RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 SCFD1Q8WVM8 642 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 ING5Q8WYH8 240 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 PBXIP1Q96AQ6 731 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 CCDC34Q96HJ3 373 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 CORO1BQ9BR76 489 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 OXCT2Q9BYC2 517 aaPredicted RBP8.84□□□□□ -0.99
SNX1-207ENST00000559401 MTMR12Q9C0I1 747 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 KCNK12Q9HB15 430 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 KIAA1586Q9HCI6 787 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 AGPAT3Q9NRZ7 376 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.84□□□□□ -0.99
SNX1-207ENST00000559401 FBXL21Q9UKT6 434 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 ITGA11Q9UKX5 1188 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 DSEQ9UL01 958 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 HPSEQ9Y251 543 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 MRPS23Q9Y3D9 190 aaKnown RBP8.84□□□□□ -0.99
SNX1-207ENST00000559401 INSL5Q9Y5Q6 135 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 C5orf42Q9H799 3197 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 DOCK8Q8NF50 2099 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 A0A1W2PQ27 194 aa8.83□□□□□ -1
SNX1-207ENST00000559401 A0A1W2PQ64 194 aa8.83□□□□□ -1
SNX1-207ENST00000559401 A0A1W2PQD8 194 aa8.83□□□□□ -1
SNX1-207ENST00000559401 KPNA7A9QM74 516 aa8.83□□□□□ -1
SNX1-207ENST00000559401 TGFB1I1O43294 461 aa8.83□□□□□ -1
SNX1-207ENST00000559401 KLRC4O43908 158 aa8.83□□□□□ -1
SNX1-207ENST00000559401 EXOC3O60645 756 aa8.83□□□□□ -1
SNX1-207ENST00000559401 OAZ2O95190 189 aa8.83□□□□□ -1
SNX1-207ENST00000559401 RPN1P04843 607 aaKnown RBP8.83□□□□□ -1
SNX1-207ENST00000559401 RHOP08100 348 aa8.83□□□□□ -1
SNX1-207ENST00000559401 PRR29P0C7W0 189 aa8.83□□□□□ -1
SNX1-207ENST00000559401 DLATP10515 647 aaKnown RBP8.83□□□□□ -1
SNX1-207ENST00000559401 LAMP2P13473 410 aa8.83□□□□□ -1
SNX1-207ENST00000559401 PTPN2P17706 415 aa8.83□□□□□ -1
SNX1-207ENST00000559401 TNNI1P19237 187 aa8.83□□□□□ -1
SNX1-207ENST00000559401 RFX1P22670 979 aa8.83□□□□□ -1
SNX1-207ENST00000559401 HOXD13P35453 343 aa8.83□□□□□ -1
SNX1-207ENST00000559401 CDR1P51861 262 aa8.83□□□□□ -1
SNX1-207ENST00000559401 RBP5P82980 135 aa8.83□□□□□ -1
SNX1-207ENST00000559401 EHHADHQ08426 723 aa8.83□□□□□ -1
SNX1-207ENST00000559401 TWF1Q12792 350 aa8.83□□□□□ -1
SNX1-207ENST00000559401 PSMD2Q13200 908 aa8.83□□□□□ -1
SNX1-207ENST00000559401 TDGQ13569 410 aa8.83□□□□□ -1
SNX1-207ENST00000559401 SNRNP35Q16560 246 aaKnown RBP8.83□□□□□ -1
SNX1-207ENST00000559401 SLC39A12Q504Y0 691 aa8.83□□□□□ -1
SNX1-207ENST00000559401 WSCD1Q658N2 575 aa8.83□□□□□ -1
SNX1-207ENST00000559401 IQCEQ6IPM2 695 aa8.83□□□□□ -1
SNX1-207ENST00000559401 RTL10Q7L3V2 364 aa8.83□□□□□ -1
SNX1-207ENST00000559401 C1orf127Q8N9H9 656 aa8.83□□□□□ -1
SNX1-207ENST00000559401 ITFG1Q8TB96 612 aa8.83□□□□□ -1
SNX1-207ENST00000559401 RSAD2Q8WXG1 361 aa8.83□□□□□ -1
SNX1-207ENST00000559401 CCDC127Q96BQ5 260 aa8.83□□□□□ -1
SNX1-207ENST00000559401 MFSD14AQ96MC6 490 aa8.83□□□□□ -1
SNX1-207ENST00000559401 ZNF512Q96ME7 567 aaPredicted RBP8.83□□□□□ -1
SNX1-207ENST00000559401 FNBP1Q96RU3 617 aa8.83□□□□□ -1
SNX1-207ENST00000559401 TMEM209Q96SK2 561 aa8.83□□□□□ -1
SNX1-207ENST00000559401 MFSD1Q9H3U5 465 aa8.83□□□□□ -1
SNX1-207ENST00000559401 GOLPH3LQ9H4A5 285 aa8.83□□□□□ -1
SNX1-207ENST00000559401 INTS13Q9NVM9 706 aa8.83□□□□□ -1
SNX1-207ENST00000559401 IGSF9Q9P2J2 1179 aa8.83□□□□□ -1
SNX1-207ENST00000559401 EPS15L1Q9UBC2 864 aa8.83□□□□□ -1
SNX1-207ENST00000559401 DNMT3BQ9UBC3 853 aaKnown RBP8.83□□□□□ -1
SNX1-207ENST00000559401 CDH7Q9ULB5 785 aa8.83□□□□□ -1
SNX1-207ENST00000559401 YIPF1Q9Y548 306 aa8.83□□□□□ -1
SNX1-207ENST00000559401 TECTAO75443 2155 aa8.83□□□□□ -1
SNX1-207ENST00000559401 PTPRJQ12913 1337 aa8.82□□□□□ -1
SNX1-207ENST00000559401 MTMR11A4FU01 709 aa8.82□□□□□ -1
SNX1-207ENST00000559401 HUS1O60921 280 aa8.82□□□□□ -1
SNX1-207ENST00000559401 ZNF202O95125 648 aa8.82□□□□□ -1
SNX1-207ENST00000559401 KIF20AO95235 890 aa8.82□□□□□ -1
SNX1-207ENST00000559401 MYL1P05976 194 aa8.82□□□□□ -1
SNX1-207ENST00000559401 CFHP08603 1231 aa8.82□□□□□ -1
SNX1-207ENST00000559401 POU2F2P09086 479 aa8.82□□□□□ -1
SNX1-207ENST00000559401 MYL4P12829 197 aa8.82□□□□□ -1
SNX1-207ENST00000559401 ALDH1A3P47895 512 aa8.82□□□□□ -1
SNX1-207ENST00000559401 EPHB3P54753 998 aa8.82□□□□□ -1
SNX1-207ENST00000559401 SNRPFP62306 86 aaKnown RBP8.82□□□□□ -1
SNX1-207ENST00000559401 CYP24A1Q07973 514 aa8.82□□□□□ -1
SNX1-207ENST00000559401 MYO1EQ12965 1108 aa8.82□□□□□ -1
SNX1-207ENST00000559401 STK4Q13043 487 aa8.82□□□□□ -1
SNX1-207ENST00000559401 DUSP4Q13115 394 aa8.82□□□□□ -1
SNX1-207ENST00000559401 GPR17Q13304 367 aa8.82□□□□□ -1
SNX1-207ENST00000559401 PLD1Q13393 1074 aa8.82□□□□□ -1
SNX1-207ENST00000559401 MYBPC2Q14324 1141 aa8.82□□□□□ -1
SNX1-207ENST00000559401 KNOP1Q1ED39 458 aaKnown RBP8.82□□□□□ -1
SNX1-207ENST00000559401 DUOXA2Q1HG44 320 aa8.82□□□□□ -1
SNX1-207ENST00000559401 BMT2Q1RMZ1 405 aa8.82□□□□□ -1
SNX1-207ENST00000559401 CYP4A22Q5TCH4 519 aa8.82□□□□□ -1
SNX1-207ENST00000559401 KRBA2Q6ZNG9 492 aa8.82□□□□□ -1
SNX1-207ENST00000559401 PDZD4Q76G19 769 aaPredicted RBP8.82□□□□□ -1
SNX1-207ENST00000559401 WDR49Q8IV35 697 aa8.82□□□□□ -1
SNX1-207ENST00000559401 FBXL6Q8N531 539 aa8.82□□□□□ -1
SNX1-207ENST00000559401 LRRC52Q8N7C0 313 aa8.82□□□□□ -1
SNX1-207ENST00000559401 KIAA0895Q8NCT3 520 aa8.82□□□□□ -1
SNX1-207ENST00000559401 OR5B17Q8NGF7 314 aa8.82□□□□□ -1
SNX1-207ENST00000559401 OR10T2Q8NGX3 314 aa8.82□□□□□ -1
SNX1-207ENST00000559401 GOLGA5Q8TBA6 731 aa8.82□□□□□ -1
SNX1-207ENST00000559401 FAM200AQ8TCP9 573 aa8.82□□□□□ -1
SNX1-207ENST00000559401 FGF13Q92913 245 aa8.82□□□□□ -1
SNX1-207ENST00000559401 MCRS1Q96EZ8 462 aa8.82□□□□□ -1
SNX1-207ENST00000559401 CGRRF1Q99675 332 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms