RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 GOLPH3LQ9H4A5 285 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 ZHX3Q9H4I2 956 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 BRD9Q9H8M2 597 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 CYP4F11Q9HBI6 524 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 ZSCAN32Q9NX65 697 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 DLL3Q9NYJ7 618 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 LARSQ9P2J5 1176 aaKnown RBP11.67□□□□□ -0.54
TPM1-227ENST00000560970 FBXL5Q9UKA1 691 aa11.67□□□□□ -0.54
TPM1-227ENST00000560970 GPR179Q6PRD1 2367 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 A0A1B0GVL5 298 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 FRMD3A2A2Y4 597 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 TRAK2O60296 914 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 LILRB5O75023 590 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 CPB1P15086 417 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 PFKFB1P16118 471 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 CASP1P29466 404 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 ARPP19P56211 112 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 ADCY1Q08828 1119 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 STRN3Q13033 797 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 FAM78AQ5JUQ0 283 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 TANGO2Q6ICL3 276 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 HAUS6Q7Z4H7 955 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 GRAMD1CQ8IYS0 662 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 DCLK2Q8N568 766 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 DEPDC1BQ8WUY9 529 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 ATRIPQ8WXE1 791 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 NELL1Q92832 810 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 KCNN1Q92952 543 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 C18orf25Q96B23 403 aaPredicted RBP11.66□□□□□ -0.54
TPM1-227ENST00000560970 TCEAL4Q96EI5 215 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 ZBTB45Q96K62 511 aaPredicted RBP11.66□□□□□ -0.54
TPM1-227ENST00000560970 ASB16Q96NS5 453 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 FAM126AQ9BYI3 521 aaPredicted RBP11.66□□□□□ -0.54
TPM1-227ENST00000560970 PLA2G2FQ9BZM2 168 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 TNMDQ9H2S6 317 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 IKZF4Q9H2S9 585 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 CHRDQ9H2X0 955 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 ZFP14Q9HCL3 533 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 ASAH2Q9NR71 780 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 KBTBD4Q9NVX7 518 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 TUBGCP4Q9UGJ1 667 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 HPSEQ9Y251 543 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 ATP6V1DQ9Y5K8 247 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.66□□□□□ -0.54
TPM1-227ENST00000560970 NCOR2Q9Y618 2525 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 F5P12259 2224 aa11.66□□□□□ -0.54
TPM1-227ENST00000560970 MAN2B1O00754 1011 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 MEFVO15553 781 aaPredicted RBP11.65□□□□□ -0.54
TPM1-227ENST00000560970 ACTN4O43707 911 aaKnown RBP11.65□□□□□ -0.54
TPM1-227ENST00000560970 TOM1L1O75674 476 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 PPP1R37O75864 691 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 SEC24AO95486 1093 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 CCR2P41597 374 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 CASP5P51878 434 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 SMTNP53814 917 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 EPHA5P54756 1037 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 LMNB2Q03252 620 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 TWF1Q12792 350 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 MRPL58Q14197 206 aaKnown RBP11.65□□□□□ -0.54
TPM1-227ENST00000560970 PPP2R5DQ14738 602 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 ZC2HC1CQ53FD0 456 aaPredicted RBP11.65□□□□□ -0.54
TPM1-227ENST00000560970 ADALQ6DHV7 355 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 IQCEQ6IPM2 695 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 SLC39A4Q6P5W5 647 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 POTEHQ6S545 545 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 VITQ6UXI7 678 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 GPR161Q8N6U8 529 aaKnown RBP11.65□□□□□ -0.54
TPM1-227ENST00000560970 APPL2Q8NEU8 664 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 SMARCD2Q92925 531 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 IRF7Q92985 503 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 TCHPQ9BT92 498 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 TRMT61BQ9BVS5 477 aaKnown RBP11.65□□□□□ -0.54
TPM1-227ENST00000560970 TRIM9Q9C026 710 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 SCAND2PQ9GZW5 306 aaPredicted RBP11.65□□□□□ -0.54
TPM1-227ENST00000560970 CUEDC2Q9H467 287 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 FAM13BQ9NYF5 915 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 TBC1D7Q9P0N9 293 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 AFF4Q9UHB7 1163 aaKnown RBP11.65□□□□□ -0.54
TPM1-227ENST00000560970 SERTAD1Q9UHV2 236 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 MAFFQ9ULX9 164 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 NDRG2Q9UN36 371 aaKnown RBP11.65□□□□□ -0.54
TPM1-227ENST00000560970 PCDHB8Q9UN66 801 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 YIPF1Q9Y548 306 aa11.65□□□□□ -0.54
TPM1-227ENST00000560970 NCANO14594 1321 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 KMT2BQ9UMN6 2715 aaPredicted RBP11.64□□□□□ -0.55
TPM1-227ENST00000560970 FAM237AA0A1B0GTK4 181 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 SHISA7A6NL88 538 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 TISP43B9A030 160 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 PIGRP01833 764 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 CXCL8P10145 99 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 IDEP14735 1019 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 PSMC3P17980 439 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 CMA1P23946 247 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 NDUFA8P51970 172 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 GTF2BQ00403 316 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 YWHAHQ04917 246 aaPredicted RBP11.64□□□□□ -0.55
TPM1-227ENST00000560970 MTAPQ13126 283 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 PLD1Q13393 1074 aa11.64□□□□□ -0.55
TPM1-227ENST00000560970 RSPO4Q2I0M5 234 aaPredicted RBP11.64□□□□□ -0.55
TPM1-227ENST00000560970 CYP4A22Q5TCH4 519 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms