RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 SYCP2LQ5T4T6 812 aa14.11□□□□□ -0.15
TRAF3-208ENST00000560371 WDCPQ9H6R7 721 aa14.11□□□□□ -0.15
TRAF3-208ENST00000560371 H0Y626 953 aa14.11□□□□□ -0.15
TRAF3-208ENST00000560371 RPSAP08865 295 aaKnown RBP14.11□□□□□ -0.15
TRAF3-208ENST00000560371 CLMNQ96JQ2 1002 aa14.11□□□□□ -0.15
TRAF3-208ENST00000560371 TEKT2Q9UIF3 430 aa14.11□□□□□ -0.15
TRAF3-208ENST00000560371 NRXN1Q9ULB1 1477 aa14.11□□□□□ -0.15
TRAF3-208ENST00000560371 SPATC1LQ9H0A9 340 aa14.11□□□□□ -0.15
TRAF3-208ENST00000560371 UBQLN1Q9UMX0 589 aaKnown RBP14.11□□□□□ -0.15
TRAF3-208ENST00000560371 PPLO60437 1756 aa14.11□□□□□ -0.15
TRAF3-208ENST00000560371 IQGAP1P46940 1657 aa14.11□□□□□ -0.15
TRAF3-208ENST00000560371 MSH4O15457 936 aa14.11□□□□□ -0.15
TRAF3-208ENST00000560371 KPNA6O60684 536 aa14.11□□□□□ -0.15
TRAF3-208ENST00000560371 TROAPQ12815 778 aa14.11□□□□□ -0.15
TRAF3-208ENST00000560371 PTRHD1Q6GMV3 140 aaKnown RBP14.11□□□□□ -0.15
TRAF3-208ENST00000560371 SYDE1Q6ZW31 735 aaPredicted RBP14.11□□□□□ -0.15
TRAF3-208ENST00000560371 AGR3Q8TD06 166 aa14.11□□□□□ -0.15
TRAF3-208ENST00000560371 TSPAN17Q96FV3 270 aa14.11□□□□□ -0.15
TRAF3-208ENST00000560371 CEMIPQ8WUJ3 1361 aa14.11□□□□□ -0.15
TRAF3-208ENST00000560371 RSPH10B2B2RC85 870 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 THP07101 528 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 RSPH10BP0C881 870 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 RAG1P15918 1043 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 NAMPTP43490 491 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 SLC11A2P49281 568 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 SLC26A2P50443 739 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 OTUB1Q96FW1 271 aaPredicted RBP14.1□□□□□ -0.15
TRAF3-208ENST00000560371 SLC25A13Q9UJS0 675 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 TMX2Q9Y320 296 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 VTNP04004 478 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 CKMP06732 381 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 SLC2A3P11169 496 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 SPATA4Q8NEY3 305 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 KIF17Q9P2E2 1029 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.1□□□□□ -0.15
TRAF3-208ENST00000560371 SSU72P8A0A1W2PR75 194 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 OGTO15294 1046 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 KLRC1P26715 233 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 HIBCHQ6NVY1 386 aaPredicted RBP14.1□□□□□ -0.15
TRAF3-208ENST00000560371 ANKMY2Q8IV38 441 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 SENP2Q9HC62 589 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 FAF1Q9UNN5 650 aaPredicted RBP14.1□□□□□ -0.15
TRAF3-208ENST00000560371 RGS4P49798 205 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 CLCN3P51790 818 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 SMTNL2Q2TAL5 461 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 AGPAT5Q9NUQ2 364 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 PKP3Q9Y446 797 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 PRR23AA6NEV1 266 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 MAP2K2P36507 400 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 ZNF677Q86XU0 584 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 MRPS31Q92665 395 aaKnown RBP14.1□□□□□ -0.15
TRAF3-208ENST00000560371 KRT35Q92764 455 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 MTBPQ96DY7 904 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 GMCL1Q96IK5 515 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 ING2Q9H160 280 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 XPO7Q9UIA9 1087 aaKnown RBP14.1□□□□□ -0.15
TRAF3-208ENST00000560371 CCDC78A2IDD5 438 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 RFX5P48382 616 aaPredicted RBP14.1□□□□□ -0.15
TRAF3-208ENST00000560371 POLD3Q15054 466 aaPredicted RBP14.1□□□□□ -0.15
TRAF3-208ENST00000560371 MAP1SQ66K74 1059 aaPredicted RBP14.1□□□□□ -0.15
TRAF3-208ENST00000560371 TXNRD3Q86VQ6 643 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 ARHGEF38Q9NXL2 777 aa14.1□□□□□ -0.15
TRAF3-208ENST00000560371 MANSC4A6NHS7 340 aaPredicted RBP14.09□□□□□ -0.15
TRAF3-208ENST00000560371 MTSS1O43312 755 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 ATP5HO75947 161 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 URODP06132 367 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 PYGBP11216 843 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 USP49Q70CQ1 688 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 RUBCNLQ9H714 662 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 BEND6Q5SZJ8 279 aaPredicted RBP14.09□□□□□ -0.15
TRAF3-208ENST00000560371 CNPY4Q8N129 248 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 RSAD1Q9HA92 442 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 GPD1P21695 349 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 SRPK1Q96SB4 655 aaKnown RBP14.09□□□□□ -0.15
TRAF3-208ENST00000560371 NEUROG2Q9H2A3 272 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 ACTR5Q9H9F9 607 aaPredicted RBP14.09□□□□□ -0.15
TRAF3-208ENST00000560371 TTLL13PA6NNM8 815 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 AP1G2O75843 785 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 SLC9A1P19634 815 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 ANTXR2P58335 489 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 WDR48Q8TAF3 677 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 UCMAQ8WVF2 138 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 DDIT4Q9NX09 232 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 ZFP69BQ9UJL9 534 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 SYCE1LA8MT33 242 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 H3BRB1 525 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 P4HA2O15460 535 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 ATP6V0D2Q8N8Y2 350 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 TUT1Q9H6E5 874 aaKnown RBP14.09□□□□□ -0.15
TRAF3-208ENST00000560371 ZC3H7BQ9UGR2 993 aaKnown RBP14.09□□□□□ -0.15
TRAF3-208ENST00000560371 ATP11BQ9Y2G3 1177 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 TGFB3P10600 412 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 EPHB2P29323 1055 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 BYSLQ13895 437 aaKnown RBP14.09□□□□□ -0.15
TRAF3-208ENST00000560371 SHCBP1Q8NEM2 672 aa14.09□□□□□ -0.15
TRAF3-208ENST00000560371 TGS1Q96RS0 853 aaKnown RBP14.09□□□□□ -0.15
TRAF3-208ENST00000560371 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.08□□□□□ -0.15
TRAF3-208ENST00000560371 ZNF177Q13360 481 aaPredicted RBP14.08□□□□□ -0.15
TRAF3-208ENST00000560371 GSPT2Q8IYD1 628 aaKnown RBP14.08□□□□□ -0.15
TRAF3-208ENST00000560371 SAMD3Q8N6K7 520 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms