RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 CCDC185Q8N715 623 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 GPR101Q96P66 508 aaPredicted RBP14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 MNTQ99583 582 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 THUMPD3Q9BV44 507 aaKnown RBP14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 MAGI1Q96QZ7 1491 aaPredicted RBP14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 FTLP02792 175 aaPredicted RBP14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 SOX11P35716 441 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 RPS8P62241 208 aaKnown RBP14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 CHRNB3Q05901 458 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 RBBP4Q09028 425 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 AP3B2Q13367 1082 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 FAM160B2Q86V87 743 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 NLRP10Q86W26 655 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 RDM1Q8NG50 284 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 SGSM3Q96HU1 749 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 SIK2Q9H0K1 926 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 NPATQ14207 1427 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 A0A0B4J269 797 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 DYNC1LI2O43237 492 aaPredicted RBP14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 FCGR1AP12314 374 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 SULT1E1P49888 294 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 POU4F1Q01851 419 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 TUBB3Q13509 450 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 ARHGEF26Q96DR7 871 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 VWA5AO00534 786 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 CHP2O43745 196 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 EXTL3O43909 919 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 ZNF23P17027 643 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 MAPK1P28482 360 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 AGBL2Q5U5Z8 902 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 CDK20Q8IZL9 346 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 CYP2D7A0A087X1C5 515 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 B2RBV5 119 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 PGM3O95394 542 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 ERFP50548 548 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 FUT11Q495W5 492 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 UNC13DQ70J99 1090 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 LRRC71Q8N4P6 559 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 SH3GLB2Q9NR46 395 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 GGT7Q9UJ14 662 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 COQ6Q9Y2Z9 468 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 LCP1P13796 627 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 SPRP35270 261 aaPredicted RBP14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 GRIK1P39086 918 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 PTPN21Q16825 1174 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 ZNF284Q2VY69 593 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 SYCP2LQ5T4T6 812 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 MZT2BQ6NZ67 158 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 JADE3Q92613 823 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 COPRSQ9NQ92 184 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 LSM7Q9UK45 103 aaKnown RBP14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 H3BMM5 538 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 SPAG6O75602 509 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 APRTP07741 180 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 TRAP1Q12931 704 aaKnown RBP14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 VPS33AQ96AX1 596 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 PCMTD2Q9NV79 361 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 MYO3BQ8WXR4 1341 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 FBLN1P23142 703 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 RXRGP48443 463 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 PPIDQ08752 370 aaKnown RBP14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 ORC2Q13416 577 aaPredicted RBP14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 MAGED4Q96JG8 741 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 CATSPER2Q96P56 530 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 SLC52A2Q9HAB3 445 aa14.44□□□□□ -0.1
CSPG4P12-202ENST00000559989 CD109Q6YHK3 1445 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 RALGDSQ12967 914 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 SMAD1Q15797 465 aaKnown RBP14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 GPR162Q16538 588 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 FAR2Q96K12 515 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 ATP1A1P05023 1023 aaKnown RBP14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 CLTBP09497 229 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 NUDT2P50583 147 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 KIAA0825Q8IV33 1275 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 XXYLT1Q8NBI6 393 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 SERPINB12Q96P63 405 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 STN1Q9H668 368 aaKnown RBP14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 GRID1Q9ULK0 1009 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 A0A0D9SFI3 127 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 PNMA6FA0A0J9YX94 578 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 DGKIO75912 1065 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 CNPP09543 421 aaKnown RBP14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 MMGT1Q8N4V1 131 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 C6orf62Q9GZU0 229 aaPredicted RBP14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 MUC3BQ9H195 1237 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 CAPN10Q9HC96 672 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 LGALS16A8MUM7 142 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 CROCCP3Q8IVE0 287 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 IP6K1Q92551 441 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 MRPL4Q9BYD3 311 aaKnown RBP14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 KANSL2Q9H9L4 492 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 ENOPH1Q9UHY7 261 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 VPS9D1Q9Y2B5 631 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 MYL12AP19105 171 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 AP3M2P53677 418 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 PTH1RQ03431 593 aa14.43□□□□□ -0.1
CSPG4P12-202ENST00000559989 ZNF211Q13398 564 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms