RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 IFNB1P01574 187 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 TPBGLP0DKB5 382 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 MYBL1P10243 752 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 CALB2P22676 271 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 CAP2P40123 477 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 PLCB3Q01970 1234 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 SP4Q02446 784 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 GAD2Q05329 585 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 EFTUD2Q15029 972 aaKnown RBP eCLIP12.04□□□□□ -0.487e-8■□□□□ 11.2
SRP54-213ENST00000556994 PDK4Q16654 411 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 PARP6Q2NL67 630 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 BRDTQ58F21 947 aaPredicted RBP12.04□□□□□ -0.48
SRP54-213ENST00000556994 LIN9Q5TKA1 542 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 HHATQ5VTY9 493 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 TXNRD3NBQ6F5E7 133 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 LVRNQ6Q4G3 990 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 OTOAQ7RTW8 1153 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 OGFOD1Q8N543 542 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 SUPT20HQ8NEM7 779 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 C10orf82Q8WW14 230 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 FBXL18Q96ME1 805 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 NUDCD1Q96RS6 583 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 RAVER2Q9HCJ3 691 aaKnown RBP12.04□□□□□ -0.48
SRP54-213ENST00000556994 ALG13Q9NP73 1137 aaKnown RBP12.04□□□□□ -0.48
SRP54-213ENST00000556994 TELO2Q9Y4R8 837 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 PCDHB4Q9Y5E5 795 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 GOLGA8RI6L899 631 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 PRPF4O43172 522 aaKnown RBP eCLIP12.04□□□□□ -0.48
SRP54-213ENST00000556994 LYPLA2O95372 231 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 HLA-DRAP01903 254 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 PDHA1P08559 390 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 ABHD2P08910 425 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 KRT4P19013 534 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 ACOT2P49753 483 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 PTP4A2Q12974 167 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 PDIA2Q13087 525 aaKnown RBP12.04□□□□□ -0.48
SRP54-213ENST00000556994 PLEKHG4Q58EX7 1191 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 WDR44Q5JSH3 913 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 MTDHQ86UE4 582 aaKnown RBP12.04□□□□□ -0.48
SRP54-213ENST00000556994 FAM160B2Q86V87 743 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 AGGF1Q8N302 714 aaeCLIP12.04□□□□□ -0.48
SRP54-213ENST00000556994 RIBC1Q8N443 379 aaPredicted RBP12.04□□□□□ -0.48
SRP54-213ENST00000556994 EXD1Q8NHP7 514 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 ZNF75CPQ92670 426 aaPredicted RBP12.04□□□□□ -0.48
SRP54-213ENST00000556994 CEP170P1Q96L14 293 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 KLF6Q99612 283 aaPredicted RBP12.04□□□□□ -0.48
SRP54-213ENST00000556994 TMEM121Q9BTD3 319 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 UBN1Q9NPG3 1134 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 CYP39A1Q9NYL5 469 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 SAE1Q9UBE0 346 aaPredicted RBP12.04□□□□□ -0.48
SRP54-213ENST00000556994 FEM1BQ9UK73 627 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 PTPRJQ12913 1337 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 DCTN3O75935 186 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 ATP5HO75947 161 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 WFS1O76024 890 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 ICAM1P05362 532 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 POTEJP0CG39 1038 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 GNA15P30679 374 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 ALDH3A1P30838 453 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 GTF2H1P32780 548 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 PIK3CAP42336 1068 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 CCNG1P51959 295 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 NOMO3P69849 1222 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 BLMHQ13867 455 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 MAPK6Q16659 721 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 FAM182AQ5T1J6 154 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 TDRD10Q5VZ19 366 aaKnown RBP12.03□□□□□ -0.48
SRP54-213ENST00000556994 NLRX1Q86UT6 975 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 CCDC125Q86Z20 511 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 SEPT12Q8IYM1 358 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 SYTL5Q8TDW5 730 aaPredicted RBP12.03□□□□□ -0.48
SRP54-213ENST00000556994 STK32AQ8WU08 396 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 TRIM11Q96F44 468 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 OSBPL1AQ9BXW6 950 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 YIPF3Q9GZM5 350 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 TMEM39BQ9GZU3 492 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 DENND2DQ9H6A0 471 aaPredicted RBP12.03□□□□□ -0.48
SRP54-213ENST00000556994 APOBEC3GQ9HC16 384 aaKnown RBP12.03□□□□□ -0.48
SRP54-213ENST00000556994 TBC1D22BQ9NU19 505 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 IVNS1ABPQ9Y6Y0 642 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 ENO4A6NNW6 628 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 F8VP50 259 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 TYROBPO43914 113 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 MYCNP04198 464 aaPredicted RBP12.03□□□□□ -0.48
SRP54-213ENST00000556994 KRT1P04264 644 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 MMP10P09238 476 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 SSTR1P30872 391 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 SESN3P58005 492 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 MCCD1P59942 119 aaPredicted RBP12.03□□□□□ -0.48
SRP54-213ENST00000556994 WDR72Q3MJ13 1102 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 ENOSF1Q7L5Y1 443 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 NLRP9Q7RTR0 991 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 TAS1R3Q7RTX0 852 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 USP37Q86T82 979 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 GJD4Q96KN9 370 aaPredicted RBP12.03□□□□□ -0.48
SRP54-213ENST00000556994 SLITRK1Q96PX8 696 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 FNBP1Q96RU3 617 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 MRPL47Q9HD33 250 aaKnown RBP12.03□□□□□ -0.48
SRP54-213ENST00000556994 ZFP69BQ9UJL9 534 aa12.03□□□□□ -0.48
SRP54-213ENST00000556994 SYNPO2Q9UMS6 1093 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms