RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 RMDN1Q96DB5 314 aa6.07□□□□□ -1.44
LINC01963-201ENST00000562038 ANKRD36BP1Q96IX9 119 aa6.07□□□□□ -1.44
LINC01963-201ENST00000562038 NECTIN4Q96NY8 510 aa6.07□□□□□ -1.44
LINC01963-201ENST00000562038 EMILIN2Q9BXX0 1053 aa6.07□□□□□ -1.44
LINC01963-201ENST00000562038 PLEKHA4Q9H4M7 779 aa6.07□□□□□ -1.44
LINC01963-201ENST00000562038 NUB1Q9Y5A7 615 aa6.07□□□□□ -1.44
LINC01963-201ENST00000562038 B4GALT5O43286 388 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 C4BPAP04003 597 aaKnown RBP6.06□□□□□ -1.44
LINC01963-201ENST00000562038 TBXAS1P24557 533 aaPredicted RBP6.06□□□□□ -1.44
LINC01963-201ENST00000562038 PPP3CCP48454 512 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 CASP5P51878 434 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 ZXDAP98168 799 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 STK4Q13043 487 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 SNRNP35Q16560 246 aaKnown RBP6.06□□□□□ -1.44
LINC01963-201ENST00000562038 DUOXA2Q1HG44 320 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 TSR1Q2NL82 804 aaKnown RBP6.06□□□□□ -1.44
LINC01963-201ENST00000562038 FIGNQ5HY92 759 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 C9orf57Q5W0N0 161 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 PPP2R2DQ66LE6 453 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 BEND5Q7L4P6 421 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 KSR1Q8IVT5 923 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 TRIM59Q8IWR1 403 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 PARD3BQ8TEW8 1205 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 PABPC5Q96DU9 382 aaKnown RBP6.06□□□□□ -1.44
LINC01963-201ENST00000562038 PKMYT1Q99640 499 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 PLCB1Q9NQ66 1216 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 TLR9Q9NR96 1032 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 ANKFY1Q9P2R3 1169 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 ADAM28Q9UKQ2 775 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 NPHP3-ACAD11A0A0J9YXS1 232 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 ANKRD63C9JTQ0 380 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 TK2O00142 265 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 SORBS3O60504 671 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 TNNC2P02585 160 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 ALDH2P05091 517 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 CCDC192P0DO97 292 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 ODC1P11926 461 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 DDX6P26196 483 aaKnown RBP eCLIP6.06□□□□□ -1.44
LINC01963-201ENST00000562038 LHX1P48742 406 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 RPL34P49207 117 aaKnown RBP6.06□□□□□ -1.44
LINC01963-201ENST00000562038 GCNT1Q02742 428 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 SIGLEC14Q08ET2 396 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 BFSP1Q12934 665 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 USP41Q3LFD5 358 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 DEFB128Q7Z7B8 93 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 GPT2Q8TD30 523 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 NXPE3Q969Y0 559 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 MSANTD3Q96H12 275 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 CENPOQ9BU64 300 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 MUC3BQ9H195 1237 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 PRDM12Q9H4Q4 367 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 RBAKQ9NYW8 714 aaPredicted RBP6.06□□□□□ -1.44
LINC01963-201ENST00000562038 LIMA1Q9UHB6 759 aaKnown RBP6.06□□□□□ -1.44
LINC01963-201ENST00000562038 DMGDHQ9UI17 866 aaKnown RBP6.06□□□□□ -1.44
LINC01963-201ENST00000562038 PTPRJQ12913 1337 aa6.06□□□□□ -1.44
LINC01963-201ENST00000562038 hCG_2014768A0A024R1R8 64 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 TBKBP1A7MCY6 615 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 SMTNL1A8MU46 457 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 ABLIM3O94929 683 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 ZNF18P17022 549 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 TRIM21P19474 475 aaKnown RBP6.05□□□□□ -1.44
LINC01963-201ENST00000562038 SCNN1AP37088 669 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 SLC11A1P49279 550 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 GLUD2P49448 558 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 TAF6P49848 677 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 ITIH3Q06033 890 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 MYO1EQ12965 1108 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 SGSM1Q2NKQ1 1148 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 LILRA6Q6PI73 481 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 CEP120Q8N960 986 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 VN1R2Q8NFZ6 395 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 POMGNT1Q8WZA1 660 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 TRMT2BQ96GJ1 504 aaKnown RBP6.05□□□□□ -1.44
LINC01963-201ENST00000562038 SPATA17Q96L03 361 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 NKX2-4Q9H2Z4 354 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 UBE2ZQ9H832 354 aaPredicted RBP6.05□□□□□ -1.44
LINC01963-201ENST00000562038 SLC28A3Q9HAS3 691 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 OBP2AQ9NY56 170 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 COMMD10Q9Y6G5 202 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 PRUNE2Q8WUY3 3088 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 A0A1W2PQC6 194 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 PODXLO00592 558 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 FGF18O76093 207 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 ACRP10323 421 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 KRT13P13646 458 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 RRM1P23921 792 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 PMLP29590 882 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 PRCPP42785 496 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 PDE6CP51160 858 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 GSCP56915 257 aaPredicted RBP6.05□□□□□ -1.44
LINC01963-201ENST00000562038 CEBPZQ03701 1054 aaKnown RBP6.05□□□□□ -1.44
LINC01963-201ENST00000562038 PTPN14Q15678 1187 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 SMAD2Q15796 467 aaKnown RBP6.05□□□□□ -1.44
LINC01963-201ENST00000562038 TCEAL8Q8IYN2 117 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 SYCP3Q8IZU3 236 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 MRPL43Q8N983 215 aaKnown RBP6.05□□□□□ -1.44
LINC01963-201ENST00000562038 HELQQ8TDG4 1101 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 BICD1Q96G01 975 aa6.05□□□□□ -1.44
LINC01963-201ENST00000562038 FAM193BQ96PV7 902 aaPredicted RBP6.05□□□□□ -1.44
LINC01963-201ENST00000562038 ACBD6Q9BR61 282 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms