RNA–Protein interactions for RNA: ENST00000563668.5

SPSB3-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,509 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-202ENST00000563668 COBLL1Q53SF7 1204 aa18.42■□□□□ 0.54
SPSB3-202ENST00000563668 DNTTIP2Q5QJE6 756 aaKnown RBP18.42■□□□□ 0.54
SPSB3-202ENST00000563668 VARS2Q5ST30 1063 aaKnown RBP18.42■□□□□ 0.54
SPSB3-202ENST00000563668 SPECC1LQ69YQ0 1117 aa18.42■□□□□ 0.54
SPSB3-202ENST00000563668 PCIF1Q9H4Z3 704 aa18.42■□□□□ 0.54
SPSB3-202ENST00000563668 EXOC1Q9NV70 894 aa18.42■□□□□ 0.54
SPSB3-202ENST00000563668 UBQLN1Q9UMX0 589 aaKnown RBP18.42■□□□□ 0.54
SPSB3-202ENST00000563668 NUB1Q9Y5A7 615 aa18.42■□□□□ 0.54
SPSB3-202ENST00000563668 CDY1Q9Y6F8 540 aa18.42■□□□□ 0.54
SPSB3-202ENST00000563668 PVALEFA0A1B0GWK0 134 aa18.41■□□□□ 0.54
SPSB3-202ENST00000563668 LRRC10BA6NIK2 292 aa18.41■□□□□ 0.54
SPSB3-202ENST00000563668 PBX1P40424 430 aa18.41■□□□□ 0.54
SPSB3-202ENST00000563668 PPP1R2P41236 205 aa18.41■□□□□ 0.54
SPSB3-202ENST00000563668 MTHFRP42898 656 aa18.41■□□□□ 0.54
SPSB3-202ENST00000563668 EPM2AIP1Q7L775 607 aaPredicted RBP18.41■□□□□ 0.54
SPSB3-202ENST00000563668 SYCP3Q8IZU3 236 aa18.41■□□□□ 0.54
SPSB3-202ENST00000563668 CCDC112Q8NEF3 446 aa18.41■□□□□ 0.54
SPSB3-202ENST00000563668 DHTKD1Q96HY7 919 aaPredicted RBP18.41■□□□□ 0.54
SPSB3-202ENST00000563668 SUSD3Q96L08 255 aa18.41■□□□□ 0.54
SPSB3-202ENST00000563668 RIPOR3Q96MK2 946 aa18.41■□□□□ 0.54
SPSB3-202ENST00000563668 FAM213AQ9BRX8 229 aa18.41■□□□□ 0.54
SPSB3-202ENST00000563668 LRRC27Q9C0I9 530 aa18.41■□□□□ 0.54
SPSB3-202ENST00000563668 TIMM13Q9Y5L4 95 aaPredicted RBP18.41■□□□□ 0.54
SPSB3-202ENST00000563668 MTCL1Q9Y4B5 1905 aaKnown RBP18.41■□□□□ 0.54
SPSB3-202ENST00000563668 PSMA7O14818 248 aa18.4■□□□□ 0.54
SPSB3-202ENST00000563668 SPTLC1O15269 473 aa18.4■□□□□ 0.54
SPSB3-202ENST00000563668 DCXO43602 365 aa18.4■□□□□ 0.54
SPSB3-202ENST00000563668 TRAPPC3O43617 180 aa18.4■□□□□ 0.54
SPSB3-202ENST00000563668 NRDCO43847 1150 aa18.4■□□□□ 0.54
SPSB3-202ENST00000563668 TBC1D4O60343 1298 aa18.4■□□□□ 0.54
SPSB3-202ENST00000563668 CYP3A5P20815 502 aa18.4■□□□□ 0.54
SPSB3-202ENST00000563668 RAB33AQ14088 237 aa18.4■□□□□ 0.54
SPSB3-202ENST00000563668 MRPL58Q14197 206 aaKnown RBP18.4■□□□□ 0.54
SPSB3-202ENST00000563668 EFCAB13Q8IY85 973 aa18.4■□□□□ 0.54
SPSB3-202ENST00000563668 CMASQ8NFW8 434 aaPredicted RBP18.4■□□□□ 0.54
SPSB3-202ENST00000563668 NECTIN4Q96NY8 510 aa18.4■□□□□ 0.54
SPSB3-202ENST00000563668 PLEKHA4Q9H4M7 779 aa18.4■□□□□ 0.54
SPSB3-202ENST00000563668 FBXW11Q9UKB1 542 aa18.4■□□□□ 0.54
SPSB3-202ENST00000563668 EXOC7Q9UPT5 735 aa18.4■□□□□ 0.54
SPSB3-202ENST00000563668 MAPK8IP1Q9UQF2 711 aa18.4■□□□□ 0.54
SPSB3-202ENST00000563668 CREMQ03060 361 aa18.39■□□□□ 0.54
SPSB3-202ENST00000563668 KRT31Q15323 416 aa18.39■□□□□ 0.54
SPSB3-202ENST00000563668 PTPN21Q16825 1174 aa18.39■□□□□ 0.54
SPSB3-202ENST00000563668 FILIP1LQ4L180 1135 aa18.39■□□□□ 0.54
SPSB3-202ENST00000563668 FAM26FQ5R3K3 315 aa18.39■□□□□ 0.54
SPSB3-202ENST00000563668 C15orf39Q6ZRI6 1047 aa18.39■□□□□ 0.54
SPSB3-202ENST00000563668 UNC13DQ70J99 1090 aa18.39■□□□□ 0.54
SPSB3-202ENST00000563668 CCAR2Q8N163 923 aaKnown RBP18.39■□□□□ 0.54
SPSB3-202ENST00000563668 BACE2Q9Y5Z0 518 aa18.39■□□□□ 0.54
SPSB3-202ENST00000563668 DOCK6Q96HP0 2047 aa18.39■□□□□ 0.53
SPSB3-202ENST00000563668 DENND4AQ7Z401 1863 aa18.39■□□□□ 0.53
SPSB3-202ENST00000563668 TULP1O00294 542 aaPredicted RBP18.39■□□□□ 0.53
SPSB3-202ENST00000563668 TEX33O43247 280 aa18.39■□□□□ 0.53
SPSB3-202ENST00000563668 TGFB1I1O43294 461 aa18.39■□□□□ 0.53
SPSB3-202ENST00000563668 N4BP1O75113 896 aaKnown RBP18.39■□□□□ 0.53
SPSB3-202ENST00000563668 ZMYND10O75800 440 aa18.39■□□□□ 0.53
SPSB3-202ENST00000563668 PAPLNO95428 1278 aa18.39■□□□□ 0.53
SPSB3-202ENST00000563668 C1RP00736 705 aa18.39■□□□□ 0.53
SPSB3-202ENST00000563668 AARSP49588 968 aaKnown RBP eCLIP18.39■□□□□ 0.53
SPSB3-202ENST00000563668 PMS1P54277 932 aaKnown RBP18.39■□□□□ 0.53
SPSB3-202ENST00000563668 ALCAMQ13740 583 aa18.39■□□□□ 0.53
SPSB3-202ENST00000563668 TMEM132DQ14C87 1099 aa18.39■□□□□ 0.53
SPSB3-202ENST00000563668 TCP11X2Q5H9J9 407 aa18.39■□□□□ 0.53
SPSB3-202ENST00000563668 C9orf57Q5W0N0 161 aa18.39■□□□□ 0.53
SPSB3-202ENST00000563668 TTI2Q6NXR4 508 aa18.39■□□□□ 0.53
SPSB3-202ENST00000563668 ANKS3Q6ZW76 656 aa18.39■□□□□ 0.53
SPSB3-202ENST00000563668 IRF2BP1Q8IU81 584 aa18.39■□□□□ 0.53
SPSB3-202ENST00000563668 CD302Q8IX05 232 aa18.39■□□□□ 0.53
SPSB3-202ENST00000563668 ZNF507Q8TCN5 953 aa18.39■□□□□ 0.53
SPSB3-202ENST00000563668 NOC3LQ8WTT2 800 aaKnown RBP18.39■□□□□ 0.53
SPSB3-202ENST00000563668 HDAC7Q8WUI4 952 aa18.39■□□□□ 0.53
SPSB3-202ENST00000563668 SCFD1Q8WVM8 642 aa18.39■□□□□ 0.53
SPSB3-202ENST00000563668 THAP9Q9H5L6 903 aa18.39■□□□□ 0.53
SPSB3-202ENST00000563668 ASB7Q9H672 318 aa18.39■□□□□ 0.53
SPSB3-202ENST00000563668 SLC39A2Q9NP94 309 aa18.39■□□□□ 0.53
SPSB3-202ENST00000563668 ANO9A1A5B4 782 aa18.38■□□□□ 0.53
SPSB3-202ENST00000563668 USP27XA6NNY8 438 aa18.38■□□□□ 0.53
SPSB3-202ENST00000563668 KCNJ18B7U540 433 aa18.38■□□□□ 0.53
SPSB3-202ENST00000563668 M0QZQ0 153 aa18.38■□□□□ 0.53
SPSB3-202ENST00000563668 PIRO00625 290 aa18.38■□□□□ 0.53
SPSB3-202ENST00000563668 SYN3O14994 580 aa18.38■□□□□ 0.53
SPSB3-202ENST00000563668 TPM2P07951 284 aa18.38■□□□□ 0.53
SPSB3-202ENST00000563668 GARTP22102 1010 aa18.38■□□□□ 0.53
SPSB3-202ENST00000563668 CCNE1P24864 410 aa18.38■□□□□ 0.53
SPSB3-202ENST00000563668 COPB1P53618 953 aaKnown RBP18.38■□□□□ 0.53
SPSB3-202ENST00000563668 ARPP19P56211 112 aa18.38■□□□□ 0.53
SPSB3-202ENST00000563668 ROR1Q01973 937 aa18.38■□□□□ 0.53
SPSB3-202ENST00000563668 STK4Q13043 487 aa18.38■□□□□ 0.53
SPSB3-202ENST00000563668 KCNJ12Q14500 433 aa18.38■□□□□ 0.53
SPSB3-202ENST00000563668 SLC8B1Q6J4K2 584 aa18.38■□□□□ 0.53
SPSB3-202ENST00000563668 PDXDC1Q6P996 788 aa18.38■□□□□ 0.53
SPSB3-202ENST00000563668 NELFCDQ8IXH7 590 aa18.38■□□□□ 0.53
SPSB3-202ENST00000563668 ANKRD20A12PQ8NF67 263 aa18.38■□□□□ 0.53
SPSB3-202ENST00000563668 BEST2Q8NFU1 509 aa18.38■□□□□ 0.53
SPSB3-202ENST00000563668 SMG7Q92540 1137 aaKnown RBP18.38■□□□□ 0.53
SPSB3-202ENST00000563668 LRFN3Q9BTN0 628 aa18.38■□□□□ 0.53
SPSB3-202ENST00000563668 PRKD2Q9BZL6 878 aa18.38■□□□□ 0.53
SPSB3-202ENST00000563668 SMOC2Q9H3U7 446 aa18.38■□□□□ 0.53
SPSB3-202ENST00000563668 TMEM206Q9H813 350 aa18.38■□□□□ 0.53
SPSB3-202ENST00000563668 RAPGEFL1Q9UHV5 662 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms