RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 WEE2P0C1S8 567 aa18.77■□□□□ 0.6
XRCC3-218ENST00000557439 KLRC2P26717 231 aa18.77■□□□□ 0.6
XRCC3-218ENST00000557439 RTP1P59025 263 aa18.77■□□□□ 0.6
XRCC3-218ENST00000557439 XRCC4Q13426 336 aa18.77■□□□□ 0.6
XRCC3-218ENST00000557439 DEFB132Q7Z7B7 95 aa18.77■□□□□ 0.6
XRCC3-218ENST00000557439 FEZF2Q8TBJ5 459 aa18.77■□□□□ 0.6
XRCC3-218ENST00000557439 ZBTB10Q96DT7 871 aa18.77■□□□□ 0.6
XRCC3-218ENST00000557439 TRIM11Q96F44 468 aa18.77■□□□□ 0.6
XRCC3-218ENST00000557439 SAYSD1Q9NPB0 183 aa18.77■□□□□ 0.6
XRCC3-218ENST00000557439 PNMA3Q9UL41 463 aa18.77■□□□□ 0.6
XRCC3-218ENST00000557439 ZNF148Q9UQR1 794 aa18.77■□□□□ 0.6
XRCC3-218ENST00000557439 PHIPQ8WWQ0 1821 aa18.77■□□□□ 0.59
XRCC3-218ENST00000557439 A0A0B4J269 797 aa18.77■□□□□ 0.59
XRCC3-218ENST00000557439 GOLGA8SH3BPF8 625 aa18.77■□□□□ 0.59
XRCC3-218ENST00000557439 GOLGA8MH3BSY2 632 aa18.77■□□□□ 0.59
XRCC3-218ENST00000557439 MAFGO15525 162 aa18.77■□□□□ 0.59
XRCC3-218ENST00000557439 PSTPIP1O43586 416 aa18.77■□□□□ 0.59
XRCC3-218ENST00000557439 KRT1P04264 644 aa18.77■□□□□ 0.59
XRCC3-218ENST00000557439 RXRBP28702 533 aa18.77■□□□□ 0.59
XRCC3-218ENST00000557439 MYL6P60660 151 aa18.77■□□□□ 0.59
XRCC3-218ENST00000557439 CAPSQ13938 189 aa18.77■□□□□ 0.59
XRCC3-218ENST00000557439 ITIH4Q14624 930 aa18.77■□□□□ 0.59
XRCC3-218ENST00000557439 FAM47EQ6ZV65 393 aa18.77■□□□□ 0.59
XRCC3-218ENST00000557439 CROCCP2Q86T23 111 aa18.77■□□□□ 0.59
XRCC3-218ENST00000557439 KATNAL2Q8IYT4 538 aa18.77■□□□□ 0.59
XRCC3-218ENST00000557439 TCHPQ9BT92 498 aa18.77■□□□□ 0.59
XRCC3-218ENST00000557439 R3HDMLQ9H3Y0 253 aa18.77■□□□□ 0.59
XRCC3-218ENST00000557439 DHX33Q9H6R0 707 aaKnown RBP18.77■□□□□ 0.59
XRCC3-218ENST00000557439 ACAD9Q9H845 621 aa18.77■□□□□ 0.59
XRCC3-218ENST00000557439 STYXL1Q9Y6J8 313 aa18.77■□□□□ 0.59
XRCC3-218ENST00000557439 POC1B-GALNT4F8VUJ3 575 aa18.76■□□□□ 0.59
XRCC3-218ENST00000557439 NFKBIEO00221 500 aa18.76■□□□□ 0.59
XRCC3-218ENST00000557439 MARK3P27448 753 aa18.76■□□□□ 0.59
XRCC3-218ENST00000557439 OSTNP61366 133 aa18.76■□□□□ 0.59
XRCC3-218ENST00000557439 ELF3P78545 371 aaPredicted RBP18.76■□□□□ 0.59
XRCC3-218ENST00000557439 GAD2Q05329 585 aa18.76■□□□□ 0.59
XRCC3-218ENST00000557439 ORC1Q13415 861 aa18.76■□□□□ 0.59
XRCC3-218ENST00000557439 CGB2Q6NT52 195 aa18.76■□□□□ 0.59
XRCC3-218ENST00000557439 XRRA1Q6P2D8 792 aa18.76■□□□□ 0.59
XRCC3-218ENST00000557439 PNMA8AQ86V59 439 aaPredicted RBP18.76■□□□□ 0.59
XRCC3-218ENST00000557439 MAIP1Q8WWC4 291 aa18.76■□□□□ 0.59
XRCC3-218ENST00000557439 SPOCK2Q92563 424 aa18.76■□□□□ 0.59
XRCC3-218ENST00000557439 CGRRF1Q99675 332 aa18.76■□□□□ 0.59
XRCC3-218ENST00000557439 TEX13BQ9BXU2 312 aa18.76■□□□□ 0.59
XRCC3-218ENST00000557439 SLC12A4Q9UP95 1085 aa18.76■□□□□ 0.59
XRCC3-218ENST00000557439 GHRP10912 638 aa18.76■□□□□ 0.59
XRCC3-218ENST00000557439 MAGEA4P43358 317 aa18.76■□□□□ 0.59
XRCC3-218ENST00000557439 ZNF280AP59817 542 aaPredicted RBP18.76■□□□□ 0.59
XRCC3-218ENST00000557439 DYNLT1P63172 113 aa18.76■□□□□ 0.59
XRCC3-218ENST00000557439 KCNJ2P63252 427 aa18.76■□□□□ 0.59
XRCC3-218ENST00000557439 SNCBQ16143 134 aa18.76■□□□□ 0.59
XRCC3-218ENST00000557439 SWT1Q5T5J6 900 aaKnown RBP18.76■□□□□ 0.59
XRCC3-218ENST00000557439 ZNF772Q68DY9 489 aaPredicted RBP18.76■□□□□ 0.59
XRCC3-218ENST00000557439 PHF13Q86YI8 300 aaPredicted RBP18.76■□□□□ 0.59
XRCC3-218ENST00000557439 KIF2BQ8N4N8 673 aa18.76■□□□□ 0.59
XRCC3-218ENST00000557439 SLC7A3Q8WY07 619 aa18.76■□□□□ 0.59
XRCC3-218ENST00000557439 SLITRK1Q96PX8 696 aa18.76■□□□□ 0.59
XRCC3-218ENST00000557439 TGS1Q96RS0 853 aaKnown RBP18.76■□□□□ 0.59
XRCC3-218ENST00000557439 PCYT2Q99447 389 aa18.76■□□□□ 0.59
XRCC3-218ENST00000557439 KIAA1586Q9HCI6 787 aa18.76■□□□□ 0.59
XRCC3-218ENST00000557439 MRPL47Q9HD33 250 aaKnown RBP18.76■□□□□ 0.59
XRCC3-218ENST00000557439 TRIM33Q9UPN9 1127 aa18.76■□□□□ 0.59
XRCC3-218ENST00000557439 NFASCO94856 1347 aa18.75■□□□□ 0.59
XRCC3-218ENST00000557439 LCTP09848 1927 aa18.75■□□□□ 0.59
XRCC3-218ENST00000557439 DKC1O60832 514 aaKnown RBP eCLIP18.75■□□□□ 0.59
XRCC3-218ENST00000557439 DNAJC8O75937 253 aaPredicted RBP18.75■□□□□ 0.59
XRCC3-218ENST00000557439 IFNB1P01574 187 aa18.75■□□□□ 0.59
XRCC3-218ENST00000557439 FOXN2P32314 431 aa18.75■□□□□ 0.59
XRCC3-218ENST00000557439 STX2P32856 288 aa18.75■□□□□ 0.59
XRCC3-218ENST00000557439 ARL2P36404 184 aa18.75■□□□□ 0.59
XRCC3-218ENST00000557439 ARSEP51690 589 aa18.75■□□□□ 0.59
XRCC3-218ENST00000557439 SMTNL2Q2TAL5 461 aa18.75■□□□□ 0.59
XRCC3-218ENST00000557439 GNPTABQ3T906 1256 aa18.75■□□□□ 0.59
XRCC3-218ENST00000557439 CCDC89Q8N998 374 aa18.75■□□□□ 0.59
XRCC3-218ENST00000557439 EXD1Q8NHP7 514 aa18.75■□□□□ 0.59
XRCC3-218ENST00000557439 RMDN2Q96LZ7 410 aa18.75■□□□□ 0.59
XRCC3-218ENST00000557439 BAIAP2L1Q9UHR4 511 aa18.75■□□□□ 0.59
XRCC3-218ENST00000557439 USP15Q9Y4E8 981 aaPredicted RBP18.75■□□□□ 0.59
XRCC3-218ENST00000557439 MAFBQ9Y5Q3 323 aaPredicted RBP18.75■□□□□ 0.59
XRCC3-218ENST00000557439 SPDYE16A6NNV3 312 aaPredicted RBP18.75■□□□□ 0.59
XRCC3-218ENST00000557439 LIASO43766 372 aa18.75■□□□□ 0.59
XRCC3-218ENST00000557439 OAS1P00973 400 aaKnown RBP18.75■□□□□ 0.59
XRCC3-218ENST00000557439 SRGAP2CP0DJJ0 459 aa18.75■□□□□ 0.59
XRCC3-218ENST00000557439 MAN1A1P33908 653 aa18.75■□□□□ 0.59
XRCC3-218ENST00000557439 HIRAP54198 1017 aaPredicted RBP18.75■□□□□ 0.59
XRCC3-218ENST00000557439 GPS1Q13098 491 aa18.75■□□□□ 0.59
XRCC3-218ENST00000557439 ANGEL2Q5VTE6 544 aaKnown RBP18.75■□□□□ 0.59
XRCC3-218ENST00000557439 TRIM50Q86XT4 487 aa18.75■□□□□ 0.59
XRCC3-218ENST00000557439 CCDC63Q8NA47 563 aa18.75■□□□□ 0.59
XRCC3-218ENST00000557439 CKAP2Q8WWK9 683 aa18.75■□□□□ 0.59
XRCC3-218ENST00000557439 TFAP2BQ92481 460 aa18.75■□□□□ 0.59
XRCC3-218ENST00000557439 TBC1D31Q96DN5 1066 aa18.75■□□□□ 0.59
XRCC3-218ENST00000557439 TMEM121Q9BTD3 319 aa18.75■□□□□ 0.59
XRCC3-218ENST00000557439 NSRP1Q9H0G5 558 aaKnown RBP18.75■□□□□ 0.59
XRCC3-218ENST00000557439 RASA4BC9J798 803 aa18.74■□□□□ 0.59
XRCC3-218ENST00000557439 CHUKO15111 745 aa18.74■□□□□ 0.59
XRCC3-218ENST00000557439 RASA4O43374 803 aa18.74■□□□□ 0.59
XRCC3-218ENST00000557439 GJB1P08034 283 aa18.74■□□□□ 0.59
XRCC3-218ENST00000557439 PECAM1P16284 738 aaPredicted RBP18.74■□□□□ 0.59
XRCC3-218ENST00000557439 MMP8P22894 467 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms