RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 FAM213AQ9BRX8 229 aa22.13■■□□□ 1.13
CHRNA3-207ENST00000559941 TRIM9Q9C026 710 aa22.13■■□□□ 1.13
CHRNA3-207ENST00000559941 ARHGEF3Q9NR81 526 aa22.13■■□□□ 1.13
CHRNA3-207ENST00000559941 YIPF1Q9Y548 306 aa22.13■■□□□ 1.13
CHRNA3-207ENST00000559941 STK25O00506 426 aa22.12■■□□□ 1.13
CHRNA3-207ENST00000559941 PRPF6O94906 941 aaKnown RBP22.12■■□□□ 1.13
CHRNA3-207ENST00000559941 AMPD3Q01432 767 aa22.12■■□□□ 1.13
CHRNA3-207ENST00000559941 CYP4A22Q5TCH4 519 aa22.12■■□□□ 1.13
CHRNA3-207ENST00000559941 ATL3Q6DD88 541 aa22.12■■□□□ 1.13
CHRNA3-207ENST00000559941 PDZD4Q76G19 769 aaPredicted RBP22.12■■□□□ 1.13
CHRNA3-207ENST00000559941 HS6ST3Q8IZP7 471 aa22.12■■□□□ 1.13
CHRNA3-207ENST00000559941 IQUBQ8NA54 791 aa22.12■■□□□ 1.13
CHRNA3-207ENST00000559941 KCNG4Q8TDN1 519 aa22.12■■□□□ 1.13
CHRNA3-207ENST00000559941 DHX58Q96C10 678 aa22.12■■□□□ 1.13
CHRNA3-207ENST00000559941 SAAL1Q96ER3 474 aa22.12■■□□□ 1.13
CHRNA3-207ENST00000559941 PGLYRP2Q96PD5 576 aa22.12■■□□□ 1.13
CHRNA3-207ENST00000559941 CRISPLD1Q9H336 500 aa22.12■■□□□ 1.13
CHRNA3-207ENST00000559941 TBC1D17Q9HA65 648 aa22.12■■□□□ 1.13
CHRNA3-207ENST00000559941 FAM86C1Q9NVL1 165 aa22.12■■□□□ 1.13
CHRNA3-207ENST00000559941 DSEQ9UL01 958 aa22.12■■□□□ 1.13
CHRNA3-207ENST00000559941 ECI2O75521 394 aa22.11■■□□□ 1.13
CHRNA3-207ENST00000559941 CCR2P41597 374 aa22.11■■□□□ 1.13
CHRNA3-207ENST00000559941 EPHA5P54756 1037 aa22.11■■□□□ 1.13
CHRNA3-207ENST00000559941 WNT7BP56706 349 aa22.11■■□□□ 1.13
CHRNA3-207ENST00000559941 DUSP4Q13115 394 aa22.11■■□□□ 1.13
CHRNA3-207ENST00000559941 FOXD4L6Q3SYB3 417 aaPredicted RBP22.11■■□□□ 1.13
CHRNA3-207ENST00000559941 CENPPQ6IPU0 288 aa22.11■■□□□ 1.13
CHRNA3-207ENST00000559941 ARMCX5Q6P1M9 558 aa22.11■■□□□ 1.13
CHRNA3-207ENST00000559941 CNNM4Q6P4Q7 775 aa22.11■■□□□ 1.13
CHRNA3-207ENST00000559941 FOXD4L3Q6VB84 417 aaPredicted RBP22.11■■□□□ 1.13
CHRNA3-207ENST00000559941 CCDC105Q8IYK2 499 aa22.11■■□□□ 1.13
CHRNA3-207ENST00000559941 LEMD2Q8NC56 503 aa22.11■■□□□ 1.13
CHRNA3-207ENST00000559941 BORCS6Q96GS4 357 aa22.11■■□□□ 1.13
CHRNA3-207ENST00000559941 KXD1Q9BQD3 176 aa22.11■■□□□ 1.13
CHRNA3-207ENST00000559941 CBWD1Q9BRT8 395 aa22.11■■□□□ 1.13
CHRNA3-207ENST00000559941 MIA3Q5JRA6 1907 aa22.1■■□□□ 1.13
CHRNA3-207ENST00000559941 MTMR11A4FU01 709 aa22.1■■□□□ 1.13
CHRNA3-207ENST00000559941 CYB561D2O14569 222 aa22.1■■□□□ 1.13
CHRNA3-207ENST00000559941 EXTL3O43909 919 aa22.1■■□□□ 1.13
CHRNA3-207ENST00000559941 RFX1P22670 979 aa22.1■■□□□ 1.13
CHRNA3-207ENST00000559941 PLD1Q13393 1074 aa22.1■■□□□ 1.13
CHRNA3-207ENST00000559941 STXBP4Q6ZWJ1 553 aa22.1■■□□□ 1.13
CHRNA3-207ENST00000559941 TMEM209Q96SK2 561 aa22.1■■□□□ 1.13
CHRNA3-207ENST00000559941 ASAH2Q9NR71 780 aa22.1■■□□□ 1.13
CHRNA3-207ENST00000559941 RBAKQ9NYW8 714 aaPredicted RBP22.1■■□□□ 1.13
CHRNA3-207ENST00000559941 GOLGA8IPA6NC78 632 aa22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 GOLGA8JA6NMD2 632 aa22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 NRG2O14511 850 aaPredicted RBP22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 MOSPD3O75425 235 aa22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 EPHB3P54753 998 aa22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 STARD6P59095 220 aa22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 SV2CQ496J9 727 aa22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 TANGO2Q6ICL3 276 aa22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 METTL23Q86XA0 190 aa22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 DTWD2Q8NBA8 298 aa22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 ATAD1Q8NBU5 361 aa22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 GLIS3Q8NEA6 775 aa22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 OR10T2Q8NGX3 314 aa22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 CACTINQ8WUQ7 758 aaKnown RBP22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 HPS3Q969F9 1004 aa22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 ELSPBP1Q96BH3 223 aa22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 SHDQ96IW2 340 aa22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 C7orf25Q9BPX7 421 aa22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 PYM1Q9BRP8 204 aaKnown RBP22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 LRRC3Q9BY71 257 aa22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 PLA2G2FQ9BZM2 168 aa22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 DNAJC25Q9H1X3 360 aa22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 PCIF1Q9H4Z3 704 aa22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 MAGEF1Q9HAY2 307 aa22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 HSFX1Q9UBD0 423 aa22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 PCDHA7Q9UN72 937 aa22.09■■□□□ 1.13
CHRNA3-207ENST00000559941 KPNA7A9QM74 516 aa22.08■■□□□ 1.13
CHRNA3-207ENST00000559941 KIAA0391O15091 583 aaKnown RBP22.08■■□□□ 1.13
CHRNA3-207ENST00000559941 POLR2DO15514 142 aaKnown RBP22.08■■□□□ 1.13
CHRNA3-207ENST00000559941 MYL4P12829 197 aa22.08■■□□□ 1.13
CHRNA3-207ENST00000559941 PNPLA4P41247 253 aa22.08■■□□□ 1.13
CHRNA3-207ENST00000559941 ALDH1A3P47895 512 aa22.08■■□□□ 1.13
CHRNA3-207ENST00000559941 ASIC1P78348 528 aa22.08■■□□□ 1.13
CHRNA3-207ENST00000559941 TFAMQ00059 246 aaKnown RBP22.08■■□□□ 1.13
CHRNA3-207ENST00000559941 PFKPQ01813 784 aa22.08■■□□□ 1.13
CHRNA3-207ENST00000559941 PKP1Q13835 747 aa22.08■■□□□ 1.13
CHRNA3-207ENST00000559941 THEM5Q8N1Q8 247 aa22.08■■□□□ 1.13
CHRNA3-207ENST00000559941 GPD1LQ8N335 351 aa22.08■■□□□ 1.13
CHRNA3-207ENST00000559941 C1orf127Q8N9H9 656 aa22.08■■□□□ 1.13
CHRNA3-207ENST00000559941 SPRYD3Q8NCJ5 442 aa22.08■■□□□ 1.13
CHRNA3-207ENST00000559941 ZNF560Q96MR9 790 aa22.08■■□□□ 1.13
CHRNA3-207ENST00000559941 ZCWPW1Q9H0M4 648 aa22.08■■□□□ 1.13
CHRNA3-207ENST00000559941 CFAP45Q9UL16 551 aa22.08■■□□□ 1.13
CHRNA3-207ENST00000559941 SLC27A5Q9Y2P5 690 aa22.08■■□□□ 1.13
CHRNA3-207ENST00000559941 GTF3C3Q9Y5Q9 886 aa22.08■■□□□ 1.13
CHRNA3-207ENST00000559941 EIF3DO15371 548 aaKnown RBP eCLIP22.07■■□□□ 1.12
CHRNA3-207ENST00000559941 FCARP24071 287 aa22.07■■□□□ 1.12
CHRNA3-207ENST00000559941 ME1P48163 572 aa22.07■■□□□ 1.12
CHRNA3-207ENST00000559941 PRKCQQ04759 706 aa22.07■■□□□ 1.12
CHRNA3-207ENST00000559941 SNW1Q13573 536 aaKnown RBP22.07■■□□□ 1.12
CHRNA3-207ENST00000559941 MLF2Q15773 248 aaPredicted RBP22.07■■□□□ 1.12
CHRNA3-207ENST00000559941 SLC44A4Q53GD3 710 aa22.07■■□□□ 1.12
CHRNA3-207ENST00000559941 FAM78AQ5JUQ0 283 aa22.07■■□□□ 1.12
CHRNA3-207ENST00000559941 RESP18Q5W5W9 173 aa22.07■■□□□ 1.12
CHRNA3-207ENST00000559941 WSCD1Q658N2 575 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms