RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 VNN1O95497 513 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 C4BPAP04003 597 aaKnown RBP9.21□□□□□ -0.94
UBR1-204ENST00000563239 TMEM191BP0C7N4 346 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 RBP5P82980 135 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 ROR1Q01973 937 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 ADAM9Q13443 819 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 CTXN3Q4LDR2 81 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 RARS2Q5T160 578 aaKnown RBP9.21□□□□□ -0.94
UBR1-204ENST00000563239 TDRD10Q5VZ19 366 aaKnown RBP9.21□□□□□ -0.94
UBR1-204ENST00000563239 WSCD1Q658N2 575 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 CEP135Q66GS9 1140 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 DSTYKQ6XUX3 929 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 C15orf39Q6ZRI6 1047 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 LRRC52Q8N7C0 313 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 KREMEN2Q8NCW0 462 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 CMASQ8NFW8 434 aaPredicted RBP9.21□□□□□ -0.94
UBR1-204ENST00000563239 OR10T2Q8NGX3 314 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 TMC2Q8TDI7 906 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 ADAMTS19Q8TE59 1207 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 EEF2KMTQ96G04 330 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 ANKRD36BP1Q96IX9 119 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 MED15Q96RN5 788 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 TMEM209Q96SK2 561 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 DUSP9Q99956 384 aaKnown RBP9.21□□□□□ -0.94
UBR1-204ENST00000563239 GTPBP4Q9BZE4 634 aaKnown RBP9.21□□□□□ -0.94
UBR1-204ENST00000563239 PLEKHA4Q9H4M7 779 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 GDAP2Q9NXN4 497 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 TCF20Q9UGU0 1960 aaKnown RBP9.21□□□□□ -0.94
UBR1-204ENST00000563239 TRIOO75962 3097 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 C19orf67A6NJJ6 358 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 H7C4K7 107 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 ZMYND10O75800 440 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 SEC24AO95486 1093 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 TNNC2P02585 160 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 KRT19P08727 400 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 OR4Q2P0C623 313 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 SRGAP2BP0DMP2 458 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 ODC1P11926 461 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 TNNI1P19237 187 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 CCNE1P24864 410 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 PNPLA4P41247 253 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 YWHAHQ04917 246 aaPredicted RBP9.2□□□□□ -0.94
UBR1-204ENST00000563239 ZP2Q05996 745 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 ITIH3Q06033 890 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 PPP3CAQ08209 521 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 BFSP1Q12934 665 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 SV2CQ496J9 727 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 OVOS1Q6IE37 1185 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 ZNF280DQ6N043 979 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 TTI2Q6NXR4 508 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 TMC5Q6UXY8 1006 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 GPR149Q86SP6 731 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 OSTM1Q86WC4 334 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 FAM186BQ8IYM0 893 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 PDCL2Q8N4E4 241 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 ZNF461Q8TAF7 563 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 DHTKD1Q96HY7 919 aaPredicted RBP9.2□□□□□ -0.94
UBR1-204ENST00000563239 HPDLQ96IR7 371 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 ZNF560Q96MR9 790 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 GBP4Q96PP9 640 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 FNBP1Q96RU3 617 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 XYLT2Q9H1B5 865 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 CRISPLD1Q9H336 500 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 SFXN1Q9H9B4 322 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 L1RE1Q9UN81 338 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 FRMD4BQ9Y2L6 1034 aa9.2□□□□□ -0.94
UBR1-204ENST00000563239 MTCL1Q9Y4B5 1905 aaKnown RBP9.19□□□□□ -0.94
UBR1-204ENST00000563239 CCDC195A0A1B0GUA6 201 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 OR6C75A6NL08 312 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 GABRDO14764 452 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 IKBKBO14920 756 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 STAU1O95793 577 aaKnown RBP9.19□□□□□ -0.94
UBR1-204ENST00000563239 TRIM49P0CI25 452 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 TRIM49CP0CI26 452 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 ATF2P15336 505 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 RPL13P26373 211 aaKnown RBP9.19□□□□□ -0.94
UBR1-204ENST00000563239 PSMC2P35998 433 aaKnown RBP9.19□□□□□ -0.94
UBR1-204ENST00000563239 VAMP7P51809 220 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 ARPP19P56211 112 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 MYL6P60660 151 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 LRRC63Q05C16 580 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 ENPEPQ07075 957 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 CBX2Q14781 532 aaPredicted RBP9.19□□□□□ -0.94
UBR1-204ENST00000563239 SOWAHAQ2M3V2 549 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 ZACNQ401N2 412 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 FOXR2Q6PJQ5 311 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 RNF19BQ6ZMZ0 732 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 SV2AQ7L0J3 742 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 LRRTM3Q86VH5 581 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 ADHFE1Q8IWW8 467 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 TCEAL8Q8IYN2 117 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 TRIML1Q8N9V2 468 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 KBTBD7Q8WVZ9 684 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 NELFBQ8WX92 580 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 ELMO3Q96BJ8 720 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 UHRF1Q96T88 793 aaPredicted RBP9.19□□□□□ -0.94
UBR1-204ENST00000563239 MKNK1Q9BUB5 465 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 RHOBTB2Q9BYZ6 727 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 PRKD2Q9BZL6 878 aa9.19□□□□□ -0.94
UBR1-204ENST00000563239 POMKQ9H5K3 350 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms