RNA–Protein interactions for RNA: ENST00000561152.1

TCF12-222, Transcript of transcription factor 12, human

TSL 5

Gene TCF12, Length 675 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-222	ENST00000561152	NUP62CL	Q9H1M0	184 aa		27.75	■■■□□ 2.03
TCF12-222	ENST00000561152	OR6C75	A6NL08	312 aa		27.74	■■■□□ 2.03
TCF12-222	ENST00000561152	LRRIQ3	A6PVS8	624 aa	Predicted RBP	27.74	■■■□□ 2.03
TCF12-222	ENST00000561152	IKBKB	O14920	756 aa		27.74	■■■□□ 2.03
TCF12-222	ENST00000561152	PHACTR2	O75167	634 aa		27.74	■■■□□ 2.03
TCF12-222	ENST00000561152	SPATA31D3	P0C874	917 aa		27.74	■■■□□ 2.03
TCF12-222	ENST00000561152	TRPC3	Q13507	836 aa		27.74	■■■□□ 2.03
TCF12-222	ENST00000561152	RSPO2	Q6UXX9	243 aa	Predicted RBP	27.74	■■■□□ 2.03
TCF12-222	ENST00000561152	SPATA31D4	Q6ZUB0	917 aa		27.74	■■■□□ 2.03
TCF12-222	ENST00000561152	CMAS	Q8NFW8	434 aa	Predicted RBP	27.74	■■■□□ 2.03
TCF12-222	ENST00000561152	ADAMTS19	Q8TE59	1207 aa		27.74	■■■□□ 2.03
TCF12-222	ENST00000561152	BORCS6	Q96GS4	357 aa		27.74	■■■□□ 2.03
TCF12-222	ENST00000561152	HPDL	Q96IR7	371 aa		27.74	■■■□□ 2.03
TCF12-222	ENST00000561152	FAM84A	Q96KN4	292 aa		27.74	■■■□□ 2.03
TCF12-222	ENST00000561152	RIPOR3	Q96MK2	946 aa		27.74	■■■□□ 2.03
TCF12-222	ENST00000561152	NECTIN4	Q96NY8	510 aa		27.74	■■■□□ 2.03
TCF12-222	ENST00000561152	APOL5	Q9BWW9	433 aa		27.74	■■■□□ 2.03
TCF12-222	ENST00000561152	GZF1	Q9H116	711 aa	Predicted RBP	27.74	■■■□□ 2.03
TCF12-222	ENST00000561152	ZDHHC7	Q9NXF8	308 aa		27.74	■■■□□ 2.03
TCF12-222	ENST00000561152	GDAP2	Q9NXN4	497 aa		27.74	■■■□□ 2.03
TCF12-222	ENST00000561152	PRKAG3	Q9UGI9	489 aa		27.74	■■■□□ 2.03
TCF12-222	ENST00000561152	TCF20	Q9UGU0	1960 aa	Known RBP	27.73	■■■□□ 2.03
TCF12-222	ENST00000561152	BICDL2	A1A5D9	508 aa		27.73	■■■□□ 2.03
TCF12-222	ENST00000561152	HUS1	O60921	280 aa		27.73	■■■□□ 2.03
TCF12-222	ENST00000561152	EPB41	P11171	864 aa	Known RBP	27.73	■■■□□ 2.03
TCF12-222	ENST00000561152	MTHFR	P42898	656 aa		27.73	■■■□□ 2.03
TCF12-222	ENST00000561152	VAMP7	P51809	220 aa		27.73	■■■□□ 2.03
TCF12-222	ENST00000561152	ARPP19	P56211	112 aa		27.73	■■■□□ 2.03
TCF12-222	ENST00000561152	ROR1	Q01973	937 aa		27.73	■■■□□ 2.03
TCF12-222	ENST00000561152	TPGS2	Q68CL5	300 aa		27.73	■■■□□ 2.03
TCF12-222	ENST00000561152	ANKRD40	Q6AI12	368 aa		27.73	■■■□□ 2.03
TCF12-222	ENST00000561152	CYP26C1	Q6V0L0	522 aa		27.73	■■■□□ 2.03
TCF12-222	ENST00000561152	C15orf39	Q6ZRI6	1047 aa		27.73	■■■□□ 2.03
TCF12-222	ENST00000561152	RTL10	Q7L3V2	364 aa		27.73	■■■□□ 2.03
TCF12-222	ENST00000561152	THEM5	Q8N1Q8	247 aa		27.73	■■■□□ 2.03
TCF12-222	ENST00000561152	C12orf76	Q8N812	135 aa	Predicted RBP	27.73	■■■□□ 2.03
TCF12-222	ENST00000561152	ZNF461	Q8TAF7	563 aa		27.73	■■■□□ 2.03
TCF12-222	ENST00000561152	PLEKHO2	Q8TD55	490 aa		27.73	■■■□□ 2.03
TCF12-222	ENST00000561152	SUSD6	Q92537	303 aa		27.73	■■■□□ 2.03
TCF12-222	ENST00000561152	TSC2	P49815	1807 aa		27.72	■■■□□ 2.03
TCF12-222	ENST00000561152	CPB1	P15086	417 aa		27.72	■■■□□ 2.03
TCF12-222	ENST00000561152	BMP6	P22004	513 aa		27.72	■■■□□ 2.03
TCF12-222	ENST00000561152	ELF1	P32519	619 aa		27.72	■■■□□ 2.03
TCF12-222	ENST00000561152	BIRC3	Q13489	604 aa		27.72	■■■□□ 2.03
TCF12-222	ENST00000561152	CBX2	Q14781	532 aa	Predicted RBP	27.72	■■■□□ 2.03
TCF12-222	ENST00000561152	UVSSA	Q2YD98	709 aa		27.72	■■■□□ 2.03
TCF12-222	ENST00000561152	ATAT1	Q5SQI0	421 aa		27.72	■■■□□ 2.03
TCF12-222	ENST00000561152	FOXR2	Q6PJQ5	311 aa		27.72	■■■□□ 2.03
TCF12-222	ENST00000561152	TMC5	Q6UXY8	1006 aa		27.72	■■■□□ 2.03
TCF12-222	ENST00000561152	CCDC149	Q6ZUS6	474 aa		27.72	■■■□□ 2.03
TCF12-222	ENST00000561152	TMEM86A	Q8N2M4	240 aa		27.72	■■■□□ 2.03
TCF12-222	ENST00000561152	ZNF516	Q92618	1163 aa		27.72	■■■□□ 2.03
TCF12-222	ENST00000561152	MAFF	Q9ULX9	164 aa		27.72	■■■□□ 2.03
TCF12-222	ENST00000561152	SNX9	Q9Y5X1	595 aa		27.72	■■■□□ 2.03
TCF12-222	ENST00000561152	PPP1R3G	B7ZBB8	358 aa		27.71	■■■□□ 2.03
TCF12-222	ENST00000561152	SLC16A3	O15427	465 aa	Known RBP	27.71	■■■□□ 2.03
TCF12-222	ENST00000561152	CD44	P16070	742 aa	Known RBP	27.71	■■■□□ 2.03
TCF12-222	ENST00000561152	ATIC	P31939	592 aa		27.71	■■■□□ 2.03
TCF12-222	ENST00000561152	KLHL10	Q6JEL2	608 aa		27.71	■■■□□ 2.03
TCF12-222	ENST00000561152	TOP6BL	Q8N6T0	577 aa		27.71	■■■□□ 2.03
TCF12-222	ENST00000561152	SPATA18	Q8TC71	538 aa		27.71	■■■□□ 2.03
TCF12-222	ENST00000561152	SYAP1	Q96A49	352 aa	Predicted RBP	27.71	■■■□□ 2.03
TCF12-222	ENST00000561152	RHOBTB2	Q9BYZ6	727 aa		27.71	■■■□□ 2.03
TCF12-222	ENST00000561152	CCDC195	A0A1B0GUA6	201 aa		27.7	■■■□□ 2.02
TCF12-222	ENST00000561152	WDR27	A2RRH5	827 aa		27.7	■■■□□ 2.02
TCF12-222	ENST00000561152	TRIM49B	A6NDI0	452 aa		27.7	■■■□□ 2.02
TCF12-222	ENST00000561152	ZMYND10	O75800	440 aa		27.7	■■■□□ 2.02
TCF12-222	ENST00000561152	ABLIM3	O94929	683 aa		27.7	■■■□□ 2.02
TCF12-222	ENST00000561152	MBD3	O95983	291 aa		27.7	■■■□□ 2.02
TCF12-222	ENST00000561152	C8A	P07357	584 aa		27.7	■■■□□ 2.02
TCF12-222	ENST00000561152	PMS1	P54277	932 aa	Known RBP	27.7	■■■□□ 2.02
TCF12-222	ENST00000561152	DLG4	P78352	724 aa		27.7	■■■□□ 2.02
TCF12-222	ENST00000561152	PPM1L	Q5SGD2	360 aa		27.7	■■■□□ 2.02
TCF12-222	ENST00000561152	WSCD1	Q658N2	575 aa		27.7	■■■□□ 2.02
TCF12-222	ENST00000561152	DPH6	Q7L8W6	267 aa		27.7	■■■□□ 2.02
TCF12-222	ENST00000561152	GPR149	Q86SP6	731 aa		27.7	■■■□□ 2.02
TCF12-222	ENST00000561152	ZC3H3	Q8IXZ2	948 aa	Known RBP	27.7	■■■□□ 2.02
TCF12-222	ENST00000561152	NELFB	Q8WX92	580 aa		27.7	■■■□□ 2.02
TCF12-222	ENST00000561152	UHRF1	Q96T88	793 aa	Predicted RBP	27.7	■■■□□ 2.02
TCF12-222	ENST00000561152	STAU1	O95793	577 aa	Known RBP	27.69	■■■□□ 2.02
TCF12-222	ENST00000561152	CST3	P01034	146 aa	Predicted RBP	27.69	■■■□□ 2.02
TCF12-222	ENST00000561152	C4BPA	P04003	597 aa	Known RBP	27.69	■■■□□ 2.02
TCF12-222	ENST00000561152	HNRNPA1	P09651	372 aa	Known RBP eCLIP	27.69	■■■□□ 2.02
TCF12-222	ENST00000561152	ATF2	P15336	505 aa		27.69	■■■□□ 2.02
TCF12-222	ENST00000561152	HOXA9	P31269	272 aa		27.69	■■■□□ 2.02
TCF12-222	ENST00000561152	PAK1	Q13153	545 aa		27.69	■■■□□ 2.02
TCF12-222	ENST00000561152	TDRD10	Q5VZ19	366 aa	Known RBP	27.69	■■■□□ 2.02
TCF12-222	ENST00000561152	CEP63	Q96MT8	703 aa		27.69	■■■□□ 2.02
TCF12-222	ENST00000561152	AFF4	Q9UHB7	1163 aa	Known RBP	27.69	■■■□□ 2.02
TCF12-222	ENST00000561152	CTNND2	Q9UQB3	1225 aa		27.69	■■■□□ 2.02
TCF12-222	ENST00000561152	STX10	O60499	249 aa		27.68	■■■□□ 2.02
TCF12-222	ENST00000561152	PAPLN	O95428	1278 aa		27.68	■■■□□ 2.02
TCF12-222	ENST00000561152	ZACN	Q401N2	412 aa		27.68	■■■□□ 2.02
TCF12-222	ENST00000561152	ADHFE1	Q8IWW8	467 aa		27.68	■■■□□ 2.02
TCF12-222	ENST00000561152	PDCL2	Q8N4E4	241 aa		27.68	■■■□□ 2.02
TCF12-222	ENST00000561152	SLC7A14	Q8TBB6	771 aa		27.68	■■■□□ 2.02
TCF12-222	ENST00000561152	EEF2KMT	Q96G04	330 aa		27.68	■■■□□ 2.02
TCF12-222	ENST00000561152	PHF7	Q9BWX1	381 aa	Predicted RBP	27.68	■■■□□ 2.02
TCF12-222	ENST00000561152	PRKD2	Q9BZL6	878 aa		27.68	■■■□□ 2.02
TCF12-222	ENST00000561152	L1RE1	Q9UN81	338 aa		27.68	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms