RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 ZFPM1Q8IX07 1006 aa7.8□□□□□ -1.16
MARK3-212ENST00000558223 SYT2Q8N9I0 419 aaPredicted RBP7.8□□□□□ -1.16
MARK3-212ENST00000558223 NAXEQ8NCW5 288 aa7.8□□□□□ -1.16
MARK3-212ENST00000558223 SLC17A8Q8NDX2 589 aa7.8□□□□□ -1.16
MARK3-212ENST00000558223 RABGGTAQ92696 567 aa7.8□□□□□ -1.16
MARK3-212ENST00000558223 CNOT6LQ96LI5 555 aaKnown RBP7.8□□□□□ -1.16
MARK3-212ENST00000558223 EIF3CQ99613 913 aaKnown RBP7.8□□□□□ -1.16
MARK3-212ENST00000558223 RANBP17Q9H2T7 1088 aaKnown RBP7.8□□□□□ -1.16
MARK3-212ENST00000558223 CPVLQ9H3G5 476 aa7.8□□□□□ -1.16
MARK3-212ENST00000558223 NDST4Q9H3R1 872 aa7.8□□□□□ -1.16
MARK3-212ENST00000558223 CACNA2D2Q9NY47 1150 aa7.8□□□□□ -1.16
MARK3-212ENST00000558223 OGFRQ9NZT2 677 aa7.8□□□□□ -1.16
MARK3-212ENST00000558223 PIM2Q9P1W9 311 aa7.8□□□□□ -1.16
MARK3-212ENST00000558223 KCNG1Q9UIX4 513 aa7.8□□□□□ -1.16
MARK3-212ENST00000558223 ZNF215Q9UL58 517 aaPredicted RBP7.8□□□□□ -1.16
MARK3-212ENST00000558223 SOX13Q9UN79 622 aa7.8□□□□□ -1.16
MARK3-212ENST00000558223 UBE4BO95155 1302 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 CDK5RAP2Q96SN8 1893 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 SSU72P8A0A1W2PR75 194 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 PRAMEF27A3QJZ7 478 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 H3BRJ5 948 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 PES1O00541 588 aaKnown RBP7.79□□□□□ -1.16
MARK3-212ENST00000558223 PDXKO00764 312 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 ADAMTS3O15072 1205 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 CLEC3AO75596 197 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 NDUFA10O95299 355 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 GDF11O95390 407 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 MYBP10242 640 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 PTPRAP18433 802 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 POLD1P28340 1107 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 CHRNA5P30532 468 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 GRK4P32298 578 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 GBP1P32455 592 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 CAP2P40123 477 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 TM4SF4P48230 202 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 FXR1P51114 621 aaKnown RBP eCLIP7.79□□□□□ -1.16
MARK3-212ENST00000558223 GPLD1P80108 840 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 GUCY1A3Q02108 690 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 GHRHRQ02643 423 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 MLLT1Q03111 559 aaPredicted RBP7.79□□□□□ -1.16
MARK3-212ENST00000558223 SPEM2Q0P670 501 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 MAP4K2Q12851 820 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 ALCAMQ13740 583 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 IKBKEQ14164 716 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 LLGL1Q15334 1064 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 NFIL3Q16649 462 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 UBE2SQ16763 222 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 KIF4BQ2VIQ3 1234 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 PRR16Q569H4 304 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 HSP90AA4PQ58FG1 418 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 HERC4Q5GLZ8 1057 aaPredicted RBP7.79□□□□□ -1.16
MARK3-212ENST00000558223 C10orf76Q5T2E6 689 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 CIAPIN1Q6FI81 312 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 MZT2BQ6NZ67 158 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 FIGNL1Q6PIW4 674 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 TRIM59Q8IWR1 403 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 MICALL1Q8N3F8 863 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 ZNF513Q8N8E2 541 aaPredicted RBP7.79□□□□□ -1.16
MARK3-212ENST00000558223 CLRN3Q8NCR9 226 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 KIAA0895Q8NCT3 520 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 GOLGA5Q8TBA6 731 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 ETNPPLQ8TBG4 499 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 CHTF18Q8WVB6 975 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 GOLGA1Q92805 767 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 DNAJC19Q96DA6 116 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 PKNOX2Q96KN3 472 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 MRGPRX3Q96LB0 322 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 CCDC42Q96M95 316 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 FAM193BQ96PV7 902 aaPredicted RBP7.79□□□□□ -1.16
MARK3-212ENST00000558223 TBCBQ99426 244 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 PLIN2Q99541 437 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 RIT2Q99578 217 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 NAPGQ99747 312 aaPredicted RBP7.79□□□□□ -1.16
MARK3-212ENST00000558223 TIPINQ9BVW5 301 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 CDC23Q9UJX2 597 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 MYO6Q9UM54 1294 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 PLAGL2Q9UPG8 496 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 TRAF3IP3Q9Y228 551 aa7.79□□□□□ -1.16
MARK3-212ENST00000558223 CTDP1Q9Y5B0 961 aaPredicted RBP7.79□□□□□ -1.16
MARK3-212ENST00000558223 BZW2Q9Y6E2 419 aaKnown RBP7.79□□□□□ -1.16
MARK3-212ENST00000558223 TTC26A0AVF1 554 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 DCDC2BA2VCK2 349 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 YDJCA8MPS7 323 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 TRAF5O00463 557 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 RGS13O14921 159 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 WDR46O15213 610 aaKnown RBP7.78□□□□□ -1.16
MARK3-212ENST00000558223 EIF3DO15371 548 aaKnown RBP eCLIP7.78□□□□□ -1.16
MARK3-212ENST00000558223 SLC16A3O15427 465 aaKnown RBP7.78□□□□□ -1.16
MARK3-212ENST00000558223 EFSO43281 561 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 EDIL3O43854 480 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 PCDHGA12O60330 932 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 DKC1O60832 514 aaKnown RBP eCLIP7.78□□□□□ -1.16
MARK3-212ENST00000558223 MAPTP10636 758 aaKnown RBP7.78□□□□□ -1.16
MARK3-212ENST00000558223 CYP11B2P19099 503 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 SCP2P22307 547 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 ABCD1P33897 745 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 SNRPFP62306 86 aaKnown RBP7.78□□□□□ -1.16
MARK3-212ENST00000558223 CKAP4Q07065 602 aaKnown RBP7.78□□□□□ -1.16
MARK3-212ENST00000558223 KIF5AQ12840 1032 aa7.78□□□□□ -1.16
MARK3-212ENST00000558223 COASYQ13057 564 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms