RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 SCARA5Q6ZMJ2 495 aa18.68■□□□□ 0.58
TUBB3-211ENST00000556536 ARHGEF19Q8IW93 802 aa18.68■□□□□ 0.58
TUBB3-211ENST00000556536 RNF168Q8IYW5 571 aaPredicted RBP18.68■□□□□ 0.58
TUBB3-211ENST00000556536 CCDC150Q8NCX0 1101 aa18.68■□□□□ 0.58
TUBB3-211ENST00000556536 SAMD11Q96NU1 681 aa18.68■□□□□ 0.58
TUBB3-211ENST00000556536 ERGIC2Q96RQ1 377 aa18.68■□□□□ 0.58
TUBB3-211ENST00000556536 LSM14BQ9BX40 385 aaKnown RBP18.68■□□□□ 0.58
TUBB3-211ENST00000556536 IMPG2Q9BZV3 1241 aa18.68■□□□□ 0.58
TUBB3-211ENST00000556536 SMYD3Q9H7B4 428 aa18.68■□□□□ 0.58
TUBB3-211ENST00000556536 ALG13Q9NP73 1137 aaKnown RBP18.68■□□□□ 0.58
TUBB3-211ENST00000556536 TIMM13Q9Y5L4 95 aaPredicted RBP18.68■□□□□ 0.58
TUBB3-211ENST00000556536 SF3B1O75533 1304 aaKnown RBP eCLIP18.68■□□□□ 0.583e-6■■■■■ 137.9
TUBB3-211ENST00000556536 FSD2A1L4K1 749 aa18.67■□□□□ 0.58
TUBB3-211ENST00000556536 EPOPA6NHQ4 379 aa18.67■□□□□ 0.58
TUBB3-211ENST00000556536 RB1P06400 928 aa18.67■□□□□ 0.58
TUBB3-211ENST00000556536 PAX3P23760 479 aa18.67■□□□□ 0.58
TUBB3-211ENST00000556536 ASPAP45381 313 aa18.67■□□□□ 0.58
TUBB3-211ENST00000556536 TNNC1P63316 161 aa18.67■□□□□ 0.58
TUBB3-211ENST00000556536 SOWAHAQ2M3V2 549 aa18.67■□□□□ 0.58
TUBB3-211ENST00000556536 FAM171A1Q5VUB5 890 aa18.67■□□□□ 0.58
TUBB3-211ENST00000556536 GJB7Q6PEY0 223 aa18.67■□□□□ 0.58
TUBB3-211ENST00000556536 LIMS2Q7Z4I7 341 aa18.67■□□□□ 0.58
TUBB3-211ENST00000556536 DDX53Q86TM3 631 aaKnown RBP18.67■□□□□ 0.58
TUBB3-211ENST00000556536 FBXO22Q8NEZ5 403 aa18.67■□□□□ 0.58
TUBB3-211ENST00000556536 ARNTL2Q8WYA1 636 aa18.67■□□□□ 0.58
TUBB3-211ENST00000556536 NT5C1BQ96P26 610 aa18.67■□□□□ 0.58
TUBB3-211ENST00000556536 MMS19Q96T76 1030 aa18.67■□□□□ 0.58
TUBB3-211ENST00000556536 NIF3L1Q9GZT8 377 aa18.67■□□□□ 0.58
TUBB3-211ENST00000556536 SDCBP2Q9H190 292 aa18.67■□□□□ 0.58
TUBB3-211ENST00000556536 PCDHB8Q9UN66 801 aa18.67■□□□□ 0.58
TUBB3-211ENST00000556536 L1RE1Q9UN81 338 aa18.67■□□□□ 0.58
TUBB3-211ENST00000556536 CBFA2T2O43439 604 aa18.66■□□□□ 0.58
TUBB3-211ENST00000556536 TRAPPC3O43617 180 aa18.66■□□□□ 0.58
TUBB3-211ENST00000556536 DNAJB1P25685 340 aa18.66■□□□□ 0.58
TUBB3-211ENST00000556536 TKTP29401 623 aaKnown RBP18.66■□□□□ 0.58
TUBB3-211ENST00000556536 PBX1P40424 430 aa18.66■□□□□ 0.58
TUBB3-211ENST00000556536 RAP1GAPP47736 663 aa18.66■□□□□ 0.58
TUBB3-211ENST00000556536 CDH8P55286 799 aa18.66■□□□□ 0.58
TUBB3-211ENST00000556536 KRT17Q04695 432 aa18.66■□□□□ 0.58
TUBB3-211ENST00000556536 WSCD1Q658N2 575 aa18.66■□□□□ 0.58
TUBB3-211ENST00000556536 RRAGAQ7L523 313 aa18.66■□□□□ 0.58
TUBB3-211ENST00000556536 PDCL2Q8N4E4 241 aa18.66■□□□□ 0.58
TUBB3-211ENST00000556536 SPPL3Q8TCT6 385 aa18.66■□□□□ 0.58
TUBB3-211ENST00000556536 ATXN2LQ8WWM7 1075 aaKnown RBP18.66■□□□□ 0.58
TUBB3-211ENST00000556536 KAT5Q92993 513 aa18.66■□□□□ 0.58
TUBB3-211ENST00000556536 GAS2L1Q99501 681 aaPredicted RBP18.66■□□□□ 0.58
TUBB3-211ENST00000556536 ARID3AQ99856 593 aa18.66■□□□□ 0.58
TUBB3-211ENST00000556536 C11orf84Q9BUA3 381 aaPredicted RBP18.66■□□□□ 0.58
TUBB3-211ENST00000556536 AJAP1Q9UKB5 411 aaPredicted RBP18.66■□□□□ 0.58
TUBB3-211ENST00000556536 GBF1Q92538 1859 aa18.66■□□□□ 0.58
TUBB3-211ENST00000556536 CHD7Q9P2D1 2997 aa18.66■□□□□ 0.58
TUBB3-211ENST00000556536 KIAA1671Q9BY89 1806 aa18.65■□□□□ 0.58
TUBB3-211ENST00000556536 GOLGA6L3A6NEY3 463 aa18.65■□□□□ 0.58
TUBB3-211ENST00000556536 EPHB6O15197 1021 aa18.65■□□□□ 0.58
TUBB3-211ENST00000556536 GRM6O15303 877 aa18.65■□□□□ 0.58
TUBB3-211ENST00000556536 HUS1O60921 280 aa18.65■□□□□ 0.58
TUBB3-211ENST00000556536 NOL4O94818 638 aa18.65■□□□□ 0.58
TUBB3-211ENST00000556536 SOD2P04179 222 aa18.65■□□□□ 0.58
TUBB3-211ENST00000556536 WEE2P0C1S8 567 aa18.65■□□□□ 0.58
TUBB3-211ENST00000556536 ODC1P11926 461 aa18.65■□□□□ 0.58
TUBB3-211ENST00000556536 FGFR3P22607 806 aa18.65■□□□□ 0.58
TUBB3-211ENST00000556536 ELAVL2Q12926 359 aaKnown RBP18.65■□□□□ 0.58
TUBB3-211ENST00000556536 GPM6BQ13491 265 aa18.65■□□□□ 0.58
TUBB3-211ENST00000556536 RTP2Q5QGT7 225 aa18.65■□□□□ 0.58
TUBB3-211ENST00000556536 KLHDC7AQ5VTJ3 777 aa18.65■□□□□ 0.58
TUBB3-211ENST00000556536 CEP57Q86XR8 500 aa18.65■□□□□ 0.58
TUBB3-211ENST00000556536 VPS52Q8N1B4 723 aa18.65■□□□□ 0.58
TUBB3-211ENST00000556536 TOP6BLQ8N6T0 577 aa18.65■□□□□ 0.58
TUBB3-211ENST00000556536 KBTBD7Q8WVZ9 684 aa18.65■□□□□ 0.58
TUBB3-211ENST00000556536 PCMTD1Q96MG8 357 aaPredicted RBP18.65■□□□□ 0.58
TUBB3-211ENST00000556536 MRPL45Q9BRJ2 306 aaKnown RBP18.65■□□□□ 0.58
TUBB3-211ENST00000556536 HERC2P3Q9BVR0 1158 aa18.65■□□□□ 0.58
TUBB3-211ENST00000556536 BCO2Q9BYV7 579 aa18.65■□□□□ 0.58
TUBB3-211ENST00000556536 TRIM5Q9C035 493 aa18.65■□□□□ 0.58
TUBB3-211ENST00000556536 GANQ9H2C0 597 aa18.65■□□□□ 0.58
TUBB3-211ENST00000556536 CHST7Q9NS84 486 aa18.65■□□□□ 0.58
TUBB3-211ENST00000556536 FAM207AQ9NSI2 230 aaPredicted RBP18.65■□□□□ 0.58
TUBB3-211ENST00000556536 APEX2Q9UBZ4 518 aa18.65■□□□□ 0.58
TUBB3-211ENST00000556536 A0A1W2PQC6 194 aa18.64■□□□□ 0.57
TUBB3-211ENST00000556536 H3BNC9 293 aa18.64■□□□□ 0.57
TUBB3-211ENST00000556536 CYP11A1P05108 521 aa18.64■□□□□ 0.57
TUBB3-211ENST00000556536 P4HA1P13674 534 aa18.64■□□□□ 0.57
TUBB3-211ENST00000556536 ZNF75DP51815 510 aa18.64■□□□□ 0.57
TUBB3-211ENST00000556536 CUL2Q13617 745 aa18.64■□□□□ 0.57
TUBB3-211ENST00000556536 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.64■□□□□ 0.57
TUBB3-211ENST00000556536 OSTM1Q86WC4 334 aa18.64■□□□□ 0.57
TUBB3-211ENST00000556536 PPM1KQ8N3J5 372 aa18.64■□□□□ 0.57
TUBB3-211ENST00000556536 APPL2Q8NEU8 664 aa18.64■□□□□ 0.57
TUBB3-211ENST00000556536 POF1BQ8WVV4 589 aa18.64■□□□□ 0.57
TUBB3-211ENST00000556536 KREMEN1Q96MU8 473 aa18.64■□□□□ 0.57
TUBB3-211ENST00000556536 TTPALQ9BTX7 342 aa18.64■□□□□ 0.57
TUBB3-211ENST00000556536 UBE2TQ9NPD8 197 aaPredicted RBP18.64■□□□□ 0.57
TUBB3-211ENST00000556536 PLCB1Q9NQ66 1216 aa18.64■□□□□ 0.57
TUBB3-211ENST00000556536 LZTS1Q9Y250 596 aa18.64■□□□□ 0.57
TUBB3-211ENST00000556536 SCN1AP35498 2009 aa18.63■□□□□ 0.57
TUBB3-211ENST00000556536 RFXAPO00287 272 aa18.63■□□□□ 0.57
TUBB3-211ENST00000556536 SYN3O14994 580 aa18.63■□□□□ 0.57
TUBB3-211ENST00000556536 HCRTO43612 131 aa18.63■□□□□ 0.57
TUBB3-211ENST00000556536 CSPG5O95196 566 aa18.63■□□□□ 0.57
TUBB3-211ENST00000556536 TYMPP19971 482 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms