RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 LAMA4Q16363 1823 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 SMCHD1A6NHR9 2005 aa5.52□□□□□ -1.53
ATXN3-243ENST00000556671 ZSWIM8A7E2V4 1837 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 MATN2O00339 956 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 GPAA1O43292 621 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 FZD7O75084 574 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 GH2P01242 217 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 HMGCRP04035 888 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 SLC3A2P08195 630 aaKnown RBP5.51□□□□□ -1.53
ATXN3-243ENST00000556671 HSPA8P11142 646 aaKnown RBP5.51□□□□□ -1.53
ATXN3-243ENST00000556671 SDSP20132 328 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 COMTP21964 271 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 ADCY8P40145 1251 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 DUSP8Q13202 625 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 PPIL2Q13356 520 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 NOLC1Q14978 699 aaKnown RBP eCLIP5.51□□□□□ -1.53
ATXN3-243ENST00000556671 EIF4HQ15056 248 aaKnown RBP5.51□□□□□ -1.53
ATXN3-243ENST00000556671 TBR1Q16650 682 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 MCMDC2Q4G0Z9 681 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 RRP12Q5JTH9 1297 aaKnown RBP5.51□□□□□ -1.53
ATXN3-243ENST00000556671 CTR9Q6PD62 1173 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 LARP4Q71RC2 724 aaKnown RBP eCLIP5.51□□□□□ -1.53
ATXN3-243ENST00000556671 SKAP1Q86WV1 359 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 ZNF444Q8N0Y2 327 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-243ENST00000556671 CISD2Q8N5K1 135 aaKnown RBP5.51□□□□□ -1.53
ATXN3-243ENST00000556671 UBXN4Q92575 508 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 FAM227BQ96M60 508 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 ADOQ96SZ5 270 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 FEZ1Q99689 392 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 CELF4Q9BZC1 486 aaKnown RBP5.51□□□□□ -1.53
ATXN3-243ENST00000556671 NAPBQ9H115 298 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 AS3MTQ9HBK9 375 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 SNTG2Q9NY99 539 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 TMOD4Q9NZQ9 345 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 NDOR1Q9UHB4 597 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 HERC5Q9UII4 1024 aaKnown RBP5.51□□□□□ -1.53
ATXN3-243ENST00000556671 ZNF112Q9UJU3 913 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 SLC30A1Q9Y6M5 507 aa5.51□□□□□ -1.53
ATXN3-243ENST00000556671 BAZ2BQ9UIF8 2168 aaKnown RBP5.5□□□□□ -1.53
ATXN3-243ENST00000556671 PLXNA1Q9UIW2 1896 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 GSG1L2A8MUP6 293 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 BTBD19C9JJ37 291 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 SMIM22K7EJ46 135 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 PDHXO00330 501 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 ARHGAP6O43182 974 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 CA12O43570 354 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 RASGRP1O95267 797 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 SLPIP03973 132 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 ASNSP08243 561 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 MMEP08473 750 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 GNAT2P19087 354 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 KCNQ1P51787 676 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 HMGCS2P54868 508 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 RRP1BQ14684 758 aaKnown RBP5.5□□□□□ -1.53
ATXN3-243ENST00000556671 KIF22Q14807 665 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 SEPT2Q15019 361 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 SHROOM1Q2M3G4 852 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-243ENST00000556671 TM4SF20Q53R12 229 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 TTC22Q5TAA0 569 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 C12orf60Q5U649 245 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 AGBL4Q5VU57 503 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 KANK2Q63ZY3 851 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 TMEM200BQ69YZ2 307 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 TRIM68Q6AZZ1 485 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 FSTL4Q6MZW2 842 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 TMED8Q6PL24 325 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-243ENST00000556671 LRSAM1Q6UWE0 723 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 Q6ZSN1 163 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 CENPQQ7L2Z9 268 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-243ENST00000556671 FASTKD5Q7L8L6 764 aaKnown RBP5.5□□□□□ -1.53
ATXN3-243ENST00000556671 CCAR1Q8IX12 1150 aaKnown RBP5.5□□□□□ -1.53
ATXN3-243ENST00000556671 SLC44A5Q8NCS7 719 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 SLC7A14Q8TBB6 771 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 BRI3BPQ8WY22 251 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 DPYSL5Q9BPU6 564 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 R3HDMLQ9H3Y0 253 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 MSL2Q9HCI7 577 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 HELLSQ9NRZ9 838 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 UCKL1Q9NWZ5 548 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 CPA4Q9UI42 421 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 COQ6Q9Y2Z9 468 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 NR2E1Q9Y466 385 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 DDX60LQ5H9U9 1706 aaKnown RBP5.5□□□□□ -1.53
ATXN3-243ENST00000556671 MYH7BA7E2Y1 1941 aa5.5□□□□□ -1.53
ATXN3-243ENST00000556671 A0A0D9SFI3 127 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 HIP1O00291 1037 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 SCDO00767 359 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 CXCL11O14625 94 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 RANBP6O60518 1105 aaKnown RBP5.49□□□□□ -1.53
ATXN3-243ENST00000556671 CDC14BO60729 498 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 PRDM1O75626 825 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 HAND2P61296 217 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 CD83Q01151 205 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 CRHR2Q13324 411 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 FAM47AQ5JRC9 791 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 USP30Q70CQ3 517 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 USP51Q70EK9 711 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 OVCH1Q7RTY7 1134 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 POLNQ7Z5Q5 900 aa5.49□□□□□ -1.53
ATXN3-243ENST00000556671 FAM43AQ8N2R8 423 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms