RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 PALB2Q86YC2 1186 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 CCDC60Q8IWA6 550 aaPredicted RBP5.4□□□□□ -1.55
TMEM260-210ENST00000556422 GPC2Q8N158 579 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 LRRC57Q8N9N7 239 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 RDH13Q8NBN7 331 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 TMEM161BQ8NDZ6 487 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 SPATA4Q8NEY3 305 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 BRSK1Q8TDC3 778 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 GPRASP2Q96D09 838 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 RPGRIP1Q96KN7 1286 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 GORASP1Q9BQQ3 440 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.4□□□□□ -1.55
TMEM260-210ENST00000556422 MOV10L1Q9BXT6 1211 aaKnown RBP5.4□□□□□ -1.55
TMEM260-210ENST00000556422 PCIF1Q9H4Z3 704 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 PDLIM7Q9NR12 457 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 SNCAIPQ9Y6H5 919 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 ATP8B3O60423 1300 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 GOLGA8IPA6NC78 632 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 LRRIQ3A6PVS8 624 aaPredicted RBP5.4□□□□□ -1.55
TMEM260-210ENST00000556422 SLC16A4O15374 487 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 SUPT3HO75486 399 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 FTCDO95954 541 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 ADRB2P07550 413 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 SFNP31947 248 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 GNALP38405 381 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 PEX3P56589 373 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 MLLT1Q03111 559 aaPredicted RBP5.4□□□□□ -1.55
TMEM260-210ENST00000556422 ITGA7Q13683 1181 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 CCNG2Q16589 344 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 SH3D19Q5HYK7 790 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 TREML2Q5T2D2 321 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 ZNF746Q6NUN9 644 aaPredicted RBP5.4□□□□□ -1.55
TMEM260-210ENST00000556422 SLC39A4Q6P5W5 647 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 STXBP4Q6ZWJ1 553 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 BPHLQ86WA6 291 aaPredicted RBP5.4□□□□□ -1.55
TMEM260-210ENST00000556422 ARHGAP18Q8N392 663 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 CEP70Q8NHQ1 597 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 LMBR1Q8WVP7 490 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 NLRP7Q8WX94 980 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 SGCDQ92629 289 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 MS4A14Q96JA4 679 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 TEX13BQ9BXU2 312 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 PFDN4Q9NQP4 134 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 XPNPEP1Q9NQW7 623 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 RHBDL2Q9NX52 303 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 APEX2Q9UBZ4 518 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 TMED5Q9Y3A6 229 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 HYOU1Q9Y4L1 999 aa5.4□□□□□ -1.55
TMEM260-210ENST00000556422 EXOC3O60645 756 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 GFPT2O94808 682 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 DDHD2O94830 711 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 TCP1P17987 556 aaKnown RBP5.39□□□□□ -1.55
TMEM260-210ENST00000556422 CCND2P30279 289 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 MLH1P40692 756 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 COPAP53621 1224 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 C1QTNF8P60827 252 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 CKAP4Q07065 602 aaKnown RBP5.39□□□□□ -1.55
TMEM260-210ENST00000556422 VGLL4Q14135 290 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 DRAP1Q14919 205 aaPredicted RBP5.39□□□□□ -1.55
TMEM260-210ENST00000556422 EPC2Q52LR7 807 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 ARMC4Q5T2S8 1044 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 RBM20Q5T481 1227 aaKnown RBP5.39□□□□□ -1.55
TMEM260-210ENST00000556422 XRRA1Q6P2D8 792 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 ALKBH5Q6P6C2 394 aaKnown RBP5.39□□□□□ -1.55
TMEM260-210ENST00000556422 MMGT1Q8N4V1 131 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 ANKRD42Q8N9B4 389 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 KCNN1Q92952 543 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 C1orf74Q96LT6 269 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 STK33Q9BYT3 514 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 FHDC1Q9C0D6 1143 aaPredicted RBP5.39□□□□□ -1.55
TMEM260-210ENST00000556422 INTS2Q9H0H0 1204 aaKnown RBP5.39□□□□□ -1.55
TMEM260-210ENST00000556422 R3HDMLQ9H3Y0 253 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 TMEM206Q9H813 350 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 CAPN10Q9HC96 672 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 ANKEF1Q9NU02 776 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.39□□□□□ -1.55
TMEM260-210ENST00000556422 HSPBP1Q9NZL4 362 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 DNAJC12Q9UKB3 198 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 EDARQ9UNE0 448 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 PCDHA10Q9Y5I2 948 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 EMSYQ7Z589 1322 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 IGSF9BQ9UPX0 1349 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 ANK1P16157 1881 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 ANKRD63C9JTQ0 380 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 SEC24DO94855 1032 aaPredicted RBP5.39□□□□□ -1.55
TMEM260-210ENST00000556422 RECKO95980 971 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 ATP4AP20648 1035 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 SOX5P35711 763 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 NPTX2P47972 431 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 PDE6CP51160 858 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 MRPS25P82663 173 aaKnown RBP5.39□□□□□ -1.55
TMEM260-210ENST00000556422 MYL7Q01449 175 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 ALCAMQ13740 583 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 PRKG1Q13976 671 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 BOLA3Q53S33 107 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 XKR9Q5GH70 373 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 CEP85LQ5SZL2 805 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 TAS1R3Q7RTX0 852 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 MAP4K3Q8IVH8 894 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 TMEM151BQ8IW70 566 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms