RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 MCM3APO60318 1980 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 PTPRJQ12913 1337 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 UMODL1Q5DID0 1318 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 ZBTB42B2RXF5 422 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 MED7O43513 233 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 STRNO43815 780 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 STAU1O95793 577 aaKnown RBP10.32□□□□□ -0.76
RTF1-206ENST00000560447 GAS8O95995 478 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 KRT14P02533 472 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 MCF2P10911 925 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 RARGP13631 454 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 ITIH2P19823 946 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 MMP8P22894 467 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 RRM1P23921 792 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 POLR2BP30876 1174 aaKnown RBP10.32□□□□□ -0.76
RTF1-206ENST00000560447 ATICP31939 592 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 PHKA2P46019 1235 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 MARCKSL1P49006 195 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 ZNF844Q08AG5 666 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 FSTL1Q12841 308 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 CALCOCO2Q13137 446 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 ZNF211Q13398 564 aaPredicted RBP10.32□□□□□ -0.76
RTF1-206ENST00000560447 TRPC3Q13507 836 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 PTK6Q13882 451 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 CCNG2Q16589 344 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 PTPROQ16827 1216 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 NAA35Q5VZE5 725 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 GPAT2Q6NUI2 795 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 DRICH1Q6PGQ1 229 aaPredicted RBP10.32□□□□□ -0.76
RTF1-206ENST00000560447 TMEM270Q6UE05 265 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 TRMT10CQ7L0Y3 403 aaKnown RBP10.32□□□□□ -0.76
RTF1-206ENST00000560447 DDX42Q86XP3 938 aaKnown RBP eCLIP10.32□□□□□ -0.76
RTF1-206ENST00000560447 CCDC105Q8IYK2 499 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 NIPA2Q8N8Q9 360 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 TMEM35BQ8NCS4 154 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 ZNF606Q8WXB4 792 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 ART4Q93070 314 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 PGM2Q96G03 612 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 RBM41Q96IZ5 413 aaKnown RBP10.32□□□□□ -0.76
RTF1-206ENST00000560447 ZBTB45Q96K62 511 aaPredicted RBP10.32□□□□□ -0.76
RTF1-206ENST00000560447 SPATA33Q96N06 139 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 HINFPQ9BQA5 517 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 TRIM51Q9BSJ1 452 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 TCHPQ9BT92 498 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 FRMD8P1Q9BZ68 369 aaPredicted RBP10.32□□□□□ -0.76
RTF1-206ENST00000560447 ROPN1BQ9BZX4 212 aaPredicted RBP10.32□□□□□ -0.76
RTF1-206ENST00000560447 ASB7Q9H672 318 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 VRTNQ9H8Y1 702 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 ROPN1Q9HAT0 212 aaPredicted RBP10.32□□□□□ -0.76
RTF1-206ENST00000560447 GRHL1Q9NZI5 618 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 GGA2Q9UJY4 613 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 STRIP2Q9ULQ0 834 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 NR2E1Q9Y466 385 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 NUB1Q9Y5A7 615 aa10.32□□□□□ -0.76
RTF1-206ENST00000560447 ARIH2O95376 493 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 GH1P01241 217 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 EDN1P05305 212 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 PAEPP09466 180 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 TMEM191BP0C7N4 346 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 RARAP10276 462 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 TXNP10599 105 aaKnown RBP10.31□□□□□ -0.76
RTF1-206ENST00000560447 GCLCP48506 637 aaPredicted RBP10.31□□□□□ -0.76
RTF1-206ENST00000560447 PMS2P54278 862 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 WNT7BP56706 349 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 GNGT1P63211 74 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 CDC42EP1Q00587 391 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 ADCY2Q08462 1091 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 BYSLQ13895 437 aaKnown RBP10.31□□□□□ -0.76
RTF1-206ENST00000560447 PIGHQ14442 188 aaPredicted RBP10.31□□□□□ -0.76
RTF1-206ENST00000560447 TRADDQ15628 312 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 LY6KQ17RY6 165 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 SGO2Q562F6 1265 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 C6orf132Q5T0Z8 1188 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 ATF7IP2Q5U623 682 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 DENND2CQ68D51 928 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 ZDHHC24Q6UX98 284 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 B4GALNT4Q76KP1 1039 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 APBB1IPQ7Z5R6 666 aaPredicted RBP10.31□□□□□ -0.76
RTF1-206ENST00000560447 RCOR2Q8IZ40 523 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 RNF149Q8NC42 400 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 OR5B17Q8NGF7 314 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 ATL2Q8NHH9 583 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 FEZF2Q8TBJ5 459 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 FNIP1Q8TF40 1166 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 UBLCP1Q8WVY7 318 aaPredicted RBP10.31□□□□□ -0.76
RTF1-206ENST00000560447 CENPTQ96BT3 561 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 OPTNQ96CV9 577 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 C18orf8Q96DM3 657 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 CYFIP2Q96F07 1278 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 LHX5Q9H2C1 402 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 DPH5Q9H2P9 285 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 CYP3A43Q9HB55 503 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 ACP6Q9NPH0 428 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 DDX56Q9NY93 547 aaKnown RBP10.31□□□□□ -0.76
RTF1-206ENST00000560447 WDR35Q9P2L0 1181 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 EFR3BQ9Y2G0 817 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 GRIN2DO15399 1336 aa10.31□□□□□ -0.76
RTF1-206ENST00000560447 MGAMO43451 1857 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 EVPLQ92817 2033 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 TMEM191CA6NGB0 347 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms