RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 RECQL4O94761 1208 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 EIF4BP23588 611 aaKnown RBP11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 DYNLT1P63172 113 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 C17orf99Q6UX52 265 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 EMC1Q8N766 993 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 TMEM35BQ8NCS4 154 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 MSANTD4Q8NCY6 345 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 UHMK1Q8TAS1 419 aaKnown RBP11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 TMEM40Q8WWA1 233 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 C1orf54Q8WWF1 131 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 ISCUQ9H1K1 167 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 ACBD3Q9H3P7 528 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 TUBGCP4Q9UGJ1 667 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 PPEF2O14830 753 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 SLC10A3P09131 477 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 ZNF865P0CJ78 1059 aaPredicted RBP11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 MCF2P10911 925 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 GZMAP12544 262 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 P4HA1P13674 534 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 TTC31Q49AM3 519 aaPredicted RBP11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 BEND6Q5SZJ8 279 aaPredicted RBP11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 NOTUMQ6P988 496 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 C15orf39Q6ZRI6 1047 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 C12orf29Q8N999 325 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 TFAP2BQ92481 460 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 KAT2BQ92831 832 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 ZWILCHQ9H900 591 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 TJP2Q9UDY2 1190 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 PCSK1NQ9UHG2 260 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 ADAM21Q9UKJ8 722 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 SMIM23A6NLE4 172 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 RPL7AP62424 266 aaKnown RBP11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 TUBB4BP68371 445 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 PPP1R7Q15435 360 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 SMTNL2Q2TAL5 461 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 MORN1Q5T089 497 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 ACOT1Q86TX2 421 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 SOCS4Q8WXH5 440 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 TRIB2Q92519 343 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 FAM81BQ96LP2 452 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 BCCIPQ9P287 314 aaKnown RBP eCLIP11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 LOXHD1Q8IVV2 1947 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 A6NJR5 290 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 UNCXA6NJT0 531 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 IL18RAPO95256 599 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 PYGMP11217 842 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 PRLRP16471 622 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 ADORA2BP29275 332 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 CTGFP29279 349 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 THPOP40225 353 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 AP3M2P53677 418 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 MYO1EQ12965 1108 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 CCDC26Q8TAB7 109 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 ATG4AQ8WYN0 398 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 FUT8Q9BYC5 575 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 MIS12Q9H081 205 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 RNF39Q9H2S5 420 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 DNAJC17Q9NVM6 304 aaKnown RBP11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 PPME1Q9Y570 386 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 A0A0A6YYK5 440 aaPredicted RBP11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 TMEM88BA6NKF7 163 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 O00370 1275 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 DAPK3O43293 454 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 PRKAR2AP13861 404 aaKnown RBP11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 CTNNA2P26232 953 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 RWDD2BP57060 319 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 PSMC1P62191 440 aaKnown RBP11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 NBPF20Q3BBV1 942 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 DENND1BQ6P3S1 775 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 SCYL2Q6P3W7 929 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 DDX1Q92499 740 aaKnown RBP11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 ZFP42Q96MM3 310 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 TWNKQ96RR1 684 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 LPIN3Q9BQK8 851 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 XPNPEP3Q9NQH7 507 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 SNX24Q9Y343 169 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 PDE4DIPQ5VU43 2346 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 MROH7Q68CQ1 1323 aa11.48□□□□□ -0.57
CSPG4P5-201ENST00000558731 SYNJ2BP-COX16A0A087WUM0 186 aa11.47□□□□□ -0.57
CSPG4P5-201ENST00000558731 HCRTO43612 131 aa11.47□□□□□ -0.57
CSPG4P5-201ENST00000558731 ACO1P21399 889 aaKnown RBP11.47□□□□□ -0.57
CSPG4P5-201ENST00000558731 NDST1P52848 882 aa11.47□□□□□ -0.57
CSPG4P5-201ENST00000558731 YWHAEP62258 255 aaKnown RBP11.47□□□□□ -0.57
CSPG4P5-201ENST00000558731 HIC1Q14526 733 aa11.47□□□□□ -0.57
CSPG4P5-201ENST00000558731 ATP13A4Q4VNC1 1196 aa11.47□□□□□ -0.57
CSPG4P5-201ENST00000558731 OR6B2Q6IFH4 312 aa11.47□□□□□ -0.57
CSPG4P5-201ENST00000558731 SLC27A1Q6PCB7 646 aa11.47□□□□□ -0.57
CSPG4P5-201ENST00000558731 GSTA5Q7RTV2 222 aa11.47□□□□□ -0.57
CSPG4P5-201ENST00000558731 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P5-201ENST00000558731 RAET1EQ8TD07 263 aa11.47□□□□□ -0.57
CSPG4P5-201ENST00000558731 UBLCP1Q8WVY7 318 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P5-201ENST00000558731 LPPQ93052 612 aa11.47□□□□□ -0.57
CSPG4P5-201ENST00000558731 C18orf8Q96DM3 657 aa11.47□□□□□ -0.57
CSPG4P5-201ENST00000558731 ZSWIM1Q9BR11 485 aa11.47□□□□□ -0.57
CSPG4P5-201ENST00000558731 SYT11Q9BT88 431 aa11.47□□□□□ -0.57
CSPG4P5-201ENST00000558731 COX16Q9P0S2 106 aa11.47□□□□□ -0.57
CSPG4P5-201ENST00000558731 SIX4Q9UIU6 781 aa11.47□□□□□ -0.57
CSPG4P5-201ENST00000558731 MTUS1Q9ULD2 1270 aa11.47□□□□□ -0.57
CSPG4P5-201ENST00000558731 UTP11Q9Y3A2 253 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms