RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 ARSJQ5FYB0 599 aaPredicted RBP6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 XKR4Q5GH76 650 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 ANKRD54Q6NXT1 300 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 FUT10Q6P4F1 479 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 SLC39A4Q6P5W5 647 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 SYCE2Q6PIF2 218 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 ALKAL1Q6UXT8 129 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 SV2BQ7L1I2 683 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 TRIM46Q7Z4K8 759 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 APBB1IPQ7Z5R6 666 aaPredicted RBP6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 SFR1Q86XK3 245 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 MAP4K3Q8IVH8 894 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 HASPINQ8TF76 798 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 CHAMP1Q96JM3 812 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 B3GALT6Q96L58 329 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 SNX27Q96L92 541 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 ZMAT2Q96NC0 199 aaKnown RBP6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 CCDC94Q9BW85 323 aaPredicted RBP6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 COLEC11Q9BWP8 271 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 GOLGA2P5Q9HBQ8 144 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 TIMMDC1Q9NPL8 285 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 ADAM28Q9UKQ2 775 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 TBX20Q9UMR3 447 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 USP15Q9Y4E8 981 aaPredicted RBP6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 SMIM28A0A1B0GU29 152 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 FRMD3A2A2Y4 597 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 C2CD2LO14523 706 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 HNRNPDLO14979 420 aaKnown RBP6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 FAM189A1O60320 539 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 CNPP09543 421 aaKnown RBP6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 EPCAMP16422 314 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 SCP2P22307 547 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 IGFBP6P24592 240 aaPredicted RBP6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 GLUD2P49448 558 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 IDH3AP50213 366 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 GTF2BQ00403 316 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 ZP2Q05996 745 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 ZC2HC1CQ53FD0 456 aaPredicted RBP6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 ZBTB41Q5SVQ8 909 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 KIAA0319Q5VV43 1072 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 ATL3Q6DD88 541 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 LRRC69Q6ZNQ3 347 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 FEZF2Q8TBJ5 459 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 KCNG4Q8TDN1 519 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 SLC22A17Q8WUG5 538 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 BICD1Q96G01 975 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 KLHL5Q96PQ7 755 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 TCHPQ9BT92 498 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 STRA6Q9BX79 667 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 S1PR5Q9H228 398 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 IKZF4Q9H2S9 585 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 ST6GALNAC4Q9H4F1 302 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 TOPORSQ9NS56 1045 aaPredicted RBP6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 CHST7Q9NS84 486 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 CNTN3Q9P232 1028 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 STK39Q9UEW8 545 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 DMGDHQ9UI17 866 aaKnown RBP6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 CDH22Q9UJ99 828 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 PCDHA7Q9UN72 937 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 ANK1P16157 1881 aa6.57□□□□□ -1.36
CTDSPL2-204ENST00000558966 SF3B1O75533 1304 aaKnown RBP eCLIP6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 C2orf16Q68DN1 1984 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 A0A0B4J269 797 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 TISP43B9A030 160 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 ANKRD63C9JTQ0 380 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 TMEM189-UBE2V1I3L0A0 370 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 TEX28O15482 410 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 CLDN3O15551 220 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 URODP06132 367 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 SRGAP2BP0DMP2 458 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 CXCL8P10145 99 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 KCNE1P15382 129 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 MSX1P28360 303 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 TNFSF9P41273 254 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 LIG4P49917 911 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 YARSP54577 528 aaKnown RBP6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 DSG1Q02413 1049 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 BMS1Q14692 1282 aaKnown RBP6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 SLC10A6Q3KNW5 377 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 CD300LGQ6UXG3 332 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 ZNF720Q7Z2F6 126 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 ADHFE1Q8IWW8 467 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 TMEM130Q8N3G9 435 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 C3orf58Q8NDZ4 430 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 SUSD6Q92537 303 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 STAMQ92783 540 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 CASP10Q92851 521 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 C18orf25Q96B23 403 aaPredicted RBP6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 DHX58Q96C10 678 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 ACAP3Q96P50 834 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 APOL5Q9BWW9 433 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 FGFBP2Q9BYJ0 223 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 GPAMQ9HCL2 828 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 MRPL17Q9NRX2 175 aaKnown RBP6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 IGSF5Q9NSI5 407 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 KBTBD4Q9NVX7 518 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 SEL1LQ9UBV2 794 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 RCOR1Q9UKL0 485 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 FAM50BQ9Y247 325 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 DENND4AQ7Z401 1863 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms