RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 LTBP2Q14767 1821 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 TET1Q8NFU7 2136 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 ANK1P16157 1881 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 A0A0B4J269 797 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 GOLGA6L19H0YKK7 550 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 PDXKO00764 312 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 TLR3O15455 904 aaKnown RBP5.67□□□□□ -1.5
SPG11-220ENST00000559933 ASAP2O43150 1006 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 TEX33O43247 280 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 EXOC3O60645 756 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 LRRN2O75325 713 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 RPS6KA5O75582 802 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 CLTBP09497 229 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 ACRP10323 421 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 SELPP16109 830 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 SFPQP23246 707 aaKnown RBP eCLIP5.67□□□□□ -1.5
SPG11-220ENST00000559933 EIF4BP23588 611 aaKnown RBP5.67□□□□□ -1.5
SPG11-220ENST00000559933 AKAP5P24588 427 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 MTIF2P46199 727 aaKnown RBP5.67□□□□□ -1.5
SPG11-220ENST00000559933 EFNA5P52803 228 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 FANCCQ00597 558 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 LRRC63Q05C16 580 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 MCL1Q07820 350 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 GOLGA8FQ08AF8 430 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 GOLGA8DPQ0D2H9 430 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 PAK2Q13177 524 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 ALCAMQ13740 583 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 NOLC1Q14978 699 aaKnown RBP eCLIP5.67□□□□□ -1.5
SPG11-220ENST00000559933 FAM187BQ17R55 369 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 CCDC40Q4G0X9 1142 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 TCP11X2Q5H9J9 407 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 FAM26DQ5JW98 314 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 MIIPQ5JXC2 388 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 GLRA4Q5JXX5 417 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 C1orf220Q5T0J3 134 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 TTC39BQ5VTQ0 682 aaPredicted RBP5.67□□□□□ -1.5
SPG11-220ENST00000559933 MPZL3Q6UWV2 235 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 TSHZ1Q6ZSZ6 1077 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 STXBP4Q6ZWJ1 553 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 HS2ST1Q7LGA3 356 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 ANKRD33Q7Z3H0 272 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 SRGAP1Q7Z6B7 1085 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 NECAB2Q7Z6G3 386 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 RSPH3Q86UC2 560 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 ETFBKMTQ8IXQ9 262 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 FAM186BQ8IYM0 893 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 RNF169Q8NCN4 708 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 TTC9Q92623 222 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 CCDC127Q96BQ5 260 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 LPIN3Q9BQK8 851 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 TCHPQ9BT92 498 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 NFKBIZQ9BYH8 718 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 SAP130Q9H0E3 1048 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 VPS16Q9H269 839 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 TMEM206Q9H813 350 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 PDE11AQ9HCR9 933 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 PTPRHQ9HD43 1115 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 TMEM39AQ9NV64 488 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 DMAC2Q9NW81 257 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 SNTG2Q9NY99 539 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 IFNKQ9P0W0 207 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 STIM2Q9P246 746 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 CACNG4Q9UBN1 327 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 TBX21Q9UL17 535 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 ZMYND8Q9ULU4 1186 aaPredicted RBP5.67□□□□□ -1.5
SPG11-220ENST00000559933 PADI3Q9ULW8 664 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 EXOC7Q9UPT5 735 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 TNFSF13BQ9Y275 285 aa5.67□□□□□ -1.5
SPG11-220ENST00000559933 RALGAPA2Q2PPJ7 1873 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 LRRIQ3A6PVS8 624 aaPredicted RBP5.66□□□□□ -1.5
SPG11-220ENST00000559933 SMTNL1A8MU46 457 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 DCDC2CA8MYV0 355 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 H0YCG3 227 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 PES1O00541 588 aaKnown RBP5.66□□□□□ -1.5
SPG11-220ENST00000559933 N4BP3O15049 544 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 CETN3O15182 167 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 SLC16A3O15427 465 aaKnown RBP5.66□□□□□ -1.5
SPG11-220ENST00000559933 CLDN3O15551 220 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 MMP20O60882 483 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 TOM1L1O75674 476 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 KIF20AO95235 890 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 ADCY5O95622 1261 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 NFICP08651 508 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 STAG3L1P0CL83 205 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 DLATP10515 647 aaKnown RBP5.66□□□□□ -1.5
SPG11-220ENST00000559933 EPB41P11171 864 aaKnown RBP5.66□□□□□ -1.5
SPG11-220ENST00000559933 CSF2RAP15509 400 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 ATF7P17544 494 aaPredicted RBP5.66□□□□□ -1.5
SPG11-220ENST00000559933 GCLMP48507 274 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 GATMP50440 423 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 COPB1P53618 953 aaKnown RBP5.66□□□□□ -1.5
SPG11-220ENST00000559933 EPHB4P54760 987 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 FKBP3Q00688 224 aaKnown RBP5.66□□□□□ -1.5
SPG11-220ENST00000559933 POU5F1BQ06416 359 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 CYP24A1Q07973 514 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 PPP3CAQ08209 521 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 RBL2Q08999 1139 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 ENOX2Q16206 610 aaKnown RBP5.66□□□□□ -1.5
SPG11-220ENST00000559933 SNRNP35Q16560 246 aaKnown RBP5.66□□□□□ -1.5
SPG11-220ENST00000559933 EDRF1Q3B7T1 1238 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms