RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 WDR49Q8IV35 697 aa14.89□□□□□ -0.03
VPS33B-206ENST00000557358 GOLPH3LQ9H4A5 285 aa14.89□□□□□ -0.03
VPS33B-206ENST00000557358 MUTYHQ9UIF7 546 aa14.89□□□□□ -0.03
VPS33B-206ENST00000557358 TIMM13Q9Y5L4 95 aaPredicted RBP14.89□□□□□ -0.03
VPS33B-206ENST00000557358 C2orf16Q68DN1 1984 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 WDR27A2RRH5 827 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 PDXKO00764 312 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 TGFB1I1O43294 461 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 PHACTR2O75167 634 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 ABLIM3O94929 683 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 FSHRP23945 695 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 AP3M2P53677 418 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 TSPY1Q01534 308 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 ADCY1Q08828 1119 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 SMARCB1Q12824 385 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 DPYDQ12882 1025 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 BFSP1Q12934 665 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 TRPC3Q13507 836 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 MTMR3Q13615 1198 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 TCEAL8Q8IYN2 117 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 DCP1BQ8IZD4 617 aaKnown RBP14.88□□□□□ -0.03
VPS33B-206ENST00000557358 TMEM86AQ8N2M4 240 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 CCDC127Q96BQ5 260 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 ZNF707Q96C28 371 aaPredicted RBP14.88□□□□□ -0.03
VPS33B-206ENST00000557358 ZNF512Q96ME7 567 aaPredicted RBP14.88□□□□□ -0.03
VPS33B-206ENST00000557358 TIGD1Q96MW7 591 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 MTMR12Q9C0I1 747 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 EPHX3Q9H6B9 360 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 INTS13Q9NVM9 706 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 CDH22Q9UJ99 828 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 SCN1AP35498 2009 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 MYO10Q9HD67 2058 aa14.88□□□□□ -0.03
VPS33B-206ENST00000557358 C5orf42Q9H799 3197 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 ZNF197O14709 1029 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 PPEF2O14830 753 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 TBC1D4O60343 1298 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 PAPLNO95428 1278 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 CYP11A1P05108 521 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 HOXD13P35453 343 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 ALDH1A3P47895 512 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 MYL7Q01449 175 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 CYP24A1Q07973 514 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 PSMD6Q15008 389 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 PTPN21Q16825 1174 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 PABPC1LQ4VXU2 614 aaKnown RBP14.87□□□□□ -0.03
VPS33B-206ENST00000557358 CYP4A22Q5TCH4 519 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 RSPO2Q6UXX9 243 aaPredicted RBP14.87□□□□□ -0.03
VPS33B-206ENST00000557358 GET4Q7L5D6 327 aaPredicted RBP14.87□□□□□ -0.03
VPS33B-206ENST00000557358 GRASPQ7Z6J2 395 aaPredicted RBP14.87□□□□□ -0.03
VPS33B-206ENST00000557358 UBALD2Q8IYN6 164 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 C1orf127Q8N9H9 656 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 LEMD2Q8NC56 503 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 KIAA0895Q8NCT3 520 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 ZSWIM2Q8NEG5 633 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 SPATA18Q8TC71 538 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 SMARCE1Q969G3 411 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 NXPE3Q969Y0 559 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 GSDMAQ96QA5 445 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 IGSF9Q9P2J2 1179 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 LIMD1Q9UGP4 676 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 SORCS3Q9UPU3 1222 aa14.87□□□□□ -0.03
VPS33B-206ENST00000557358 GPR37L1O60883 481 aa14.86□□□□□ -0.03
VPS33B-206ENST00000557358 NR3C1P04150 777 aa14.86□□□□□ -0.03
VPS33B-206ENST00000557358 PRR29P0C7W0 189 aa14.86□□□□□ -0.03
VPS33B-206ENST00000557358 PTPN2P17706 415 aa14.86□□□□□ -0.03
VPS33B-206ENST00000557358 EPHB3P54753 998 aa14.86□□□□□ -0.03
VPS33B-206ENST00000557358 GPR17Q13304 367 aa14.86□□□□□ -0.03
VPS33B-206ENST00000557358 STIM1Q13586 685 aa14.86□□□□□ -0.03
VPS33B-206ENST00000557358 CEP135Q66GS9 1140 aa14.86□□□□□ -0.03
VPS33B-206ENST00000557358 SLC9A9Q8IVB4 645 aa14.86□□□□□ -0.03
VPS33B-206ENST00000557358 FMR1NBQ8N0W7 255 aaPredicted RBP14.86□□□□□ -0.03
VPS33B-206ENST00000557358 GUF1Q8N442 669 aaKnown RBP14.86□□□□□ -0.03
VPS33B-206ENST00000557358 C2orf15Q8WU43 125 aaKnown RBP14.86□□□□□ -0.03
VPS33B-206ENST00000557358 EDAQ92838 391 aa14.86□□□□□ -0.03
VPS33B-206ENST00000557358 HPDLQ96IR7 371 aa14.86□□□□□ -0.03
VPS33B-206ENST00000557358 CGRRF1Q99675 332 aa14.86□□□□□ -0.03
VPS33B-206ENST00000557358 TSG101Q99816 390 aa14.86□□□□□ -0.03
VPS33B-206ENST00000557358 MRPS23Q9Y3D9 190 aaKnown RBP14.86□□□□□ -0.03
VPS33B-206ENST00000557358 INSL5Q9Y5Q6 135 aa14.86□□□□□ -0.03
VPS33B-206ENST00000557358 SNX9Q9Y5X1 595 aa14.86□□□□□ -0.03
VPS33B-206ENST00000557358 SPTLC1O15269 473 aa14.85□□□□□ -0.03
VPS33B-206ENST00000557358 KRT13P13646 458 aa14.85□□□□□ -0.03
VPS33B-206ENST00000557358 PCSK1P29120 753 aa14.85□□□□□ -0.03
VPS33B-206ENST00000557358 LHX1P48742 406 aa14.85□□□□□ -0.03
VPS33B-206ENST00000557358 TUFMP49411 452 aaKnown RBP14.85□□□□□ -0.03
VPS33B-206ENST00000557358 ZXDAP98168 799 aa14.85□□□□□ -0.03
VPS33B-206ENST00000557358 BIRC3Q13489 604 aa14.85□□□□□ -0.03
VPS33B-206ENST00000557358 VEPH1Q14D04 833 aa14.85□□□□□ -0.03
VPS33B-206ENST00000557358 TAF12Q16514 161 aa14.85□□□□□ -0.03
VPS33B-206ENST00000557358 WSCD1Q658N2 575 aa14.85□□□□□ -0.03
VPS33B-206ENST00000557358 LMBRD2Q68DH5 695 aaPredicted RBP14.85□□□□□ -0.03
VPS33B-206ENST00000557358 RNF19BQ6ZMZ0 732 aa14.85□□□□□ -0.03
VPS33B-206ENST00000557358 PDZD4Q76G19 769 aaPredicted RBP14.85□□□□□ -0.03
VPS33B-206ENST00000557358 DPH6Q7L8W6 267 aa14.85□□□□□ -0.03
VPS33B-206ENST00000557358 ITIH5Q86UX2 942 aa14.85□□□□□ -0.03
VPS33B-206ENST00000557358 TOP6BLQ8N6T0 577 aa14.85□□□□□ -0.03
VPS33B-206ENST00000557358 PGLYRP2Q96PD5 576 aa14.85□□□□□ -0.03
VPS33B-206ENST00000557358 GDAP2Q9NXN4 497 aa14.85□□□□□ -0.03
VPS33B-206ENST00000557358 HSFX1Q9UBD0 423 aa14.85□□□□□ -0.03
VPS33B-206ENST00000557358 DENND4AQ7Z401 1863 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms