RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 PDZD7Q9H5P4 517 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 RNF186Q9NXI6 227 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 MYO1AQ9UBC5 1043 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 NAGPAQ9UK23 515 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 MRFAP1Q9Y605 127 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 NRCAMQ92823 1304 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 MYH9P35579 1960 aaKnown RBP7.93□□□□□ -1.14
SPG11-204ENST00000557866 MYH11P35749 1972 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 DOCK3Q8IZD9 2030 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 SMIM35A0A1B0GVV1 85 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 MACROD2A1Z1Q3 448 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 CYP26A1O43174 497 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 TREHO43280 583 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 KRT86O43790 486 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 ZEB2O60315 1214 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 TSPAN1O60635 241 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 ZC3H11AO75152 810 aaKnown RBP eCLIP7.93□□□□□ -1.14
SPG11-204ENST00000557866 MOCS3O95396 460 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 SGPL1O95470 568 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 CST3P01034 146 aaPredicted RBP7.93□□□□□ -1.14
SPG11-204ENST00000557866 CALCAP01258 141 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 TFRCP02786 760 aaKnown RBP7.93□□□□□ -1.14
SPG11-204ENST00000557866 CHRNB2P17787 502 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 ARF4P18085 180 aaPredicted RBP7.93□□□□□ -1.14
SPG11-204ENST00000557866 ACO1P21399 889 aaKnown RBP7.93□□□□□ -1.14
SPG11-204ENST00000557866 GJA9P57773 515 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 NKX3-2P78367 333 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 SP3Q02447 781 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 CACNB2Q08289 660 aaPredicted RBP7.93□□□□□ -1.14
SPG11-204ENST00000557866 KIF5AQ12840 1032 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 HSP90AA2PQ14568 343 aaPredicted RBP7.93□□□□□ -1.14
SPG11-204ENST00000557866 NAA30Q147X3 362 aaPredicted RBP7.93□□□□□ -1.14
SPG11-204ENST00000557866 NAB2Q15742 525 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 KIZQ2M2Z5 673 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 ZNF568Q3ZCX4 644 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 SPOPLQ6IQ16 392 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 ALKBH5Q6P6C2 394 aaKnown RBP7.93□□□□□ -1.14
SPG11-204ENST00000557866 SRGAP1Q7Z6B7 1085 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 USP37Q86T82 979 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 ZNF410Q86VK4 478 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 PALB2Q86YC2 1186 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 EFCAB13Q8IY85 973 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 THNSL1Q8IYQ7 743 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 PPM1KQ8N3J5 372 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 U2AF1L4Q8WU68 220 aaKnown RBP7.93□□□□□ -1.14
SPG11-204ENST00000557866 VTI1AQ96AJ9 217 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 MAP7D2Q96T17 732 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 PCDHB18PQ96TA0 734 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 NAPGQ99747 312 aaPredicted RBP7.93□□□□□ -1.14
SPG11-204ENST00000557866 ARID3AQ99856 593 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 TCHPQ9BT92 498 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 FAM49AQ9H0Q0 323 aaPredicted RBP7.93□□□□□ -1.14
SPG11-204ENST00000557866 UPF3AQ9H1J1 476 aaKnown RBP7.93□□□□□ -1.14
SPG11-204ENST00000557866 ACP6Q9NPH0 428 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 NDFIP2Q9NV92 336 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 TAS2R14Q9NYV8 317 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 HDAC6Q9UBN7 1215 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 GDF2Q9UK05 429 aaPredicted RBP7.93□□□□□ -1.14
SPG11-204ENST00000557866 NOCTQ9UK39 431 aaKnown RBP7.93□□□□□ -1.14
SPG11-204ENST00000557866 CAPN6Q9Y6Q1 641 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 UMODL1Q5DID0 1318 aa7.93□□□□□ -1.14
SPG11-204ENST00000557866 SIP14410 1827 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 CTAGE9A4FU28 777 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 LACTBL1A8MY62 500 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 ENC1O14682 589 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 BNIP3LO60238 219 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 B4GALT4O60513 344 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 SLU7O95391 586 aaKnown RBP7.92□□□□□ -1.14
SPG11-204ENST00000557866 PGK1P00558 417 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 ATP1A1P05023 1023 aaKnown RBP7.92□□□□□ -1.14
SPG11-204ENST00000557866 STAG3L1P0CL83 205 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 CXCL8P10145 99 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 MCF2P10911 925 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 CYP2C9P11712 490 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 ELNP15502 786 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 CCND3P30281 292 aaPredicted RBP7.92□□□□□ -1.14
SPG11-204ENST00000557866 HOXA11P31270 313 aaPredicted RBP7.92□□□□□ -1.14
SPG11-204ENST00000557866 PIK3CAP42336 1068 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 MFAP3P55082 362 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 OSTNP61366 133 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 GCNT1Q02742 428 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 TMEM62Q0P6H9 643 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 BIRC3Q13489 604 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 BMS1Q14692 1282 aaKnown RBP7.92□□□□□ -1.14
SPG11-204ENST00000557866 C10orf76Q5T2E6 689 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 TRAPPC11Q7Z392 1133 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 NOP9Q86U38 636 aaKnown RBP7.92□□□□□ -1.14
SPG11-204ENST00000557866 SLC47A2Q86VL8 602 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 WDR49Q8IV35 697 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 GLYCTKQ8IVS8 523 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 RPUSD2Q8IZ73 545 aaKnown RBP7.92□□□□□ -1.14
SPG11-204ENST00000557866 ZNF295-AS1Q8N0V1 137 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 UBR7Q8N806 425 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 DNAJB3Q8WWF6 145 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 DDX1Q92499 740 aaKnown RBP7.92□□□□□ -1.14
SPG11-204ENST00000557866 SECISBP2LQ93073 1101 aaKnown RBP7.92□□□□□ -1.14
SPG11-204ENST00000557866 OSMRQ99650 979 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 AGPAT1Q99943 283 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 CARD6Q9BX69 1037 aa7.92□□□□□ -1.14
SPG11-204ENST00000557866 ZCCHC2Q9C0B9 1178 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms