1071 aaKnown RBP13.24□□□□□ -0.29
COMMD4-209ENST00000564068 NKRFO15226 690 aaKnown RBP eCLIP13.24□□□□□ -0.29
COMMD4-209ENST00000564068 SEC24DO94855 1032 aaPredicted RBP13.24□□□□□ -0.29
COMMD4-209ENST00000564068 ENO3P13929 434 aaPredicted RBP13.24□□□□□ -0.29
COMMD4-209ENST00000564068 PECAM1P16284 738 aaPredicted RBP13.24□□□□□ -0.29
COMMD4-209ENST00000564068 RPA3P35244 121 aaPredicted RBP13.24□□□□□ -0.29
COMMD4-209ENST00000564068 ROR2Q01974 943 aaKnown RBP13.24□□□□□ -0.29
COMMD4-209ENST00000564068 CYLC2Q14093 348 aaPredicted RBP13.24□□□□□ -0.29
COMMD4-209ENST00000564068 FAXCQ5TGI0 409 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 ZNF668Q96K58 619 aaPredicted RBP13.24□□□□□ -0.29
COMMD4-209ENST00000564068 IKZF4Q9H2S9 585 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 RIOX1Q9H6W3 641 aa13.24□□□□□ -0.29
COMMD4-209ENST00000564068 RNF103-CHMP3A0A140T963 221 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 GTPBP10A4D1E9 387 aaKnown RBP13.23□□□□□ -0.29
COMMD4-209ENST00000564068 RBAK-RBAKDNI3L0D1 243 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 PIK3R2O00459 728 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 RAD17O75943 681 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 MAP3K6O95382 1288 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 YY1P25490 414 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 RNF220Q5VTB9 566 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 ZNF720Q7Z2F6 126 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 FBXO36Q8NEA4 188 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 PIK3R5Q8WYR1 880 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 ZBBXA8MT70 800 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 FCHO1O14526 889 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 ZSCAN5DPP0CG00 497 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 KRT3P12035 628 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 SESTD1Q86VW0 696 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 LRRC6Q86X45 466 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 ARHGEF19Q8IW93 802 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 GPD1LQ8N335 351 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 GPRC5CQ9NQ84 441 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 DDX18Q9NVP1 670 aaKnown RBP13.23□□□□□ -0.29
COMMD4-209ENST00000564068 AHCYL1O43865 530 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 ATP6V1C1P21283 382 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 YWHABP31946 246 aaKnown RBP13.23□□□□□ -0.29
COMMD4-209ENST00000564068 DRG2P55039 364 aaKnown RBP13.23□□□□□ -0.29
COMMD4-209ENST00000564068 AQP5P55064 265 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 SESN2P58004 480 aaPredicted RBP13.23□□□□□ -0.29
COMMD4-209ENST00000564068 ECM1Q16610 540 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 KCNT1Q5JUK3 1230 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 PLA2G4FQ68DD2 849 aa13.23□□□□□ -0.29
COMMD4-209ENST00000564068 APLFQ8IW19 511 aaPredicted RBP13.23□□□□□ -0.29
COMMD4-209ENST00000564068 FAM13CQ8NE31 585 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms