RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 PTPN21Q16825 1174 aa13.99□□□□□ -0.17
CTDSPL2-209ENST00000560620 DUOXA2Q1HG44 320 aa13.99□□□□□ -0.17
CTDSPL2-209ENST00000560620 BMT2Q1RMZ1 405 aa13.99□□□□□ -0.17
CTDSPL2-209ENST00000560620 TPGS2Q68CL5 300 aa13.99□□□□□ -0.17
CTDSPL2-209ENST00000560620 RNF19BQ6ZMZ0 732 aa13.99□□□□□ -0.17
CTDSPL2-209ENST00000560620 THEM5Q8N1Q8 247 aa13.99□□□□□ -0.17
CTDSPL2-209ENST00000560620 ELMOD1Q8N336 334 aa13.99□□□□□ -0.17
CTDSPL2-209ENST00000560620 C1orf127Q8N9H9 656 aa13.99□□□□□ -0.17
CTDSPL2-209ENST00000560620 KIAA0895Q8NCT3 520 aa13.99□□□□□ -0.17
CTDSPL2-209ENST00000560620 FAM84AQ96KN4 292 aa13.99□□□□□ -0.17
CTDSPL2-209ENST00000560620 MAPK8IP1Q9UQF2 711 aa13.99□□□□□ -0.17
CTDSPL2-209ENST00000560620 SCN1AP35498 2009 aa13.98□□□□□ -0.17
CTDSPL2-209ENST00000560620 DENND4AQ7Z401 1863 aa13.98□□□□□ -0.17
CTDSPL2-209ENST00000560620 TBC1D4O60343 1298 aa13.98□□□□□ -0.17
CTDSPL2-209ENST00000560620 HUS1O60921 280 aa13.98□□□□□ -0.17
CTDSPL2-209ENST00000560620 ABLIM3O94929 683 aa13.98□□□□□ -0.17
CTDSPL2-209ENST00000560620 CDR1P51861 262 aa13.98□□□□□ -0.17
CTDSPL2-209ENST00000560620 RBP5P82980 135 aa13.98□□□□□ -0.17
CTDSPL2-209ENST00000560620 MYO1EQ12965 1108 aa13.98□□□□□ -0.17
CTDSPL2-209ENST00000560620 MTMR3Q13615 1198 aa13.98□□□□□ -0.17
CTDSPL2-209ENST00000560620 RTL10Q7L3V2 364 aa13.98□□□□□ -0.17
CTDSPL2-209ENST00000560620 WDR49Q8IV35 697 aa13.98□□□□□ -0.17
CTDSPL2-209ENST00000560620 ZDHHC14Q8IZN3 488 aa13.98□□□□□ -0.17
CTDSPL2-209ENST00000560620 EDAQ92838 391 aa13.98□□□□□ -0.17
CTDSPL2-209ENST00000560620 RHOBTB2Q9BYZ6 727 aa13.98□□□□□ -0.17
CTDSPL2-209ENST00000560620 INTS13Q9NVM9 706 aa13.98□□□□□ -0.17
CTDSPL2-209ENST00000560620 HCFC1R1Q9NWW0 138 aa13.98□□□□□ -0.17
CTDSPL2-209ENST00000560620 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.98□□□□□ -0.17
CTDSPL2-209ENST00000560620 AFF4Q9UHB7 1163 aaKnown RBP13.98□□□□□ -0.17
CTDSPL2-209ENST00000560620 HOOK1Q9UJC3 728 aaKnown RBP13.98□□□□□ -0.17
CTDSPL2-209ENST00000560620 SORCS3Q9UPU3 1222 aa13.98□□□□□ -0.17
CTDSPL2-209ENST00000560620 INSL5Q9Y5Q6 135 aa13.98□□□□□ -0.17
CTDSPL2-209ENST00000560620 CALUO43852 315 aaPredicted RBP13.97□□□□□ -0.17
CTDSPL2-209ENST00000560620 GPR37L1O60883 481 aa13.97□□□□□ -0.17
CTDSPL2-209ENST00000560620 RHOBTB3O94955 611 aa13.97□□□□□ -0.17
CTDSPL2-209ENST00000560620 SEC24AO95486 1093 aa13.97□□□□□ -0.17
CTDSPL2-209ENST00000560620 ZXDAP98168 799 aa13.97□□□□□ -0.17
CTDSPL2-209ENST00000560620 FAM160A1Q05DH4 1040 aa13.97□□□□□ -0.17
CTDSPL2-209ENST00000560620 CYP24A1Q07973 514 aa13.97□□□□□ -0.17
CTDSPL2-209ENST00000560620 TWF1Q12792 350 aa13.97□□□□□ -0.17
CTDSPL2-209ENST00000560620 PNOCQ13519 176 aa13.97□□□□□ -0.17
CTDSPL2-209ENST00000560620 PABPC1LQ4VXU2 614 aaKnown RBP13.97□□□□□ -0.17
CTDSPL2-209ENST00000560620 SLC39A12Q504Y0 691 aa13.97□□□□□ -0.17
CTDSPL2-209ENST00000560620 WSCD1Q658N2 575 aa13.97□□□□□ -0.17
CTDSPL2-209ENST00000560620 IQCEQ6IPM2 695 aa13.97□□□□□ -0.17
CTDSPL2-209ENST00000560620 TCEAL8Q8IYN2 117 aa13.97□□□□□ -0.17
CTDSPL2-209ENST00000560620 FMR1NBQ8N0W7 255 aaPredicted RBP13.97□□□□□ -0.17
CTDSPL2-209ENST00000560620 LRRC52Q8N7C0 313 aa13.97□□□□□ -0.17
CTDSPL2-209ENST00000560620 OR5B17Q8NGF7 314 aa13.97□□□□□ -0.17
CTDSPL2-209ENST00000560620 CORO1BQ9BR76 489 aa13.97□□□□□ -0.17
CTDSPL2-209ENST00000560620 LRFN3Q9BTN0 628 aa13.97□□□□□ -0.17
CTDSPL2-209ENST00000560620 CIZ1Q9ULV3 898 aaPredicted RBP13.97□□□□□ -0.17
CTDSPL2-209ENST00000560620 SNX9Q9Y5X1 595 aa13.97□□□□□ -0.17
CTDSPL2-209ENST00000560620 PTPRJQ12913 1337 aa13.96□□□□□ -0.17
CTDSPL2-209ENST00000560620 PDXKO00764 312 aa13.96□□□□□ -0.17
CTDSPL2-209ENST00000560620 N4BP1O75113 896 aaKnown RBP13.96□□□□□ -0.17
CTDSPL2-209ENST00000560620 PHACTR2O75167 634 aa13.96□□□□□ -0.17
CTDSPL2-209ENST00000560620 PRPF40AO75400 957 aaKnown RBP13.96□□□□□ -0.17
CTDSPL2-209ENST00000560620 CYP11A1P05108 521 aa13.96□□□□□ -0.17
CTDSPL2-209ENST00000560620 PTPN2P17706 415 aa13.96□□□□□ -0.17
CTDSPL2-209ENST00000560620 DUSP4Q13115 394 aa13.96□□□□□ -0.17
CTDSPL2-209ENST00000560620 GPR17Q13304 367 aa13.96□□□□□ -0.17
CTDSPL2-209ENST00000560620 MYBPC2Q14324 1141 aa13.96□□□□□ -0.17
CTDSPL2-209ENST00000560620 PSMD6Q15008 389 aa13.96□□□□□ -0.17
CTDSPL2-209ENST00000560620 CEP135Q66GS9 1140 aa13.96□□□□□ -0.17
CTDSPL2-209ENST00000560620 C12orf56Q8IXR9 622 aa13.96□□□□□ -0.17
CTDSPL2-209ENST00000560620 ING5Q8WYH8 240 aa13.96□□□□□ -0.17
CTDSPL2-209ENST00000560620 HPDLQ96IR7 371 aa13.96□□□□□ -0.17
CTDSPL2-209ENST00000560620 ZNF512Q96ME7 567 aaPredicted RBP13.96□□□□□ -0.17
CTDSPL2-209ENST00000560620 MYADMQ96S97 322 aa13.96□□□□□ -0.17
CTDSPL2-209ENST00000560620 TMEM209Q96SK2 561 aa13.96□□□□□ -0.17
CTDSPL2-209ENST00000560620 CGRRF1Q99675 332 aa13.96□□□□□ -0.17
CTDSPL2-209ENST00000560620 RMND1Q9NWS8 449 aa13.96□□□□□ -0.17
CTDSPL2-209ENST00000560620 DNMT3BQ9UBC3 853 aaKnown RBP13.96□□□□□ -0.17
CTDSPL2-209ENST00000560620 FRMD4BQ9Y2L6 1034 aa13.96□□□□□ -0.17
CTDSPL2-209ENST00000560620 SLC27A5Q9Y2P5 690 aa13.96□□□□□ -0.17
CTDSPL2-209ENST00000560620 PRR33A8MZF0 331 aa13.95□□□□□ -0.18
CTDSPL2-209ENST00000560620 SMC2O95347 1197 aa13.95□□□□□ -0.18
CTDSPL2-209ENST00000560620 NR3C1P04150 777 aa13.95□□□□□ -0.18
CTDSPL2-209ENST00000560620 RHOP08100 348 aa13.95□□□□□ -0.18
CTDSPL2-209ENST00000560620 ALDH1A3P47895 512 aa13.95□□□□□ -0.18
CTDSPL2-209ENST00000560620 BIRC3Q13489 604 aa13.95□□□□□ -0.18
CTDSPL2-209ENST00000560620 TRPC3Q13507 836 aa13.95□□□□□ -0.18
CTDSPL2-209ENST00000560620 KCNB1Q14721 858 aa13.95□□□□□ -0.18
CTDSPL2-209ENST00000560620 CYP4A22Q5TCH4 519 aa13.95□□□□□ -0.18
CTDSPL2-209ENST00000560620 TRIM67Q6ZTA4 783 aa13.95□□□□□ -0.18
CTDSPL2-209ENST00000560620 TRAPPC11Q7Z392 1133 aa13.95□□□□□ -0.18
CTDSPL2-209ENST00000560620 ST13P5Q8NFI4 369 aaPredicted RBP13.95□□□□□ -0.18
CTDSPL2-209ENST00000560620 MMS19Q96T76 1030 aa13.95□□□□□ -0.18
CTDSPL2-209ENST00000560620 SEPT5Q99719 369 aaPredicted RBP13.95□□□□□ -0.18
CTDSPL2-209ENST00000560620 KCTD10Q9H3F6 313 aa13.95□□□□□ -0.18
CTDSPL2-209ENST00000560620 KCNK12Q9HB15 430 aa13.95□□□□□ -0.18
CTDSPL2-209ENST00000560620 C11orf16Q9NQ32 467 aa13.95□□□□□ -0.18
CTDSPL2-209ENST00000560620 CHMP5Q9NZZ3 219 aa13.95□□□□□ -0.18
CTDSPL2-209ENST00000560620 SIX4Q9UIU6 781 aa13.95□□□□□ -0.18
CTDSPL2-209ENST00000560620 MAFFQ9ULX9 164 aa13.95□□□□□ -0.18
CTDSPL2-209ENST00000560620 MRPS23Q9Y3D9 190 aaKnown RBP13.95□□□□□ -0.18
CTDSPL2-209ENST00000560620 MYO10Q9HD67 2058 aa13.95□□□□□ -0.18
CTDSPL2-209ENST00000560620 MTMR11A4FU01 709 aa13.94□□□□□ -0.18
CTDSPL2-209ENST00000560620 TMEM221A6NGB7 291 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms