RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 ATG13O75143 517 aa11.78□□□□□ -0.52
TRAF3-207ENST00000559734 SOAT2O75908 522 aa11.78□□□□□ -0.52
TRAF3-207ENST00000559734 AKAP3O75969 853 aa11.78□□□□□ -0.52
TRAF3-207ENST00000559734 PRAMEF12O95522 483 aa11.78□□□□□ -0.52
TRAF3-207ENST00000559734 CAVIN2O95810 425 aa11.78□□□□□ -0.52
TRAF3-207ENST00000559734 GBP1P32455 592 aa11.78□□□□□ -0.52
TRAF3-207ENST00000559734 CYP4F8P98187 520 aa11.78□□□□□ -0.52
TRAF3-207ENST00000559734 PLCB2Q00722 1185 aa11.78□□□□□ -0.52
TRAF3-207ENST00000559734 GRSF1Q12849 480 aaKnown RBP eCLIP11.78□□□□□ -0.52
TRAF3-207ENST00000559734 ITPRIPL2Q3MIP1 535 aa11.78□□□□□ -0.52
TRAF3-207ENST00000559734 FSTL4Q6MZW2 842 aa11.78□□□□□ -0.52
TRAF3-207ENST00000559734 USP37Q86T82 979 aa11.78□□□□□ -0.52
TRAF3-207ENST00000559734 TMEM130Q8N3G9 435 aa11.78□□□□□ -0.52
TRAF3-207ENST00000559734 GCNAQ96QF7 691 aa11.78□□□□□ -0.52
TRAF3-207ENST00000559734 MKNK1Q9BUB5 465 aa11.78□□□□□ -0.52
TRAF3-207ENST00000559734 LRRC3Q9BY71 257 aa11.78□□□□□ -0.52
TRAF3-207ENST00000559734 CRISPLD1Q9H336 500 aa11.78□□□□□ -0.52
TRAF3-207ENST00000559734 ORC3Q9UBD5 711 aaPredicted RBP11.78□□□□□ -0.52
TRAF3-207ENST00000559734 TUBGCP4Q9UGJ1 667 aa11.78□□□□□ -0.52
TRAF3-207ENST00000559734 MAFFQ9ULX9 164 aa11.78□□□□□ -0.52
TRAF3-207ENST00000559734 SDK1Q7Z5N4 2213 aa11.78□□□□□ -0.52
TRAF3-207ENST00000559734 CCDC163A0A0D9SF12 145 aa11.77□□□□□ -0.53
TRAF3-207ENST00000559734 TMEM8BA6NDV4 472 aa11.77□□□□□ -0.53
TRAF3-207ENST00000559734 RNF40O75150 1001 aa11.77□□□□□ -0.53
TRAF3-207ENST00000559734 RHOBTB1O94844 696 aa11.77□□□□□ -0.53
TRAF3-207ENST00000559734 VNN2O95498 520 aa11.77□□□□□ -0.53
TRAF3-207ENST00000559734 EGFP01133 1207 aa11.77□□□□□ -0.53
TRAF3-207ENST00000559734 MCM2P49736 904 aa11.77□□□□□ -0.53
TRAF3-207ENST00000559734 CDR1P51861 262 aa11.77□□□□□ -0.53
TRAF3-207ENST00000559734 RING1Q06587 406 aa11.77□□□□□ -0.53
TRAF3-207ENST00000559734 PTPAQ15257 358 aa11.77□□□□□ -0.53
TRAF3-207ENST00000559734 UAP1L1Q3KQV9 507 aa11.77□□□□□ -0.53
TRAF3-207ENST00000559734 XKR4Q5GH76 650 aa11.77□□□□□ -0.53
TRAF3-207ENST00000559734 ALKAL1Q6UXT8 129 aa11.77□□□□□ -0.53
TRAF3-207ENST00000559734 GAREM2Q75VX8 874 aa11.77□□□□□ -0.53
TRAF3-207ENST00000559734 CENPQQ7L2Z9 268 aaPredicted RBP11.77□□□□□ -0.53
TRAF3-207ENST00000559734 ERMNQ8TAM6 284 aa11.77□□□□□ -0.53
TRAF3-207ENST00000559734 ZC3H10Q96K80 434 aaKnown RBP11.77□□□□□ -0.53
TRAF3-207ENST00000559734 ACO2Q99798 780 aaKnown RBP11.77□□□□□ -0.53
TRAF3-207ENST00000559734 TARS2Q9BW92 718 aaKnown RBP11.77□□□□□ -0.53
TRAF3-207ENST00000559734 SCNM1Q9BWG6 230 aa11.77□□□□□ -0.53
TRAF3-207ENST00000559734 MRPL4Q9BYD3 311 aaKnown RBP11.77□□□□□ -0.53
TRAF3-207ENST00000559734 DUSP15Q9H1R2 295 aaPredicted RBP11.77□□□□□ -0.53
TRAF3-207ENST00000559734 TMEM60Q9H2L4 133 aa11.77□□□□□ -0.53
TRAF3-207ENST00000559734 PDRG1Q9NUG6 133 aa11.77□□□□□ -0.53
TRAF3-207ENST00000559734 THG1LQ9NWX6 298 aaKnown RBP11.77□□□□□ -0.53
TRAF3-207ENST00000559734 CNTN3Q9P232 1028 aa11.77□□□□□ -0.53
TRAF3-207ENST00000559734 INVSQ9Y283 1065 aa11.77□□□□□ -0.53
TRAF3-207ENST00000559734 PHLPP2Q6ZVD8 1323 aa11.77□□□□□ -0.53
TRAF3-207ENST00000559734 LNP1A1A4G5 178 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 REC8O95072 547 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 KCNE1P15382 129 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 U2AF2P26368 475 aaKnown RBP eCLIP11.76□□□□□ -0.53
TRAF3-207ENST00000559734 MCM7P33993 719 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 PEX3P56589 373 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 SPAG1Q07617 926 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 PSMD2Q13200 908 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 KARSQ15046 597 aaKnown RBP11.76□□□□□ -0.53
TRAF3-207ENST00000559734 SEZ6Q53EL9 994 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 TMEM196Q5HYL7 178 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 TRIM68Q6AZZ1 485 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 DSTYKQ6XUX3 929 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 DNAJB7Q7Z6W7 309 aaPredicted RBP11.76□□□□□ -0.53
TRAF3-207ENST00000559734 TTC9BQ8N6N2 239 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 ATAD1Q8NBU5 361 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 DEFB124Q8NES8 71 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 BEST2Q8NFU1 509 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 WASF1Q92558 559 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 KIFAP3Q92845 792 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 GATA6Q92908 595 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 TNFRSF25Q93038 417 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 MTMR9Q96QG7 549 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 SEPT5Q99719 369 aaPredicted RBP11.76□□□□□ -0.53
TRAF3-207ENST00000559734 TMEM121BQ9BXQ6 578 aaPredicted RBP11.76□□□□□ -0.53
TRAF3-207ENST00000559734 EBF3Q9H4W6 596 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 TMEM9BQ9NQ34 198 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 GKN1Q9NS71 199 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 OBP2AQ9NY56 170 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 ANKFY1Q9P2R3 1169 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 TPCN1Q9ULQ1 816 aa11.76□□□□□ -0.53
TRAF3-207ENST00000559734 BCLAF3A2AJT9 711 aaKnown RBP11.75□□□□□ -0.53
TRAF3-207ENST00000559734 MTMR11A4FU01 709 aa11.75□□□□□ -0.53
TRAF3-207ENST00000559734 SOBPA7XYQ1 873 aa11.75□□□□□ -0.53
TRAF3-207ENST00000559734 BTBD18B2RXH4 712 aa11.75□□□□□ -0.53
TRAF3-207ENST00000559734 KHNYNO15037 678 aaKnown RBP11.75□□□□□ -0.53
TRAF3-207ENST00000559734 APBB3O95704 486 aa11.75□□□□□ -0.53
TRAF3-207ENST00000559734 FGF19O95750 216 aa11.75□□□□□ -0.53
TRAF3-207ENST00000559734 MCF2P10911 925 aa11.75□□□□□ -0.53
TRAF3-207ENST00000559734 RUNX3Q13761 415 aa11.75□□□□□ -0.53
TRAF3-207ENST00000559734 VEPH1Q14D04 833 aa11.75□□□□□ -0.53
TRAF3-207ENST00000559734 TAF12Q16514 161 aa11.75□□□□□ -0.53
TRAF3-207ENST00000559734 LRSAM1Q6UWE0 723 aa11.75□□□□□ -0.53
TRAF3-207ENST00000559734 MPZL3Q6UWV2 235 aa11.75□□□□□ -0.53
TRAF3-207ENST00000559734 ITIH5Q86UX2 942 aa11.75□□□□□ -0.53
TRAF3-207ENST00000559734 CAMKK1Q8N5S9 505 aa11.75□□□□□ -0.53
TRAF3-207ENST00000559734 TTC16Q8NEE8 873 aa11.75□□□□□ -0.53
TRAF3-207ENST00000559734 RPLP0P6Q8NHW5 317 aa11.75□□□□□ -0.53
TRAF3-207ENST00000559734 PSMG2Q969U7 264 aa11.75□□□□□ -0.53
TRAF3-207ENST00000559734 LPIN3Q9BQK8 851 aa11.75□□□□□ -0.53
TRAF3-207ENST00000559734 POLR3CQ9BUI4 534 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms