RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 TBC1D7Q9P0N9 293 aa29.33■■■□□ 2.29
SNRPA1-215ENST00000561187 F5P12259 2224 aa29.33■■■□□ 2.29
SNRPA1-215ENST00000561187 GPR179Q6PRD1 2367 aa29.32■■■□□ 2.28
SNRPA1-215ENST00000561187 SCN1AP35498 2009 aa29.32■■■□□ 2.28
SNRPA1-215ENST00000561187 FANCMQ8IYD8 2048 aa29.32■■■□□ 2.28
SNRPA1-215ENST00000561187 MTMR11A4FU01 709 aa29.32■■■□□ 2.28
SNRPA1-215ENST00000561187 OR6C75A6NL08 312 aa29.32■■■□□ 2.28
SNRPA1-215ENST00000561187 TSSK4Q6SA08 328 aa29.32■■■□□ 2.28
SNRPA1-215ENST00000561187 ZNF852Q6ZMS4 543 aa29.32■■■□□ 2.28
SNRPA1-215ENST00000561187 KCNN1Q92952 543 aa29.32■■■□□ 2.28
SNRPA1-215ENST00000561187 SHISA7A6NL88 538 aa29.31■■■□□ 2.28
SNRPA1-215ENST00000561187 PTPAQ15257 358 aa29.31■■■□□ 2.28
SNRPA1-215ENST00000561187 TMC8Q8IU68 726 aa29.31■■■□□ 2.28
SNRPA1-215ENST00000561187 OR10T2Q8NGX3 314 aa29.31■■■□□ 2.28
SNRPA1-215ENST00000561187 DNASE1L2Q92874 299 aa29.31■■■□□ 2.28
SNRPA1-215ENST00000561187 CCSER1Q9C0I3 900 aa29.31■■■□□ 2.28
SNRPA1-215ENST00000561187 FOXD4L1Q9NU39 408 aa29.31■■■□□ 2.28
SNRPA1-215ENST00000561187 ZNF292O60281 2723 aa29.31■■■□□ 2.28
SNRPA1-215ENST00000561187 OTOGLQ3ZCN5 2332 aa29.3■■■□□ 2.28
SNRPA1-215ENST00000561187 MICAL2O94851 1124 aa29.3■■■□□ 2.28
SNRPA1-215ENST00000561187 ADRB2P07550 413 aa29.3■■■□□ 2.28
SNRPA1-215ENST00000561187 TYMPP19971 482 aa29.3■■■□□ 2.28
SNRPA1-215ENST00000561187 DDIT3P35638 169 aa29.3■■■□□ 2.28
SNRPA1-215ENST00000561187 ALDH1A3P47895 512 aa29.3■■■□□ 2.28
SNRPA1-215ENST00000561187 EPHB3P54753 998 aa29.3■■■□□ 2.28
SNRPA1-215ENST00000561187 EPHA5P54756 1037 aa29.3■■■□□ 2.28
SNRPA1-215ENST00000561187 GPR17Q13304 367 aa29.3■■■□□ 2.28
SNRPA1-215ENST00000561187 PLD1Q13393 1074 aa29.3■■■□□ 2.28
SNRPA1-215ENST00000561187 KIAA2013Q8IYS2 634 aa29.3■■■□□ 2.28
SNRPA1-215ENST00000561187 RSPRY1Q96DX4 576 aa29.3■■■□□ 2.28
SNRPA1-215ENST00000561187 OSBPL6Q9BZF3 934 aa29.3■■■□□ 2.28
SNRPA1-215ENST00000561187 ZNF334Q9HCZ1 680 aaPredicted RBP29.3■■■□□ 2.28
SNRPA1-215ENST00000561187 FBXO2Q9UK22 296 aaPredicted RBP29.3■■■□□ 2.28
SNRPA1-215ENST00000561187 AGO2Q9UKV8 859 aaKnown RBP29.3■■■□□ 2.28
SNRPA1-215ENST00000561187 MAFFQ9ULX9 164 aa29.3■■■□□ 2.28
SNRPA1-215ENST00000561187 GTF3C5Q9Y5Q8 519 aaPredicted RBP29.3■■■□□ 2.28
SNRPA1-215ENST00000561187 COL4A2P08572 1712 aa29.3■■■□□ 2.28
SNRPA1-215ENST00000561187 DMXL1Q9Y485 3027 aa29.3■■■□□ 2.28
SNRPA1-215ENST00000561187 PSMC3P17980 439 aa29.29■■■□□ 2.28
SNRPA1-215ENST00000561187 RESTQ13127 1097 aa29.29■■■□□ 2.28
SNRPA1-215ENST00000561187 CUL4AQ13619 759 aa29.29■■■□□ 2.28
SNRPA1-215ENST00000561187 CENPPQ6IPU0 288 aa29.29■■■□□ 2.28
SNRPA1-215ENST00000561187 ARMCX5Q6P1M9 558 aa29.29■■■□□ 2.28
SNRPA1-215ENST00000561187 CD302Q8IX05 232 aa29.29■■■□□ 2.28
SNRPA1-215ENST00000561187 DCLK2Q8N568 766 aa29.29■■■□□ 2.28
SNRPA1-215ENST00000561187 LEMD2Q8NC56 503 aa29.29■■■□□ 2.28
SNRPA1-215ENST00000561187 POMGNT1Q8WZA1 660 aa29.29■■■□□ 2.28
SNRPA1-215ENST00000561187 SEPT5Q99719 369 aaPredicted RBP29.29■■■□□ 2.28
SNRPA1-215ENST00000561187 LPIN3Q9BQK8 851 aa29.29■■■□□ 2.28
SNRPA1-215ENST00000561187 SEMA4AQ9H3S1 761 aa29.29■■■□□ 2.28
SNRPA1-215ENST00000561187 PIAS3Q9Y6X2 628 aa29.29■■■□□ 2.28
SNRPA1-215ENST00000561187 HEPACAM2A8MVW5 462 aa29.28■■■□□ 2.28
SNRPA1-215ENST00000561187 KINO60870 393 aaKnown RBP29.28■■■□□ 2.28
SNRPA1-215ENST00000561187 SCP2P22307 547 aa29.28■■■□□ 2.28
SNRPA1-215ENST00000561187 KCNA1Q09470 495 aa29.28■■■□□ 2.28
SNRPA1-215ENST00000561187 SLC39A12Q504Y0 691 aa29.28■■■□□ 2.28
SNRPA1-215ENST00000561187 FAM200AQ8TCP9 573 aa29.28■■■□□ 2.28
SNRPA1-215ENST00000561187 IRF7Q92985 503 aa29.28■■■□□ 2.28
SNRPA1-215ENST00000561187 PYM1Q9BRP8 204 aaKnown RBP29.28■■■□□ 2.28
SNRPA1-215ENST00000561187 LRRC3Q9BY71 257 aa29.28■■■□□ 2.28
SNRPA1-215ENST00000561187 OXCT2Q9BYC2 517 aaPredicted RBP29.28■■■□□ 2.28
SNRPA1-215ENST00000561187 MRPS17Q9Y2R5 130 aaKnown RBP29.28■■■□□ 2.28
SNRPA1-215ENST00000561187 PIRO00625 290 aa29.27■■■□□ 2.28
SNRPA1-215ENST00000561187 ID4P47928 161 aa29.27■■■□□ 2.28
SNRPA1-215ENST00000561187 MYBPC2Q14324 1141 aa29.27■■■□□ 2.28
SNRPA1-215ENST00000561187 EFCAB13Q8IY85 973 aa29.27■■■□□ 2.28
SNRPA1-215ENST00000561187 ZSWIM2Q8NEG5 633 aa29.27■■■□□ 2.28
SNRPA1-215ENST00000561187 FAM84AQ96KN4 292 aa29.27■■■□□ 2.28
SNRPA1-215ENST00000561187 MRPL44Q9H9J2 332 aaKnown RBP29.27■■■□□ 2.28
SNRPA1-215ENST00000561187 CCDC39Q9UFE4 941 aa29.27■■■□□ 2.28
SNRPA1-215ENST00000561187 TCHHQ07283 1943 aa29.27■■■□□ 2.28
SNRPA1-215ENST00000561187 MYMKA6NI61 221 aa29.26■■■□□ 2.27
SNRPA1-215ENST00000561187 ZNF263O14978 683 aa29.26■■■□□ 2.27
SNRPA1-215ENST00000561187 NCAM2O15394 837 aa29.26■■■□□ 2.27
SNRPA1-215ENST00000561187 MTAPQ13126 283 aa29.26■■■□□ 2.27
SNRPA1-215ENST00000561187 MGAT5BQ3V5L5 792 aa29.26■■■□□ 2.27
SNRPA1-215ENST00000561187 RRAGBQ5VZM2 374 aa29.26■■■□□ 2.27
SNRPA1-215ENST00000561187 ZNF720Q7Z2F6 126 aa29.26■■■□□ 2.27
SNRPA1-215ENST00000561187 NOC3LQ8WTT2 800 aaKnown RBP29.26■■■□□ 2.27
SNRPA1-215ENST00000561187 DEPDC1BQ8WUY9 529 aa29.26■■■□□ 2.27
SNRPA1-215ENST00000561187 CLDN23Q96B33 292 aa29.26■■■□□ 2.27
SNRPA1-215ENST00000561187 SAAL1Q96ER3 474 aa29.26■■■□□ 2.27
SNRPA1-215ENST00000561187 ATXN3LQ9H3M9 355 aa29.26■■■□□ 2.27
SNRPA1-215ENST00000561187 DPP3Q9NY33 737 aa29.26■■■□□ 2.27
SNRPA1-215ENST00000561187 STK17AQ9UEE5 414 aa29.26■■■□□ 2.27
SNRPA1-215ENST00000561187 FBXO4Q9UKT5 387 aa29.26■■■□□ 2.27
SNRPA1-215ENST00000561187 ANO9A1A5B4 782 aa29.25■■■□□ 2.27
SNRPA1-215ENST00000561187 CYB561D2O14569 222 aa29.25■■■□□ 2.27
SNRPA1-215ENST00000561187 PDCP20941 246 aa29.25■■■□□ 2.27
SNRPA1-215ENST00000561187 TXLNAP40222 546 aa29.25■■■□□ 2.27
SNRPA1-215ENST00000561187 WNT7BP56706 349 aa29.25■■■□□ 2.27
SNRPA1-215ENST00000561187 FZD5Q13467 585 aa29.25■■■□□ 2.27
SNRPA1-215ENST00000561187 SLFN12LQ6IEE8 588 aa29.25■■■□□ 2.27
SNRPA1-215ENST00000561187 YAF2Q8IY57 180 aa29.25■■■□□ 2.27
SNRPA1-215ENST00000561187 TTC8Q8TAM2 541 aa29.25■■■□□ 2.27
SNRPA1-215ENST00000561187 FAM3CQ92520 227 aa29.25■■■□□ 2.27
SNRPA1-215ENST00000561187 TSPAN18Q96SJ8 248 aa29.25■■■□□ 2.27
SNRPA1-215ENST00000561187 NELL2Q99435 816 aa29.25■■■□□ 2.27
SNRPA1-215ENST00000561187 PANK2Q9BZ23 570 aa29.25■■■□□ 2.27
SNRPA1-215ENST00000561187 ASB7Q9H672 318 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms