RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 LDHCP07864 332 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 CELA3BP08861 270 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 OSMP13725 252 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 GSTO1P78417 241 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 DLX2Q07687 328 aaPredicted RBP7.09□□□□□ -1.27
LRRC28-209ENST00000558861 PIN1Q13526 163 aaPredicted RBP7.09□□□□□ -1.27
LRRC28-209ENST00000558861 CLUL1Q15846 466 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 WDR72Q3MJ13 1102 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 BMP2KLQ5H9B9 411 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 PRR31Q5SQ13 230 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 CST9Q5W186 159 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 LYSMD2Q8IV50 215 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 LCORLQ8N3X6 602 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 MIGA1Q8NAN2 632 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 OR5AN1Q8NGI8 311 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 SH3RF3Q8TEJ3 882 aaPredicted RBP7.09□□□□□ -1.27
LRRC28-209ENST00000558861 FAM227BQ96M60 508 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 STRBPQ96SI9 672 aaKnown RBP7.09□□□□□ -1.27
LRRC28-209ENST00000558861 SEC62Q99442 399 aaKnown RBP7.09□□□□□ -1.27
LRRC28-209ENST00000558861 SLC13A1Q9BZW2 595 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 PITHD1Q9GZP4 211 aaPredicted RBP7.09□□□□□ -1.27
LRRC28-209ENST00000558861 DEFB129Q9H1M3 183 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 CD320Q9NPF0 282 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 AATFQ9NY61 560 aaKnown RBP eCLIP7.09□□□□□ -1.27
LRRC28-209ENST00000558861 MAGEL2Q9UJ55 1249 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 SMG5Q9UPR3 1016 aaKnown RBP7.09□□□□□ -1.27
LRRC28-209ENST00000558861 KCTD3Q9Y597 815 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 PCDHGA9Q9Y5G4 932 aaKnown RBP7.09□□□□□ -1.27
LRRC28-209ENST00000558861 PCDHGA8Q9Y5G5 932 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 PCDHGA7Q9Y5G6 932 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 PCDHGA6Q9Y5G7 932 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 PCDHGA3Q9Y5H0 932 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 PCDHGA2Q9Y5H1 932 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 DDX60LQ5H9U9 1706 aaKnown RBP7.09□□□□□ -1.27
LRRC28-209ENST00000558861 ECM29Q5VYK3 1845 aa7.08□□□□□ -1.28
LRRC28-209ENST00000558861 FLT1P17948 1338 aa7.08□□□□□ -1.28
LRRC28-209ENST00000558861 MYPNQ86TC9 1320 aa7.08□□□□□ -1.28
LRRC28-209ENST00000558861 XPOTO43592 962 aaKnown RBP7.08□□□□□ -1.28
LRRC28-209ENST00000558861 OPHN1O60890 802 aa7.08□□□□□ -1.28
LRRC28-209ENST00000558861 ENTPD3O75355 529 aa7.08□□□□□ -1.28
LRRC28-209ENST00000558861 ZFYP08048 801 aaPredicted RBP7.08□□□□□ -1.28
LRRC28-209ENST00000558861 LGALS4P56470 323 aa7.08□□□□□ -1.28
LRRC28-209ENST00000558861 BCAR1P56945 870 aa7.08□□□□□ -1.28
LRRC28-209ENST00000558861 NFATC3Q12968 1075 aa7.08□□□□□ -1.28
LRRC28-209ENST00000558861 VWA3BQ502W6 1294 aa7.08□□□□□ -1.28
LRRC28-209ENST00000558861 TRMT10BQ6PF06 316 aaKnown RBP7.08□□□□□ -1.28
LRRC28-209ENST00000558861 ZNF589Q86UQ0 364 aaPredicted RBP7.08□□□□□ -1.28
LRRC28-209ENST00000558861 APOBEC3FQ8IUX4 373 aaKnown RBP7.08□□□□□ -1.28
LRRC28-209ENST00000558861 FAM151AQ8WW52 585 aa7.08□□□□□ -1.28
LRRC28-209ENST00000558861 PPP1R16BQ96T49 567 aa7.08□□□□□ -1.28
LRRC28-209ENST00000558861 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.08□□□□□ -1.28
LRRC28-209ENST00000558861 TMEM39BQ9GZU3 492 aa7.08□□□□□ -1.28
LRRC28-209ENST00000558861 USP40Q9NVE5 1235 aa7.08□□□□□ -1.28
LRRC28-209ENST00000558861 LUC7L2Q9Y383 392 aaKnown RBP7.08□□□□□ -1.28
LRRC28-209ENST00000558861 SPEF1Q9Y4P9 236 aa7.08□□□□□ -1.28
LRRC28-209ENST00000558861 NUMBLQ9Y6R0 609 aa7.08□□□□□ -1.28
LRRC28-209ENST00000558861 DDTLA6NHG4 134 aaPredicted RBP7.07□□□□□ -1.28
LRRC28-209ENST00000558861 TCP10L2B9ZVM9 353 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 H0Y858 1186 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 SMIM22K7EJ46 135 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 PRKAB2O43741 272 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 MBD4O95243 580 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 ZNF28P17035 718 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 CHMLP26374 656 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 RBM5P52756 815 aaKnown RBP eCLIP7.07□□□□□ -1.28
LRRC28-209ENST00000558861 GABPAQ06546 454 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 PPARAQ07869 468 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 ODF1Q14990 250 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 ACAP2Q15057 778 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 LRRC41Q15345 812 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 GRAMD4Q6IC98 578 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 ZSCAN25Q6NSZ9 544 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 KCNK18Q7Z418 384 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 SAPCD2Q86UD0 394 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 CERS3Q8IU89 383 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 ADGRG2Q8IZP9 1017 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 DCPSQ96C86 337 aaKnown RBP7.07□□□□□ -1.28
LRRC28-209ENST00000558861 CDCA5Q96FF9 252 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 FSD1Q9BTV5 496 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 OSBPL5Q9H0X9 879 aaPredicted RBP7.07□□□□□ -1.28
LRRC28-209ENST00000558861 WNT8AQ9H1J5 351 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 DNAJC18Q9H819 358 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 ARMT1Q9H993 441 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 VEZTQ9HBM0 779 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 ZIM2Q9NZV7 527 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 KCMF1Q9P0J7 381 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 DPP7Q9UHL4 492 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 USP18Q9UMW8 372 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 PAPPA2Q9BXP8 1791 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 MYH7P12883 1935 aa7.07□□□□□ -1.28
LRRC28-209ENST00000558861 SIPA1L1O43166 1804 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 A0A0A6YYJ9 748 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 GPAA1O43292 621 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 MARCH6O60337 910 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 MAFO75444 373 aaPredicted RBP7.06□□□□□ -1.28
LRRC28-209ENST00000558861 BAG3O95817 575 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 TSPAN15O95858 294 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 CCND1P24385 295 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 MTNR1BP49286 362 aa7.06□□□□□ -1.28
LRRC28-209ENST00000558861 ANTXR2P58335 489 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms