RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 CLIC2O15247 247 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 EXOC3O60645 756 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 KINO60870 393 aaKnown RBP9.15□□□□□ -0.94
TPM1-213ENST00000558400 XYLBO75191 536 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 CYP11A1P05108 521 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 POU2F2P09086 479 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 FAM163BP0C2L3 166 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 SPATA31D3P0C874 917 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 ATF2P15336 505 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 TNNI1P19237 187 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 IGFBP6P24592 240 aaPredicted RBP9.15□□□□□ -0.94
TPM1-213ENST00000558400 SMARCB1Q12824 385 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 MYO1EQ12965 1108 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 PPM1LQ5SGD2 360 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 OVOS1Q6IE37 1185 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 SPATA31D4Q6ZUB0 917 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 DPH6Q7L8W6 267 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 OTOP3Q7RTS5 596 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 CBWD2Q8IUF1 395 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 WDR49Q8IV35 697 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 GLYCTKQ8IVS8 523 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 GUF1Q8N442 669 aaKnown RBP9.15□□□□□ -0.94
TPM1-213ENST00000558400 LRRC52Q8N7C0 313 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 RDH13Q8NBN7 331 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 KIAA0895Q8NCT3 520 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 SPATA18Q8TC71 538 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 SMG7Q92540 1137 aaKnown RBP9.15□□□□□ -0.94
TPM1-213ENST00000558400 RPGRIP1Q96KN7 1286 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 MFSD14AQ96MC6 490 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 PHOX2BQ99453 314 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 APOL5Q9BWW9 433 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 WDR6Q9NNW5 1121 aaKnown RBP9.15□□□□□ -0.94
TPM1-213ENST00000558400 DMAC2Q9NW81 257 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.15□□□□□ -0.94
TPM1-213ENST00000558400 FBXL5Q9UKA1 691 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 FBXW11Q9UKB1 542 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 AGAP1Q9UPQ3 857 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 TRAF3IP3Q9Y228 551 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 FRMD4BQ9Y2L6 1034 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 CITO14578 2027 aa9.15□□□□□ -0.94
TPM1-213ENST00000558400 TECTAO75443 2155 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 PRRG1O14668 218 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 IKBKBO14920 756 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 MAPK13O15264 365 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 DCXO43602 365 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 HUS1O60921 280 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 C8AP07357 584 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 C7P10643 843 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 TIE1P35590 1138 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 PPP1R2P41236 205 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 CYP2J2P51589 502 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 GUCY2FP51841 1108 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 ROR1Q01973 937 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 CYP24A1Q07973 514 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 GPR17Q13304 367 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 PSMD6Q15008 389 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 NFIL3Q16649 462 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 EFCAB13Q8IY85 973 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 TCEAL8Q8IYN2 117 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 ZDHHC14Q8IZN3 488 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 TMEM86AQ8N2M4 240 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 C1orf127Q8N9H9 656 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 ZSWIM2Q8NEG5 633 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 SMARCE1Q969G3 411 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 KCTD10Q9H3F6 313 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 POMKQ9H5K3 350 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 GDAP2Q9NXN4 497 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 HSFX1Q9UBD0 423 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 AFF4Q9UHB7 1163 aaKnown RBP9.14□□□□□ -0.95
TPM1-213ENST00000558400 ZFP37Q9Y6Q3 630 aaPredicted RBP9.14□□□□□ -0.95
TPM1-213ENST00000558400 USP34Q70CQ2 3546 aa9.14□□□□□ -0.95
TPM1-213ENST00000558400 TRIP11Q15643 1979 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 TCHHQ07283 1943 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 PLXNA3P51805 1871 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 ADAM12O43184 909 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 RFPL2O75678 378 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 LRG1P02750 347 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 NR3C1P04150 777 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 ITGB3P05106 788 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 KRT19P08727 400 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 DLATP10515 647 aaKnown RBP9.13□□□□□ -0.95
TPM1-213ENST00000558400 CPB1P15086 417 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 PTPN2P17706 415 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 POLR2BP30876 1174 aaKnown RBP9.13□□□□□ -0.95
TPM1-213ENST00000558400 ATICP31939 592 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 LHX1P48742 406 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 ARPP19P56211 112 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 UBE2HP62256 183 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 ENPEPQ07075 957 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 TRPC3Q13507 836 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 PNOCQ13519 176 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 STIM1Q13586 685 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 COBLL1Q53SF7 1204 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 ZNF658Q5TYW1 1059 aaPredicted RBP9.13□□□□□ -0.95
TPM1-213ENST00000558400 RSPO2Q6UXX9 243 aaPredicted RBP9.13□□□□□ -0.95
TPM1-213ENST00000558400 TRAPPC11Q7Z392 1133 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 RNF135Q8IUD6 432 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 DCP1BQ8IZD4 617 aaKnown RBP9.13□□□□□ -0.95
TPM1-213ENST00000558400 ELMOD1Q8N336 334 aa9.13□□□□□ -0.95
TPM1-213ENST00000558400 TDRD5Q8NAT2 981 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms