RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 TPGS2Q68CL5 300 aa13.07□□□□□ -0.32
SMAD3-206ENST00000558739 ANO7Q6IWH7 933 aa13.07□□□□□ -0.32
SMAD3-206ENST00000558739 SYT13Q7L8C5 426 aa13.07□□□□□ -0.32
SMAD3-206ENST00000558739 HAUS6Q7Z4H7 955 aa13.07□□□□□ -0.32
SMAD3-206ENST00000558739 EXOC8Q8IYI6 725 aa13.07□□□□□ -0.32
SMAD3-206ENST00000558739 TTC9BQ8N6N2 239 aa13.07□□□□□ -0.32
SMAD3-206ENST00000558739 LEMD2Q8NC56 503 aa13.07□□□□□ -0.32
SMAD3-206ENST00000558739 BPIFB1Q8TDL5 484 aa13.07□□□□□ -0.32
SMAD3-206ENST00000558739 AFF4Q9UHB7 1163 aaKnown RBP13.07□□□□□ -0.32
SMAD3-206ENST00000558739 EVLQ9UI08 416 aaPredicted RBP13.07□□□□□ -0.32
SMAD3-206ENST00000558739 CCL26Q9Y258 94 aa13.07□□□□□ -0.32
SMAD3-206ENST00000558739 NOTCH2Q04721 2471 aa13.07□□□□□ -0.32
SMAD3-206ENST00000558739 HELZP42694 1942 aaKnown RBP13.07□□□□□ -0.32
SMAD3-206ENST00000558739 UBR5O95071 2799 aaPredicted RBP13.06□□□□□ -0.32
SMAD3-206ENST00000558739 H0Y626 953 aa13.06□□□□□ -0.32
SMAD3-206ENST00000558739 TRIM16O95361 564 aa13.06□□□□□ -0.32
SMAD3-206ENST00000558739 MCM2P49736 904 aa13.06□□□□□ -0.32
SMAD3-206ENST00000558739 POU5F1BQ06416 359 aa13.06□□□□□ -0.32
SMAD3-206ENST00000558739 CCNI2Q6ZMN8 369 aaPredicted RBP13.06□□□□□ -0.32
SMAD3-206ENST00000558739 PPP4R3CPQ6ZMV5 832 aa13.06□□□□□ -0.32
SMAD3-206ENST00000558739 MAEAQ7L5Y9 396 aa13.06□□□□□ -0.32
SMAD3-206ENST00000558739 CEP120Q8N960 986 aa13.06□□□□□ -0.32
SMAD3-206ENST00000558739 BICD2Q8TD16 824 aa13.06□□□□□ -0.32
SMAD3-206ENST00000558739 RLN3Q8WXF3 142 aa13.06□□□□□ -0.32
SMAD3-206ENST00000558739 BSNDQ8WZ55 320 aa13.06□□□□□ -0.32
SMAD3-206ENST00000558739 FNBP1Q96RU3 617 aa13.06□□□□□ -0.32
SMAD3-206ENST00000558739 FAM83CQ9BQN1 747 aa13.06□□□□□ -0.32
SMAD3-206ENST00000558739 GPR88Q9GZN0 384 aa13.06□□□□□ -0.32
SMAD3-206ENST00000558739 KCNMB3Q9NPA1 279 aa13.06□□□□□ -0.32
SMAD3-206ENST00000558739 SCUBE2Q9NQ36 999 aa13.06□□□□□ -0.32
SMAD3-206ENST00000558739 GKN1Q9NS71 199 aa13.06□□□□□ -0.32
SMAD3-206ENST00000558739 DENND4CQ5VZ89 1909 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 KNTC1P50748 2209 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 PODXLO00592 558 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 PRPF3O43395 683 aaKnown RBP13.05□□□□□ -0.32
SMAD3-206ENST00000558739 TRAPPC3O43617 180 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 CPB1P15086 417 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 LIG1P18858 919 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 GALK1P51570 392 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 PLCB2Q00722 1185 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 LMAN2Q12907 356 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 NECTIN1Q15223 517 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 NPY5RQ15761 445 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 INF2Q27J81 1249 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 ZNF423Q2M1K9 1284 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 ADCK5Q3MIX3 580 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 CDCA2Q69YH5 1023 aaPredicted RBP13.05□□□□□ -0.32
SMAD3-206ENST00000558739 NCAPH2Q6IBW4 605 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 TMEFF1Q8IYR6 380 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 MDGA1Q8NFP4 955 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 TSTD1Q8NFU3 115 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 SLC39A7Q92504 469 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 HAS1Q92839 578 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 ZMAT2Q96NC0 199 aaKnown RBP13.05□□□□□ -0.32
SMAD3-206ENST00000558739 GTPBP2Q9BX10 602 aaKnown RBP13.05□□□□□ -0.32
SMAD3-206ENST00000558739 ATXN3LQ9H3M9 355 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 FZD8Q9H461 694 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 OBSL1O75147 1896 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 CEP192Q8TEP8 1941 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 CITO14578 2027 aa13.05□□□□□ -0.32
SMAD3-206ENST00000558739 SMIM28A0A1B0GU29 152 aa13.04□□□□□ -0.32
SMAD3-206ENST00000558739 UPK3BL1B0FP48 263 aa13.04□□□□□ -0.32
SMAD3-206ENST00000558739 UPK3BL2E5RIL1 263 aa13.04□□□□□ -0.32
SMAD3-206ENST00000558739 PYCARD-AS1I3L0S3 204 aa13.04□□□□□ -0.32
SMAD3-206ENST00000558739 SYN3O14994 580 aa13.04□□□□□ -0.32
SMAD3-206ENST00000558739 N4BP3O15049 544 aa13.04□□□□□ -0.32
SMAD3-206ENST00000558739 USO1O60763 962 aaKnown RBP13.04□□□□□ -0.32
SMAD3-206ENST00000558739 CFIP05156 583 aa13.04□□□□□ -0.32
SMAD3-206ENST00000558739 FTH1P19P0C7X4 201 aa13.04□□□□□ -0.32
SMAD3-206ENST00000558739 CD59P13987 128 aa13.04□□□□□ -0.32
SMAD3-206ENST00000558739 HNRNPLP14866 589 aaKnown RBP eCLIP13.04□□□□□ -0.32
SMAD3-206ENST00000558739 CPA1P15085 419 aa13.04□□□□□ -0.32
SMAD3-206ENST00000558739 GABRR2P28476 465 aa13.04□□□□□ -0.32
SMAD3-206ENST00000558739 DUSP4Q13115 394 aa13.04□□□□□ -0.32
SMAD3-206ENST00000558739 TMEM132AQ24JP5 1023 aa13.04□□□□□ -0.32
SMAD3-206ENST00000558739 ZNF280DQ6N043 979 aa13.04□□□□□ -0.32
SMAD3-206ENST00000558739 OTUD6AQ7L8S5 288 aa13.04□□□□□ -0.32
SMAD3-206ENST00000558739 TPH2Q8IWU9 490 aa13.04□□□□□ -0.32
SMAD3-206ENST00000558739 CCDC148Q8NFR7 591 aa13.04□□□□□ -0.32
SMAD3-206ENST00000558739 C18orf25Q96B23 403 aaPredicted RBP13.04□□□□□ -0.32
SMAD3-206ENST00000558739 UROC1Q96N76 676 aa13.04□□□□□ -0.32
SMAD3-206ENST00000558739 NUSAP1Q9BXS6 441 aaKnown RBP13.04□□□□□ -0.32
SMAD3-206ENST00000558739 SLC27A5Q9Y2P5 690 aa13.04□□□□□ -0.32
SMAD3-206ENST00000558739 RAI2Q9Y5P3 530 aa13.04□□□□□ -0.32
SMAD3-206ENST00000558739 PLXND1Q9Y4D7 1925 aa13.03□□□□□ -0.32
SMAD3-206ENST00000558739 CABIN1Q9Y6J0 2220 aa13.03□□□□□ -0.32
SMAD3-206ENST00000558739 H7C4K7 107 aa13.03□□□□□ -0.32
SMAD3-206ENST00000558739 M0R2N6 131 aa13.03□□□□□ -0.32
SMAD3-206ENST00000558739 DKC1O60832 514 aaKnown RBP eCLIP13.03□□□□□ -0.32
SMAD3-206ENST00000558739 ITPKAP23677 461 aa13.03□□□□□ -0.32
SMAD3-206ENST00000558739 PSMD2Q13200 908 aa13.03□□□□□ -0.32
SMAD3-206ENST00000558739 PRPF4BQ13523 1007 aaKnown RBP13.03□□□□□ -0.32
SMAD3-206ENST00000558739 RUNX3Q13761 415 aa13.03□□□□□ -0.32
SMAD3-206ENST00000558739 EPHA7Q15375 998 aa13.03□□□□□ -0.32
SMAD3-206ENST00000558739 NTRK3Q16288 839 aa13.03□□□□□ -0.32
SMAD3-206ENST00000558739 USP39Q53GS9 565 aaKnown RBP13.03□□□□□ -0.32
SMAD3-206ENST00000558739 RASSF3Q86WH2 238 aa13.03□□□□□ -0.32
SMAD3-206ENST00000558739 TTC30AQ86WT1 665 aa13.03□□□□□ -0.32
SMAD3-206ENST00000558739 ZNF843Q8N446 348 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms