RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 NCKAP1LP55160 1127 aa9.96□□□□□ -0.82
HDDC3-204ENST00000559834 SPAG1Q07617 926 aa9.96□□□□□ -0.82
HDDC3-204ENST00000559834 ARHGAP15Q53QZ3 475 aa9.96□□□□□ -0.82
HDDC3-204ENST00000559834 DGKKQ5KSL6 1271 aa9.96□□□□□ -0.82
HDDC3-204ENST00000559834 LAIR1Q6GTX8 287 aa9.96□□□□□ -0.82
HDDC3-204ENST00000559834 CENPPQ6IPU0 288 aa9.96□□□□□ -0.82
HDDC3-204ENST00000559834 DNAJB7Q7Z6W7 309 aaPredicted RBP9.96□□□□□ -0.82
HDDC3-204ENST00000559834 RALGPS2Q86X27 583 aaPredicted RBP9.96□□□□□ -0.82
HDDC3-204ENST00000559834 ARID3BQ8IVW6 561 aaPredicted RBP9.96□□□□□ -0.82
HDDC3-204ENST00000559834 MYCT1Q8N699 235 aa9.96□□□□□ -0.82
HDDC3-204ENST00000559834 SHKBP1Q8TBC3 707 aa9.96□□□□□ -0.82
HDDC3-204ENST00000559834 FAM212AQ96EL1 285 aa9.96□□□□□ -0.82
HDDC3-204ENST00000559834 CALML4Q96GE6 196 aa9.96□□□□□ -0.82
HDDC3-204ENST00000559834 AK8Q96MA6 479 aa9.96□□□□□ -0.82
HDDC3-204ENST00000559834 PNMA5Q96PV4 448 aa9.96□□□□□ -0.82
HDDC3-204ENST00000559834 RTKNQ9BST9 563 aa9.96□□□□□ -0.82
HDDC3-204ENST00000559834 TBX20Q9UMR3 447 aa9.96□□□□□ -0.82
HDDC3-204ENST00000559834 SLC27A5Q9Y2P5 690 aa9.96□□□□□ -0.82
HDDC3-204ENST00000559834 GPR179Q6PRD1 2367 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 H3BQV1 296 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 NRG2O14511 850 aaPredicted RBP9.95□□□□□ -0.82
HDDC3-204ENST00000559834 HNRNPDLO14979 420 aaKnown RBP9.95□□□□□ -0.82
HDDC3-204ENST00000559834 FOXD2O60548 495 aaPredicted RBP9.95□□□□□ -0.82
HDDC3-204ENST00000559834 LRP3O75074 770 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 FAM13AO94988 1023 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 CENPBP07199 599 aaPredicted RBP9.95□□□□□ -0.82
HDDC3-204ENST00000559834 ADRB2P07550 413 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 RETP07949 1114 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 OR4Q2P0C623 313 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 ODC1P11926 461 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 TDGF1P13385 188 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 UBA7P41226 1012 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 TNFSF9P41273 254 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 LILRA4P59901 499 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 FCHO2Q0JRZ9 810 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 SMARCB1Q12824 385 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 SIM2Q14190 667 aaPredicted RBP9.95□□□□□ -0.82
HDDC3-204ENST00000559834 VEPH1Q14D04 833 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 PTPAQ15257 358 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 TAF12Q16514 161 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 ARHGAP29Q52LW3 1261 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 ARSHQ5FYA8 562 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 SPATA1Q5VX52 437 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 SLFN12LQ6IEE8 588 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 PRR23BQ6ZRT6 265 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 METTL23Q86XA0 190 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 THEM5Q8N1Q8 247 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 SYNPOQ8N3V7 929 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 ATAD1Q8NBU5 361 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 PSMG2Q969U7 264 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 SENP8Q96LD8 212 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 LRRC3Q9BY71 257 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 DNAJC25Q9H1X3 360 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 ATXN3LQ9H3M9 355 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 THG1LQ9NWX6 298 aaKnown RBP9.95□□□□□ -0.82
HDDC3-204ENST00000559834 OBP2AQ9NY56 170 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 ZMYM5Q9UJ78 669 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 DSEQ9UL01 958 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 CITO14578 2027 aa9.95□□□□□ -0.82
HDDC3-204ENST00000559834 A0A0B4J269 797 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 NPHP3-ACAD11A0A0J9YXS1 232 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 MYBPHLA2RUH7 354 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 MTMR11A4FU01 709 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 K7ENM7 598 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 ARNTLO00327 626 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 TRAK2O60296 914 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 PIGRP01833 764 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 KRT18P05783 430 aaKnown RBP9.94□□□□□ -0.82
HDDC3-204ENST00000559834 TGM1P22735 817 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 WEE1P30291 646 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 PLCB2Q00722 1185 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 SATB1Q01826 763 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 CACNB1Q02641 598 aaPredicted RBP9.94□□□□□ -0.82
HDDC3-204ENST00000559834 SPEM2Q0P670 501 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 ENOX2Q16206 610 aaKnown RBP9.94□□□□□ -0.82
HDDC3-204ENST00000559834 TMEM119Q4V9L6 283 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 GPR158Q5T848 1215 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 GAREM2Q75VX8 874 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 LONP2Q86WA8 852 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 GPBP1Q86WP2 473 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 TMC8Q8IU68 726 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 C2orf15Q8WU43 125 aaKnown RBP9.94□□□□□ -0.82
HDDC3-204ENST00000559834 GCNAQ96QF7 691 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 MSTO1Q9BUK6 570 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 HAPLN2Q9GZV7 340 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 ZHX3Q9H4I2 956 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 ASB7Q9H672 318 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 TASP1Q9H6P5 420 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 PARVGQ9HBI0 331 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 CPSF3Q9UKF6 684 aaKnown RBP9.94□□□□□ -0.82
HDDC3-204ENST00000559834 DERAQ9Y315 318 aa9.94□□□□□ -0.82
HDDC3-204ENST00000559834 COL4A3Q01955 1670 aa9.93□□□□□ -0.82
HDDC3-204ENST00000559834 SLC38A8A6NNN8 435 aa9.93□□□□□ -0.82
HDDC3-204ENST00000559834 SPECC1L-ADORA2AF8WAN1 911 aa9.93□□□□□ -0.82
HDDC3-204ENST00000559834 PIRO00625 290 aa9.93□□□□□ -0.82
HDDC3-204ENST00000559834 TBCAO75347 108 aaKnown RBP9.93□□□□□ -0.82
HDDC3-204ENST00000559834 PAPSS2O95340 614 aaPredicted RBP9.93□□□□□ -0.82
HDDC3-204ENST00000559834 VNN2O95498 520 aa9.93□□□□□ -0.82
HDDC3-204ENST00000559834 BMP15O95972 392 aa9.93□□□□□ -0.82
HDDC3-204ENST00000559834 CYP11A1P05108 521 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms