RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 CSRNP2Q9H175 543 aa8.8□□□□□ -1
RD3L-201ENST00000557640 HEBP1Q9NRV9 189 aa8.8□□□□□ -1
RD3L-201ENST00000557640 GJB4Q9NTQ9 266 aa8.8□□□□□ -1
RD3L-201ENST00000557640 C2orf42Q9NWW7 574 aa8.8□□□□□ -1
RD3L-201ENST00000557640 ZSCAN32Q9NX65 697 aa8.8□□□□□ -1
RD3L-201ENST00000557640 KANSL3Q9P2N6 904 aa8.8□□□□□ -1
RD3L-201ENST00000557640 DNMT3BQ9UBC3 853 aaKnown RBP8.8□□□□□ -1
RD3L-201ENST00000557640 STK39Q9UEW8 545 aa8.8□□□□□ -1
RD3L-201ENST00000557640 DDX25Q9UHL0 483 aaKnown RBP8.8□□□□□ -1
RD3L-201ENST00000557640 PCDHA4Q9UN74 947 aa8.8□□□□□ -1
RD3L-201ENST00000557640 USP20Q9Y2K6 914 aa8.8□□□□□ -1
RD3L-201ENST00000557640 SNX14Q9Y5W7 946 aa8.8□□□□□ -1
RD3L-201ENST00000557640 ERLIN2O94905 339 aa8.79□□□□□ -1
RD3L-201ENST00000557640 FAM157BP0CG42 384 aa8.79□□□□□ -1
RD3L-201ENST00000557640 GLRA2P23416 452 aa8.79□□□□□ -1
RD3L-201ENST00000557640 PDIA3P30101 505 aaKnown RBP8.79□□□□□ -1
RD3L-201ENST00000557640 YWHABP31946 246 aaKnown RBP8.79□□□□□ -1
RD3L-201ENST00000557640 CCR2P41597 374 aa8.79□□□□□ -1
RD3L-201ENST00000557640 QARSP47897 775 aaKnown RBP8.79□□□□□ -1
RD3L-201ENST00000557640 CDC42EP1Q00587 391 aa8.79□□□□□ -1
RD3L-201ENST00000557640 CYP4A11Q02928 519 aa8.79□□□□□ -1
RD3L-201ENST00000557640 PRKCQQ04759 706 aa8.79□□□□□ -1
RD3L-201ENST00000557640 SPEM2Q0P670 501 aa8.79□□□□□ -1
RD3L-201ENST00000557640 GRIK3Q13003 919 aa8.79□□□□□ -1
RD3L-201ENST00000557640 SRSF5Q13243 272 aaKnown RBP8.79□□□□□ -1
RD3L-201ENST00000557640 TOB2Q14106 344 aaPredicted RBP8.79□□□□□ -1
RD3L-201ENST00000557640 CTTNQ14247 550 aaKnown RBP8.79□□□□□ -1
RD3L-201ENST00000557640 HSP90AA2PQ14568 343 aaPredicted RBP8.79□□□□□ -1
RD3L-201ENST00000557640 PSMD5Q16401 504 aa8.79□□□□□ -1
RD3L-201ENST00000557640 NOTUMQ6P988 496 aa8.79□□□□□ -1
RD3L-201ENST00000557640 CD300LGQ6UXG3 332 aa8.79□□□□□ -1
RD3L-201ENST00000557640 DAGLBQ8NCG7 672 aa8.79□□□□□ -1
RD3L-201ENST00000557640 C3orf58Q8NDZ4 430 aa8.79□□□□□ -1
RD3L-201ENST00000557640 BICD2Q8TD16 824 aa8.79□□□□□ -1
RD3L-201ENST00000557640 SLC7A3Q8WY07 619 aa8.79□□□□□ -1
RD3L-201ENST00000557640 DYDC2Q96IM9 177 aa8.79□□□□□ -1
RD3L-201ENST00000557640 PCMTD1Q96MG8 357 aaPredicted RBP8.79□□□□□ -1
RD3L-201ENST00000557640 PHF20Q9BVI0 1012 aa8.79□□□□□ -1
RD3L-201ENST00000557640 BCO2Q9BYV7 579 aa8.79□□□□□ -1
RD3L-201ENST00000557640 USP18Q9UMW8 372 aa8.79□□□□□ -1
RD3L-201ENST00000557640 KCNJ14Q9UNX9 436 aa8.79□□□□□ -1
RD3L-201ENST00000557640 DENND4CQ5VZ89 1909 aa8.79□□□□□ -1
RD3L-201ENST00000557640 ATG2BQ96BY7 2078 aa8.79□□□□□ -1
RD3L-201ENST00000557640 SF3B1O75533 1304 aaKnown RBP eCLIP8.79□□□□□ -1
RD3L-201ENST00000557640 ZMYM2Q9UBW7 1377 aa8.78□□□□□ -1
RD3L-201ENST00000557640 A0A087WWV3 80 aa8.78□□□□□ -1
RD3L-201ENST00000557640 C9orf172C9J069 976 aa8.78□□□□□ -1
RD3L-201ENST00000557640 I3L4J1 428 aa8.78□□□□□ -1
RD3L-201ENST00000557640 INO80B-WBP1J3KQ70 363 aa8.78□□□□□ -1
RD3L-201ENST00000557640 HNRNPA1P09651 372 aaKnown RBP eCLIP8.78□□□□□ -1
RD3L-201ENST00000557640 RPS6KB1P23443 525 aa8.78□□□□□ -1
RD3L-201ENST00000557640 HOXA9P31269 272 aa8.78□□□□□ -1
RD3L-201ENST00000557640 NLRP5P59047 1200 aa8.78□□□□□ -1
RD3L-201ENST00000557640 LMNB2Q03252 620 aa8.78□□□□□ -1
RD3L-201ENST00000557640 GRM2Q14416 872 aa8.78□□□□□ -1
RD3L-201ENST00000557640 PPM1JQ5JR12 505 aa8.78□□□□□ -1
RD3L-201ENST00000557640 PPM1LQ5SGD2 360 aa8.78□□□□□ -1
RD3L-201ENST00000557640 NCAPH2Q6IBW4 605 aa8.78□□□□□ -1
RD3L-201ENST00000557640 TANGO2Q6ICL3 276 aa8.78□□□□□ -1
RD3L-201ENST00000557640 MOXD1Q6UVY6 613 aa8.78□□□□□ -1
RD3L-201ENST00000557640 GPR65Q8IYL9 337 aa8.78□□□□□ -1
RD3L-201ENST00000557640 BLIDQ8IZY5 108 aa8.78□□□□□ -1
RD3L-201ENST00000557640 TMEM130Q8N3G9 435 aa8.78□□□□□ -1
RD3L-201ENST00000557640 BSNDQ8WZ55 320 aa8.78□□□□□ -1
RD3L-201ENST00000557640 TCEAL4Q96EI5 215 aa8.78□□□□□ -1
RD3L-201ENST00000557640 CCDC51Q96ER9 411 aa8.78□□□□□ -1
RD3L-201ENST00000557640 OSBPL6Q9BZF3 934 aa8.78□□□□□ -1
RD3L-201ENST00000557640 GPRC5CQ9NQ84 441 aa8.78□□□□□ -1
RD3L-201ENST00000557640 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.78□□□□□ -1
RD3L-201ENST00000557640 POLIQ9UNA4 740 aa8.78□□□□□ -1
RD3L-201ENST00000557640 DOLKQ9UPQ8 538 aa8.78□□□□□ -1
RD3L-201ENST00000557640 SSX2IPQ9Y2D8 614 aa8.78□□□□□ -1
RD3L-201ENST00000557640 GIT1Q9Y2X7 761 aa8.78□□□□□ -1
RD3L-201ENST00000557640 ATRXP46100 2492 aa8.77□□□□□ -1.01
RD3L-201ENST00000557640 CCDC196A0A1B0GTZ2 297 aa8.77□□□□□ -1.01
RD3L-201ENST00000557640 RECQL4O94761 1208 aa8.77□□□□□ -1.01
RD3L-201ENST00000557640 C1RP00736 705 aa8.77□□□□□ -1.01
RD3L-201ENST00000557640 POU2F2P09086 479 aa8.77□□□□□ -1.01
RD3L-201ENST00000557640 ARL2P36404 184 aa8.77□□□□□ -1.01
RD3L-201ENST00000557640 RPS9P46781 194 aaKnown RBP8.77□□□□□ -1.01
RD3L-201ENST00000557640 EVCP57679 992 aa8.77□□□□□ -1.01
RD3L-201ENST00000557640 SATB1Q01826 763 aa8.77□□□□□ -1.01
RD3L-201ENST00000557640 PABPC1LQ4VXU2 614 aaKnown RBP8.77□□□□□ -1.01
RD3L-201ENST00000557640 XKR9Q5GH70 373 aa8.77□□□□□ -1.01
RD3L-201ENST00000557640 BMP2KLQ5H9B9 411 aa8.77□□□□□ -1.01
RD3L-201ENST00000557640 AXDND1Q5T1B0 1012 aaPredicted RBP8.77□□□□□ -1.01
RD3L-201ENST00000557640 LIN9Q5TKA1 542 aa8.77□□□□□ -1.01
RD3L-201ENST00000557640 FAM171A1Q5VUB5 890 aa8.77□□□□□ -1.01
RD3L-201ENST00000557640 EEF1DP3Q658K8 133 aa8.77□□□□□ -1.01
RD3L-201ENST00000557640 C8orf86Q6ZUL3 223 aa8.77□□□□□ -1.01
RD3L-201ENST00000557640 MTSS1LQ765P7 747 aa8.77□□□□□ -1.01
RD3L-201ENST00000557640 CEP57Q86XR8 500 aa8.77□□□□□ -1.01
RD3L-201ENST00000557640 C4orf19Q8IY42 314 aa8.77□□□□□ -1.01
RD3L-201ENST00000557640 CNNM3Q8NE01 707 aa8.77□□□□□ -1.01
RD3L-201ENST00000557640 ATRIPQ8WXE1 791 aa8.77□□□□□ -1.01
RD3L-201ENST00000557640 MCRS1Q96EZ8 462 aa8.77□□□□□ -1.01
RD3L-201ENST00000557640 SHDQ96IW2 340 aa8.77□□□□□ -1.01
RD3L-201ENST00000557640 JPH2Q9BR39 696 aaPredicted RBP8.77□□□□□ -1.01
RD3L-201ENST00000557640 RTKNQ9BST9 563 aa8.77□□□□□ -1.01
RD3L-201ENST00000557640 TTPALQ9BTX7 342 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms