RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 NAB2Q15742 525 aa25.4■■□□□ 1.66
SIX4-203ENST00000556952 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.4■■□□□ 1.66
SIX4-203ENST00000556952 ZNF571Q7Z3V5 609 aaPredicted RBP25.4■■□□□ 1.66
SIX4-203ENST00000556952 TMEM130Q8N3G9 435 aa25.4■■□□□ 1.66
SIX4-203ENST00000556952 DESI2Q9BSY9 194 aa25.4■■□□□ 1.66
SIX4-203ENST00000556952 CYP3A43Q9HB55 503 aa25.4■■□□□ 1.66
SIX4-203ENST00000556952 RNF216Q9NWF9 866 aaPredicted RBP25.4■■□□□ 1.66
SIX4-203ENST00000556952 NXF1Q9UBU9 619 aaKnown RBP25.4■■□□□ 1.66
SIX4-203ENST00000556952 SLC4A7Q9Y6M7 1214 aa25.4■■□□□ 1.66
SIX4-203ENST00000556952 CLCN1P35523 988 aa25.39■■□□□ 1.66
SIX4-203ENST00000556952 SCNN1GP51170 649 aa25.39■■□□□ 1.66
SIX4-203ENST00000556952 BPIFB4P59827 614 aa25.39■■□□□ 1.66
SIX4-203ENST00000556952 TNNC1P63316 161 aa25.39■■□□□ 1.66
SIX4-203ENST00000556952 BMS1Q14692 1282 aaKnown RBP25.39■■□□□ 1.66
SIX4-203ENST00000556952 SPA17Q15506 151 aa25.39■■□□□ 1.66
SIX4-203ENST00000556952 SLC18A3Q16572 532 aa25.39■■□□□ 1.66
SIX4-203ENST00000556952 GLB1LQ6UWU2 654 aa25.39■■□□□ 1.66
SIX4-203ENST00000556952 TMCO2Q7Z6W1 182 aaPredicted RBP25.39■■□□□ 1.66
SIX4-203ENST00000556952 RNF19AQ9NV58 838 aa25.39■■□□□ 1.66
SIX4-203ENST00000556952 PCDHB4Q9Y5E5 795 aa25.39■■□□□ 1.66
SIX4-203ENST00000556952 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.39■■□□□ 1.65
SIX4-203ENST00000556952 ENPP3O14638 875 aa25.39■■□□□ 1.65
SIX4-203ENST00000556952 CYP26A1O43174 497 aa25.39■■□□□ 1.65
SIX4-203ENST00000556952 PDE6CP51160 858 aa25.39■■□□□ 1.65
SIX4-203ENST00000556952 C17orf53Q8N3J3 647 aaPredicted RBP25.39■■□□□ 1.65
SIX4-203ENST00000556952 TTC39CQ8N584 583 aa25.39■■□□□ 1.65
SIX4-203ENST00000556952 ACRBPQ8NEB7 543 aa25.39■■□□□ 1.65
SIX4-203ENST00000556952 EPS8L1Q8TE68 723 aa25.39■■□□□ 1.65
SIX4-203ENST00000556952 SYT11Q9BT88 431 aa25.39■■□□□ 1.65
SIX4-203ENST00000556952 CISHQ9NSE2 258 aa25.39■■□□□ 1.65
SIX4-203ENST00000556952 SPTLC3Q9NUV7 552 aa25.39■■□□□ 1.65
SIX4-203ENST00000556952 POLIQ9UNA4 740 aa25.39■■□□□ 1.65
SIX4-203ENST00000556952 GOLGA6L9A6NEM1 432 aa25.38■■□□□ 1.65
SIX4-203ENST00000556952 SV2CQ496J9 727 aa25.38■■□□□ 1.65
SIX4-203ENST00000556952 SCARA5Q6ZMJ2 495 aa25.38■■□□□ 1.65
SIX4-203ENST00000556952 MIOSQ9NXC5 875 aa25.38■■□□□ 1.65
SIX4-203ENST00000556952 TTC3P53804 2025 aa25.37■■□□□ 1.65
SIX4-203ENST00000556952 PPEF2O14830 753 aa25.37■■□□□ 1.65
SIX4-203ENST00000556952 CYP11B1P15538 503 aa25.37■■□□□ 1.65
SIX4-203ENST00000556952 IBSPP21815 317 aaPredicted RBP25.37■■□□□ 1.65
SIX4-203ENST00000556952 TAF6P49848 677 aa25.37■■□□□ 1.65
SIX4-203ENST00000556952 ZNF132P52740 706 aa25.37■■□□□ 1.65
SIX4-203ENST00000556952 TMEM270Q6UE05 265 aa25.37■■□□□ 1.65
SIX4-203ENST00000556952 RBBP8NLQ8NC74 664 aaPredicted RBP25.37■■□□□ 1.65
SIX4-203ENST00000556952 PPP1R13BQ96KQ4 1090 aa25.37■■□□□ 1.65
SIX4-203ENST00000556952 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.37■■□□□ 1.65
SIX4-203ENST00000556952 GOLGA2P5Q9HBQ8 144 aa25.37■■□□□ 1.65
SIX4-203ENST00000556952 LUC7LQ9NQ29 371 aaKnown RBP25.37■■□□□ 1.65
SIX4-203ENST00000556952 ADAMTS1Q9UHI8 967 aa25.37■■□□□ 1.65
SIX4-203ENST00000556952 NOCTQ9UK39 431 aaKnown RBP25.37■■□□□ 1.65
SIX4-203ENST00000556952 EFCAB14O75071 495 aa25.36■■□□□ 1.65
SIX4-203ENST00000556952 ATP2A2P16615 1042 aaKnown RBP25.36■■□□□ 1.65
SIX4-203ENST00000556952 RPL9P32969 192 aaKnown RBP25.36■■□□□ 1.65
SIX4-203ENST00000556952 AFF1P51825 1210 aaKnown RBP25.36■■□□□ 1.65
SIX4-203ENST00000556952 GFPT1Q06210 699 aaPredicted RBP25.36■■□□□ 1.65
SIX4-203ENST00000556952 SLC47A2Q86VL8 602 aa25.36■■□□□ 1.65
SIX4-203ENST00000556952 ZNF677Q86XU0 584 aa25.36■■□□□ 1.65
SIX4-203ENST00000556952 URGCPQ8TCY9 931 aa25.36■■□□□ 1.65
SIX4-203ENST00000556952 RSPH1Q8WYR4 309 aa25.36■■□□□ 1.65
SIX4-203ENST00000556952 LRCH3Q96II8 777 aa25.36■■□□□ 1.65
SIX4-203ENST00000556952 AGPAT1Q99943 283 aa25.36■■□□□ 1.65
SIX4-203ENST00000556952 TRMT1Q9NXH9 659 aaKnown RBP25.36■■□□□ 1.65
SIX4-203ENST00000556952 REXO2Q9Y3B8 237 aaKnown RBP25.36■■□□□ 1.65
SIX4-203ENST00000556952 CHD9Q3L8U1 2897 aa25.36■■□□□ 1.65
SIX4-203ENST00000556952 USP27XA6NNY8 438 aa25.35■■□□□ 1.65
SIX4-203ENST00000556952 WEE2P0C1S8 567 aa25.35■■□□□ 1.65
SIX4-203ENST00000556952 TXLNBQ8N3L3 684 aa25.35■■□□□ 1.65
SIX4-203ENST00000556952 UROC1Q96N76 676 aa25.35■■□□□ 1.65
SIX4-203ENST00000556952 SLC9A7Q96T83 725 aa25.35■■□□□ 1.65
SIX4-203ENST00000556952 SMYD3Q9H7B4 428 aa25.35■■□□□ 1.65
SIX4-203ENST00000556952 GDAP2Q9NXN4 497 aa25.35■■□□□ 1.65
SIX4-203ENST00000556952 KANSL3Q9P2N6 904 aa25.35■■□□□ 1.65
SIX4-203ENST00000556952 INPP5FQ9Y2H2 1132 aa25.35■■□□□ 1.65
SIX4-203ENST00000556952 PCDHB7Q9Y5E2 793 aa25.35■■□□□ 1.65
SIX4-203ENST00000556952 A0A087X0T9 212 aa25.35■■□□□ 1.65
SIX4-203ENST00000556952 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.35■■□□□ 1.65
SIX4-203ENST00000556952 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.35■■□□□ 1.65
SIX4-203ENST00000556952 ZNF263O14978 683 aa25.35■■□□□ 1.65
SIX4-203ENST00000556952 HOXA2O43364 376 aa25.35■■□□□ 1.65
SIX4-203ENST00000556952 POMCP01189 267 aa25.35■■□□□ 1.65
SIX4-203ENST00000556952 FAM228BP0C875 321 aa25.35■■□□□ 1.65
SIX4-203ENST00000556952 CD58P19256 250 aa25.35■■□□□ 1.65
SIX4-203ENST00000556952 RABGGTBP53611 331 aa25.35■■□□□ 1.65
SIX4-203ENST00000556952 TUSC3Q13454 348 aa25.35■■□□□ 1.65
SIX4-203ENST00000556952 CLLU1OSQ5K130 101 aa25.35■■□□□ 1.65
SIX4-203ENST00000556952 C10orf76Q5T2E6 689 aa25.35■■□□□ 1.65
SIX4-203ENST00000556952 NOP9Q86U38 636 aaKnown RBP25.35■■□□□ 1.65
SIX4-203ENST00000556952 REXO1L1PQ8IX06 675 aa25.35■■□□□ 1.65
SIX4-203ENST00000556952 DDX27Q96GQ7 796 aaKnown RBP25.35■■□□□ 1.65
SIX4-203ENST00000556952 SNX9Q9Y5X1 595 aa25.35■■□□□ 1.65
SIX4-203ENST00000556952 ATP8B3O60423 1300 aa25.34■■□□□ 1.65
SIX4-203ENST00000556952 KPNA7A9QM74 516 aa25.34■■□□□ 1.65
SIX4-203ENST00000556952 TNFAIP3P21580 790 aa25.34■■□□□ 1.65
SIX4-203ENST00000556952 PBX2P40425 430 aa25.34■■□□□ 1.65
SIX4-203ENST00000556952 CDR2Q01850 454 aa25.34■■□□□ 1.65
SIX4-203ENST00000556952 INCA1Q0VD86 236 aa25.34■■□□□ 1.65
SIX4-203ENST00000556952 NOMO2Q5JPE7 1267 aa25.34■■□□□ 1.65
SIX4-203ENST00000556952 SLC30A5Q8TAD4 765 aa25.34■■□□□ 1.65
SIX4-203ENST00000556952 OLIG1Q8TAK6 271 aa25.34■■□□□ 1.65
SIX4-203ENST00000556952 MMS19Q96T76 1030 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms