RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 PDZD4Q76G19 769 aaPredicted RBP20.4■□□□□ 0.86
CDC42BPB-206ENST00000559790 SFR1Q86XK3 245 aa20.4■□□□□ 0.86
CDC42BPB-206ENST00000559790 EFCAB13Q8IY85 973 aa20.4■□□□□ 0.86
CDC42BPB-206ENST00000559790 SUMF1Q8NBK3 374 aa20.4■□□□□ 0.86
CDC42BPB-206ENST00000559790 ZSWIM2Q8NEG5 633 aa20.4■□□□□ 0.86
CDC42BPB-206ENST00000559790 NELL1Q92832 810 aa20.4■□□□□ 0.86
CDC42BPB-206ENST00000559790 DNASE1L2Q92874 299 aa20.4■□□□□ 0.86
CDC42BPB-206ENST00000559790 DNAJC19Q96DA6 116 aa20.4■□□□□ 0.86
CDC42BPB-206ENST00000559790 MSTO1Q9BUK6 570 aa20.4■□□□□ 0.86
CDC42BPB-206ENST00000559790 FGFBP2Q9BYJ0 223 aa20.4■□□□□ 0.86
CDC42BPB-206ENST00000559790 RPF1Q9H9Y2 349 aaKnown RBP20.4■□□□□ 0.86
CDC42BPB-206ENST00000559790 TRPV4Q9HBA0 871 aa20.4■□□□□ 0.86
CDC42BPB-206ENST00000559790 MAFFQ9ULX9 164 aa20.4■□□□□ 0.86
CDC42BPB-206ENST00000559790 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.4■□□□□ 0.86
CDC42BPB-206ENST00000559790 RALGAPA1Q6GYQ0 2036 aa20.39■□□□□ 0.86
CDC42BPB-206ENST00000559790 SOAT2O75908 522 aa20.39■□□□□ 0.85
CDC42BPB-206ENST00000559790 VIPR2P41587 438 aa20.39■□□□□ 0.85
CDC42BPB-206ENST00000559790 MATR3P43243 847 aaKnown RBP eCLIP20.39■□□□□ 0.85
CDC42BPB-206ENST00000559790 ACOT2P49753 483 aa20.39■□□□□ 0.85
CDC42BPB-206ENST00000559790 GPR17Q13304 367 aa20.39■□□□□ 0.85
CDC42BPB-206ENST00000559790 TEAD2Q15562 447 aa20.39■□□□□ 0.85
CDC42BPB-206ENST00000559790 CENPPQ6IPU0 288 aa20.39■□□□□ 0.85
CDC42BPB-206ENST00000559790 GAREM2Q75VX8 874 aa20.39■□□□□ 0.85
CDC42BPB-206ENST00000559790 SENP8Q96LD8 212 aa20.39■□□□□ 0.85
CDC42BPB-206ENST00000559790 MYMKA6NI61 221 aa20.38■□□□□ 0.85
CDC42BPB-206ENST00000559790 FAM170BA6NMN3 283 aa20.38■□□□□ 0.85
CDC42BPB-206ENST00000559790 CYP11A1P05108 521 aa20.38■□□□□ 0.85
CDC42BPB-206ENST00000559790 MYL4P12829 197 aa20.38■□□□□ 0.85
CDC42BPB-206ENST00000559790 TDGF1P13385 188 aa20.38■□□□□ 0.85
CDC42BPB-206ENST00000559790 SCP2P22307 547 aa20.38■□□□□ 0.85
CDC42BPB-206ENST00000559790 MARCKSP29966 332 aaPredicted RBP20.38■□□□□ 0.85
CDC42BPB-206ENST00000559790 CASP5P51878 434 aa20.38■□□□□ 0.85
CDC42BPB-206ENST00000559790 DUSP4Q13115 394 aa20.38■□□□□ 0.85
CDC42BPB-206ENST00000559790 KYAT1Q16773 422 aa20.38■□□□□ 0.85
CDC42BPB-206ENST00000559790 OVOS1Q6IE37 1185 aa20.38■□□□□ 0.85
CDC42BPB-206ENST00000559790 ATAD1Q8NBU5 361 aa20.38■□□□□ 0.85
CDC42BPB-206ENST00000559790 SMARCD2Q92925 531 aa20.38■□□□□ 0.85
CDC42BPB-206ENST00000559790 BORCS6Q96GS4 357 aa20.38■□□□□ 0.85
CDC42BPB-206ENST00000559790 FAM84AQ96KN4 292 aa20.38■□□□□ 0.85
CDC42BPB-206ENST00000559790 CLIC6Q96NY7 704 aa20.38■□□□□ 0.85
CDC42BPB-206ENST00000559790 LRRC3BQ96PB8 259 aa20.38■□□□□ 0.85
CDC42BPB-206ENST00000559790 TSPAN18Q96SJ8 248 aa20.38■□□□□ 0.85
CDC42BPB-206ENST00000559790 PRMT8Q9NR22 394 aaPredicted RBP20.38■□□□□ 0.85
CDC42BPB-206ENST00000559790 VPS37CA5D8V6 355 aaPredicted RBP20.37■□□□□ 0.85
CDC42BPB-206ENST00000559790 OR6C75A6NL08 312 aa20.37■□□□□ 0.85
CDC42BPB-206ENST00000559790 ZNF197O14709 1029 aa20.37■□□□□ 0.85
CDC42BPB-206ENST00000559790 TBCAO75347 108 aaKnown RBP20.37■□□□□ 0.85
CDC42BPB-206ENST00000559790 LMNAP02545 664 aaKnown RBP20.37■□□□□ 0.85
CDC42BPB-206ENST00000559790 ATF6P18850 670 aa20.37■□□□□ 0.85
CDC42BPB-206ENST00000559790 MYBPC2Q14324 1141 aa20.37■□□□□ 0.85
CDC42BPB-206ENST00000559790 CXorf38Q8TB03 319 aa20.37■□□□□ 0.85
CDC42BPB-206ENST00000559790 ZSCAN18Q8TBC5 510 aaPredicted RBP20.37■□□□□ 0.85
CDC42BPB-206ENST00000559790 ZFP14Q9HCL3 533 aa20.37■□□□□ 0.85
CDC42BPB-206ENST00000559790 ASAH2Q9NR71 780 aa20.37■□□□□ 0.85
CDC42BPB-206ENST00000559790 DERAQ9Y315 318 aa20.37■□□□□ 0.85
CDC42BPB-206ENST00000559790 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.37■□□□□ 0.85
CDC42BPB-206ENST00000559790 DDIT3P35638 169 aa20.36■□□□□ 0.85
CDC42BPB-206ENST00000559790 RPS9P46781 194 aaKnown RBP20.36■□□□□ 0.85
CDC42BPB-206ENST00000559790 CDR1P51861 262 aa20.36■□□□□ 0.85
CDC42BPB-206ENST00000559790 TMEM132DQ14C87 1099 aa20.36■□□□□ 0.85
CDC42BPB-206ENST00000559790 ZNF528Q3MIS6 628 aa20.36■□□□□ 0.85
CDC42BPB-206ENST00000559790 ZNF720Q7Z2F6 126 aa20.36■□□□□ 0.85
CDC42BPB-206ENST00000559790 SEMA4AQ9H3S1 761 aa20.36■□□□□ 0.85
CDC42BPB-206ENST00000559790 ZHX3Q9H4I2 956 aa20.36■□□□□ 0.85
CDC42BPB-206ENST00000559790 IL21Q9HBE4 155 aa20.36■□□□□ 0.85
CDC42BPB-206ENST00000559790 TRPV5Q9NQA5 729 aa20.36■□□□□ 0.85
CDC42BPB-206ENST00000559790 STK17AQ9UEE5 414 aa20.36■□□□□ 0.85
CDC42BPB-206ENST00000559790 FBXO4Q9UKT5 387 aa20.36■□□□□ 0.85
CDC42BPB-206ENST00000559790 SLC27A5Q9Y2P5 690 aa20.36■□□□□ 0.85
CDC42BPB-206ENST00000559790 C2CD2Q9Y426 696 aa20.36■□□□□ 0.85
CDC42BPB-206ENST00000559790 SPTBN2O15020 2390 aa20.36■□□□□ 0.85
CDC42BPB-206ENST00000559790 NCOR2Q9Y618 2525 aa20.35■□□□□ 0.85
CDC42BPB-206ENST00000559790 A0A1W2PRU2 124 aa20.35■□□□□ 0.85
CDC42BPB-206ENST00000559790 SYT1P21579 422 aa20.35■□□□□ 0.85
CDC42BPB-206ENST00000559790 CYP4A22Q5TCH4 519 aa20.35■□□□□ 0.85
CDC42BPB-206ENST00000559790 DSTYKQ6XUX3 929 aa20.35■□□□□ 0.85
CDC42BPB-206ENST00000559790 DYMQ7RTS9 669 aa20.35■□□□□ 0.85
CDC42BPB-206ENST00000559790 CD302Q8IX05 232 aa20.35■□□□□ 0.85
CDC42BPB-206ENST00000559790 LEMD2Q8NC56 503 aa20.35■□□□□ 0.85
CDC42BPB-206ENST00000559790 ZBTB44Q8NCP5 570 aa20.35■□□□□ 0.85
CDC42BPB-206ENST00000559790 FAM212AQ96EL1 285 aa20.35■□□□□ 0.85
CDC42BPB-206ENST00000559790 ZNF512Q96ME7 567 aaPredicted RBP20.35■□□□□ 0.85
CDC42BPB-206ENST00000559790 OXCT2Q9BYC2 517 aaPredicted RBP20.35■□□□□ 0.85
CDC42BPB-206ENST00000559790 BCO2Q9BYV7 579 aa20.35■□□□□ 0.85
CDC42BPB-206ENST00000559790 ASB7Q9H672 318 aa20.35■□□□□ 0.85
CDC42BPB-206ENST00000559790 SPATA6Q9NWH7 488 aaPredicted RBP20.35■□□□□ 0.85
CDC42BPB-206ENST00000559790 SRPRBQ9Y5M8 271 aaKnown RBP20.35■□□□□ 0.85
CDC42BPB-206ENST00000559790 MORC2Q9Y6X9 1032 aaPredicted RBP20.35■□□□□ 0.85
CDC42BPB-206ENST00000559790 FRMD3A2A2Y4 597 aa20.34■□□□□ 0.85
CDC42BPB-206ENST00000559790 XPOTO43592 962 aaKnown RBP20.34■□□□□ 0.85
CDC42BPB-206ENST00000559790 LILRB5O75023 590 aa20.34■□□□□ 0.85
CDC42BPB-206ENST00000559790 PRAMEF12O95522 483 aa20.34■□□□□ 0.85
CDC42BPB-206ENST00000559790 KRT18P05783 430 aaKnown RBP20.34■□□□□ 0.85
CDC42BPB-206ENST00000559790 ODC1P11926 461 aa20.34■□□□□ 0.85
CDC42BPB-206ENST00000559790 PSMC3P17980 439 aa20.34■□□□□ 0.85
CDC42BPB-206ENST00000559790 FCHO2Q0JRZ9 810 aa20.34■□□□□ 0.85
CDC42BPB-206ENST00000559790 MTAPQ13126 283 aa20.34■□□□□ 0.85
CDC42BPB-206ENST00000559790 IQCEQ6IPM2 695 aa20.34■□□□□ 0.85
CDC42BPB-206ENST00000559790 LRRTM3Q86VH5 581 aa20.34■□□□□ 0.85
CDC42BPB-206ENST00000559790 DCLK2Q8N568 766 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms