RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 KLHL5Q96PQ7 755 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 POP1Q99575 1024 aaKnown RBP14.72□□□□□ -0.05
SHMT2-234ENST00000557703 DNAI2Q9GZS0 605 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 HSFX1Q9UBD0 423 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 CACNG4Q9UBN1 327 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 COQ4Q9Y3A0 265 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 PTPRJQ12913 1337 aa14.71□□□□□ -0.05
SHMT2-234ENST00000557703 TEX28O15482 410 aa14.71□□□□□ -0.05
SHMT2-234ENST00000557703 CLASP2O75122 1294 aaKnown RBP14.71□□□□□ -0.05
SHMT2-234ENST00000557703 TACC1O75410 805 aa14.71□□□□□ -0.05
SHMT2-234ENST00000557703 PAPLNO95428 1278 aa14.71□□□□□ -0.05
SHMT2-234ENST00000557703 GLUD1P00367 558 aa14.71□□□□□ -0.05
SHMT2-234ENST00000557703 TKTP29401 623 aaKnown RBP14.71□□□□□ -0.05
SHMT2-234ENST00000557703 TDRD10Q5VZ19 366 aaKnown RBP14.71□□□□□ -0.05
SHMT2-234ENST00000557703 OVOS1Q6IE37 1185 aa14.71□□□□□ -0.05
SHMT2-234ENST00000557703 TRIM59Q8IWR1 403 aa14.71□□□□□ -0.05
SHMT2-234ENST00000557703 FBXL13Q8NEE6 735 aa14.71□□□□□ -0.05
SHMT2-234ENST00000557703 PLEKHO2Q8TD55 490 aa14.71□□□□□ -0.05
SHMT2-234ENST00000557703 SLC35C1Q96A29 364 aa14.71□□□□□ -0.05
SHMT2-234ENST00000557703 BPIFA3Q9BQP9 254 aa14.71□□□□□ -0.05
SHMT2-234ENST00000557703 FAM50BQ9Y247 325 aa14.71□□□□□ -0.05
SHMT2-234ENST00000557703 SPTLC1O15269 473 aa14.7□□□□□ -0.06
SHMT2-234ENST00000557703 ASS1P00966 412 aaKnown RBP14.7□□□□□ -0.06
SHMT2-234ENST00000557703 CST3P01034 146 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-234ENST00000557703 TRIM21P19474 475 aaKnown RBP14.7□□□□□ -0.06
SHMT2-234ENST00000557703 PCSK1P29120 753 aa14.7□□□□□ -0.06
SHMT2-234ENST00000557703 CA8P35219 290 aa14.7□□□□□ -0.06
SHMT2-234ENST00000557703 MXI1P50539 228 aa14.7□□□□□ -0.06
SHMT2-234ENST00000557703 CLCN4P51793 760 aa14.7□□□□□ -0.06
SHMT2-234ENST00000557703 GUCY2FP51841 1108 aa14.7□□□□□ -0.06
SHMT2-234ENST00000557703 STX17P56962 302 aa14.7□□□□□ -0.06
SHMT2-234ENST00000557703 TNNC1P63316 161 aa14.7□□□□□ -0.06
SHMT2-234ENST00000557703 C1orf220Q5T0J3 134 aa14.7□□□□□ -0.06
SHMT2-234ENST00000557703 TCERG1LQ5VWI1 586 aa14.7□□□□□ -0.06
SHMT2-234ENST00000557703 LMBRD2Q68DH5 695 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-234ENST00000557703 LILRA6Q6PI73 481 aa14.7□□□□□ -0.06
SHMT2-234ENST00000557703 ZNF461Q8TAF7 563 aa14.7□□□□□ -0.06
SHMT2-234ENST00000557703 C2orf15Q8WU43 125 aaKnown RBP14.7□□□□□ -0.06
SHMT2-234ENST00000557703 CLSTN3Q9BQT9 956 aa14.7□□□□□ -0.06
SHMT2-234ENST00000557703 ACBD6Q9BR61 282 aa14.7□□□□□ -0.06
SHMT2-234ENST00000557703 XYLT2Q9H1B5 865 aa14.7□□□□□ -0.06
SHMT2-234ENST00000557703 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.7□□□□□ -0.06
SHMT2-234ENST00000557703 HCFC2Q9Y5Z7 792 aa14.7□□□□□ -0.06
SHMT2-234ENST00000557703 VWA8A3KMH1 1905 aa14.69□□□□□ -0.06
SHMT2-234ENST00000557703 TULP1O00294 542 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-234ENST00000557703 C2CD2LO14523 706 aa14.69□□□□□ -0.06
SHMT2-234ENST00000557703 GABRDO14764 452 aa14.69□□□□□ -0.06
SHMT2-234ENST00000557703 PPEF2O14830 753 aa14.69□□□□□ -0.06
SHMT2-234ENST00000557703 ABLIM3O94929 683 aa14.69□□□□□ -0.06
SHMT2-234ENST00000557703 POU2F2P09086 479 aa14.69□□□□□ -0.06
SHMT2-234ENST00000557703 EEF1GP26641 437 aaKnown RBP14.69□□□□□ -0.06
SHMT2-234ENST00000557703 HOXA9P31269 272 aa14.69□□□□□ -0.06
SHMT2-234ENST00000557703 DLG4P78352 724 aa14.69□□□□□ -0.06
SHMT2-234ENST00000557703 MYL7Q01449 175 aa14.69□□□□□ -0.06
SHMT2-234ENST00000557703 ITIH3Q06033 890 aa14.69□□□□□ -0.06
SHMT2-234ENST00000557703 TYRO3Q06418 890 aa14.69□□□□□ -0.06
SHMT2-234ENST00000557703 PPP3CAQ08209 521 aa14.69□□□□□ -0.06
SHMT2-234ENST00000557703 SKIV2LQ15477 1246 aaKnown RBP14.69□□□□□ -0.06
SHMT2-234ENST00000557703 MAPRE1Q15691 268 aaKnown RBP14.69□□□□□ -0.06
SHMT2-234ENST00000557703 ZNF699Q32M78 642 aa14.69□□□□□ -0.06
SHMT2-234ENST00000557703 WDR72Q3MJ13 1102 aa14.69□□□□□ -0.06
SHMT2-234ENST00000557703 CTXN3Q4LDR2 81 aa14.69□□□□□ -0.06
SHMT2-234ENST00000557703 ZNF667Q5HYK9 610 aa14.69□□□□□ -0.06
SHMT2-234ENST00000557703 WDR44Q5JSH3 913 aa14.69□□□□□ -0.06
SHMT2-234ENST00000557703 CCDC149Q6ZUS6 474 aa14.69□□□□□ -0.06
SHMT2-234ENST00000557703 ADGRD2Q7Z7M1 963 aa14.69□□□□□ -0.06
SHMT2-234ENST00000557703 CMASQ8NFW8 434 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-234ENST00000557703 SLC22A17Q8WUG5 538 aa14.69□□□□□ -0.06
SHMT2-234ENST00000557703 ATXN2LQ8WWM7 1075 aaKnown RBP14.69□□□□□ -0.06
SHMT2-234ENST00000557703 FAM81BQ96LP2 452 aa14.69□□□□□ -0.06
SHMT2-234ENST00000557703 CYP3A43Q9HB55 503 aa14.69□□□□□ -0.06
SHMT2-234ENST00000557703 MAGEC2Q9UBF1 373 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-234ENST00000557703 SNX9Q9Y5X1 595 aa14.69□□□□□ -0.06
SHMT2-234ENST00000557703 COL6A3P12111 3177 aa14.68□□□□□ -0.06
SHMT2-234ENST00000557703 GTPBP10A4D1E9 387 aaKnown RBP14.68□□□□□ -0.06
SHMT2-234ENST00000557703 HLA-DRAP01903 254 aa14.68□□□□□ -0.06
SHMT2-234ENST00000557703 ATF2P15336 505 aa14.68□□□□□ -0.06
SHMT2-234ENST00000557703 OR1D2P34982 312 aa14.68□□□□□ -0.06
SHMT2-234ENST00000557703 GCLMP48507 274 aa14.68□□□□□ -0.06
SHMT2-234ENST00000557703 MYL6P60660 151 aa14.68□□□□□ -0.06
SHMT2-234ENST00000557703 MYL5Q02045 173 aa14.68□□□□□ -0.06
SHMT2-234ENST00000557703 GPR17Q13304 367 aa14.68□□□□□ -0.06
SHMT2-234ENST00000557703 CCDC85BQ15834 202 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-234ENST00000557703 DCAF17Q5H9S7 520 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-234ENST00000557703 RBM23Q86U06 439 aaKnown RBP14.68□□□□□ -0.06
SHMT2-234ENST00000557703 DCP1BQ8IZD4 617 aaKnown RBP14.68□□□□□ -0.06
SHMT2-234ENST00000557703 AUTS2Q8WXX7 1259 aa14.68□□□□□ -0.06
SHMT2-234ENST00000557703 EEF2KMTQ96G04 330 aa14.68□□□□□ -0.06
SHMT2-234ENST00000557703 UBE2ZQ9H832 354 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-234ENST00000557703 RAB20Q9NX57 234 aa14.68□□□□□ -0.06
SHMT2-234ENST00000557703 ZDHHC7Q9NXF8 308 aa14.68□□□□□ -0.06
SHMT2-234ENST00000557703 CLDND1Q9NY35 253 aa14.68□□□□□ -0.06
SHMT2-234ENST00000557703 AFF4Q9UHB7 1163 aaKnown RBP14.68□□□□□ -0.06
SHMT2-234ENST00000557703 FBXL5Q9UKA1 691 aa14.68□□□□□ -0.06
SHMT2-234ENST00000557703 SMTNL1A8MU46 457 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 I3L4J1 428 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 PER2O15055 1255 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 TGM5O43548 720 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 VNN1O95497 513 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 AFPP02771 609 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms