RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 TOP2AP11388 1531 aaKnown RBP6.62□□□□□ -1.35
PRPF39-209ENST00000556353 TNKSO95271 1327 aa6.62□□□□□ -1.35
PRPF39-209ENST00000556353 MPPED1O15442 326 aa6.62□□□□□ -1.35
PRPF39-209ENST00000556353 PROM1O43490 865 aa6.62□□□□□ -1.35
PRPF39-209ENST00000556353 MALP21145 153 aa6.62□□□□□ -1.35
PRPF39-209ENST00000556353 ODF1Q14990 250 aa6.62□□□□□ -1.35
PRPF39-209ENST00000556353 KHDC1Q4VXA5 237 aaKnown RBP6.62□□□□□ -1.35
PRPF39-209ENST00000556353 KAZNQ674X7 775 aa6.62□□□□□ -1.35
PRPF39-209ENST00000556353 KIAA0895LQ68EN5 471 aa6.62□□□□□ -1.35
PRPF39-209ENST00000556353 ARHGEF25Q86VW2 580 aa6.62□□□□□ -1.35
PRPF39-209ENST00000556353 ADGRG5Q8IZF4 528 aa6.62□□□□□ -1.35
PRPF39-209ENST00000556353 MIER2Q8N344 545 aa6.62□□□□□ -1.35
PRPF39-209ENST00000556353 NSUN7Q8NE18 718 aaKnown RBP6.62□□□□□ -1.35
PRPF39-209ENST00000556353 SLC30A5Q8TAD4 765 aa6.62□□□□□ -1.35
PRPF39-209ENST00000556353 SNX19Q92543 992 aa6.62□□□□□ -1.35
PRPF39-209ENST00000556353 FBXL20Q96IG2 436 aa6.62□□□□□ -1.35
PRPF39-209ENST00000556353 MRC2Q9UBG0 1479 aa6.61□□□□□ -1.35
PRPF39-209ENST00000556353 WASHC2CQ9Y4E1 1318 aa6.61□□□□□ -1.35
PRPF39-209ENST00000556353 CCDC151A5D8V7 595 aa6.61□□□□□ -1.35
PRPF39-209ENST00000556353 F2RL2O00254 374 aa6.61□□□□□ -1.35
PRPF39-209ENST00000556353 SUN1O94901 812 aa6.61□□□□□ -1.35
PRPF39-209ENST00000556353 ZNF37AP17032 561 aaPredicted RBP6.61□□□□□ -1.35
PRPF39-209ENST00000556353 SMARCA1P28370 1054 aa6.61□□□□□ -1.35
PRPF39-209ENST00000556353 CYP2C19P33261 490 aa6.61□□□□□ -1.35
PRPF39-209ENST00000556353 POU6F2P78424 691 aaPredicted RBP6.61□□□□□ -1.35
PRPF39-209ENST00000556353 NBPF8Q3BBV2 869 aa6.61□□□□□ -1.35
PRPF39-209ENST00000556353 MICALCLQ6ZW33 695 aa6.61□□□□□ -1.35
PRPF39-209ENST00000556353 PDSS2Q86YH6 399 aa6.61□□□□□ -1.35
PRPF39-209ENST00000556353 TOR1AIP2Q8NFQ8 470 aa6.61□□□□□ -1.35
PRPF39-209ENST00000556353 SMAD5Q99717 465 aaKnown RBP6.61□□□□□ -1.35
PRPF39-209ENST00000556353 GNL3LQ9NVN8 582 aaKnown RBP6.61□□□□□ -1.35
PRPF39-209ENST00000556353 SIDT1Q9NXL6 827 aaKnown RBP6.61□□□□□ -1.35
PRPF39-209ENST00000556353 SPEF1Q9Y4P9 236 aa6.61□□□□□ -1.35
PRPF39-209ENST00000556353 RSF1Q96T23 1441 aaPredicted RBP6.6□□□□□ -1.35
PRPF39-209ENST00000556353 E7ENX8 843 aa6.6□□□□□ -1.35
PRPF39-209ENST00000556353 GNAI3P08754 354 aa6.6□□□□□ -1.35
PRPF39-209ENST00000556353 GNAI1P63096 354 aa6.6□□□□□ -1.35
PRPF39-209ENST00000556353 MC2RQ01718 297 aa6.6□□□□□ -1.35
PRPF39-209ENST00000556353 DSC2Q02487 901 aa6.6□□□□□ -1.35
PRPF39-209ENST00000556353 TAP2Q03519 686 aa6.6□□□□□ -1.35
PRPF39-209ENST00000556353 SNAPC2Q13487 334 aa6.6□□□□□ -1.35
PRPF39-209ENST00000556353 HLXQ14774 488 aaPredicted RBP6.6□□□□□ -1.35
PRPF39-209ENST00000556353 CCDC93Q567U6 631 aa6.6□□□□□ -1.35
PRPF39-209ENST00000556353 TAPT1Q6NXT6 567 aa6.6□□□□□ -1.35
PRPF39-209ENST00000556353 SLC4A10Q6U841 1118 aa6.6□□□□□ -1.35
PRPF39-209ENST00000556353 GRASPQ7Z6J2 395 aaPredicted RBP6.6□□□□□ -1.35
PRPF39-209ENST00000556353 LPIN2Q92539 896 aa6.6□□□□□ -1.35
PRPF39-209ENST00000556353 SCAMP4Q969E2 229 aa6.6□□□□□ -1.35
PRPF39-209ENST00000556353 SMOQ99835 787 aa6.6□□□□□ -1.35
PRPF39-209ENST00000556353 KLK15Q9H2R5 256 aa6.6□□□□□ -1.35
PRPF39-209ENST00000556353 BRD9Q9H8M2 597 aa6.6□□□□□ -1.35
PRPF39-209ENST00000556353 POLHQ9Y253 713 aa6.6□□□□□ -1.35
PRPF39-209ENST00000556353 PDS5BQ9NTI5 1447 aa6.59□□□□□ -1.35
PRPF39-209ENST00000556353 AKNAD1Q5T1N1 836 aa6.59□□□□□ -1.35
PRPF39-209ENST00000556353 TSHZ1Q6ZSZ6 1077 aa6.59□□□□□ -1.35
PRPF39-209ENST00000556353 PEG10Q86TG7 708 aaKnown RBP6.59□□□□□ -1.35
PRPF39-209ENST00000556353 C3orf20Q8ND61 904 aa6.59□□□□□ -1.35
PRPF39-209ENST00000556353 ZNF384Q8TF68 577 aa6.59□□□□□ -1.35
PRPF39-209ENST00000556353 TFAP2BQ92481 460 aa6.59□□□□□ -1.35
PRPF39-209ENST00000556353 LRIG1Q96JA1 1093 aa6.59□□□□□ -1.35
PRPF39-209ENST00000556353 PGBD1Q96JS3 809 aa6.59□□□□□ -1.35
PRPF39-209ENST00000556353 TRIB1Q96RU8 372 aa6.59□□□□□ -1.35
PRPF39-209ENST00000556353 RLIMQ9NVW2 624 aa6.59□□□□□ -1.35
PRPF39-209ENST00000556353 CFAP97Q9P2B7 532 aa6.59□□□□□ -1.35
PRPF39-209ENST00000556353 COL4A3BPQ9Y5P4 624 aa6.59□□□□□ -1.35
PRPF39-209ENST00000556353 NT5C1B-RDH14C9J2C7 533 aa6.58□□□□□ -1.36
PRPF39-209ENST00000556353 POLRMTO00411 1230 aaKnown RBP6.58□□□□□ -1.36
PRPF39-209ENST00000556353 ZRANB2O95218 330 aaKnown RBP eCLIP6.58□□□□□ -1.36
PRPF39-209ENST00000556353 ARIH2O95376 493 aa6.58□□□□□ -1.36
PRPF39-209ENST00000556353 MATN4O95460 622 aa6.58□□□□□ -1.36
PRPF39-209ENST00000556353 GJB1P08034 283 aa6.58□□□□□ -1.36
PRPF39-209ENST00000556353 IL12RB1P42701 662 aa6.58□□□□□ -1.36
PRPF39-209ENST00000556353 RECQLP46063 649 aaPredicted RBP6.58□□□□□ -1.36
PRPF39-209ENST00000556353 MAPK10P53779 464 aa6.58□□□□□ -1.36
PRPF39-209ENST00000556353 PSMC1P62191 440 aaKnown RBP6.58□□□□□ -1.36
PRPF39-209ENST00000556353 PTPRRQ15256 657 aa6.58□□□□□ -1.36
PRPF39-209ENST00000556353 COLEC12Q5KU26 742 aa6.58□□□□□ -1.36
PRPF39-209ENST00000556353 THEMIS2Q5TEJ8 643 aa6.58□□□□□ -1.36
PRPF39-209ENST00000556353 TMPRSS9Q7Z410 1059 aa6.58□□□□□ -1.36
PRPF39-209ENST00000556353 B3GALNT2Q8NCR0 500 aa6.58□□□□□ -1.36
PRPF39-209ENST00000556353 UROC1Q96N76 676 aa6.58□□□□□ -1.36
PRPF39-209ENST00000556353 ASPSCR1Q9BZE9 553 aa6.58□□□□□ -1.36
PRPF39-209ENST00000556353 PCDH12Q9NPG4 1184 aa6.58□□□□□ -1.36
PRPF39-209ENST00000556353 IL17RBQ9NRM6 502 aa6.58□□□□□ -1.36
PRPF39-209ENST00000556353 ASB6Q9NWX5 421 aa6.58□□□□□ -1.36
PRPF39-209ENST00000556353 CFTRP13569 1480 aa6.58□□□□□ -1.36
PRPF39-209ENST00000556353 ZNF785A8K8V0 405 aa6.57□□□□□ -1.36
PRPF39-209ENST00000556353 E9PLN8 166 aa6.57□□□□□ -1.36
PRPF39-209ENST00000556353 DTNBO60941 627 aa6.57□□□□□ -1.36
PRPF39-209ENST00000556353 PROP1O75360 226 aa6.57□□□□□ -1.36
PRPF39-209ENST00000556353 C1QL1O75973 258 aa6.57□□□□□ -1.36
PRPF39-209ENST00000556353 SNUPNO95149 360 aaKnown RBP6.57□□□□□ -1.36
PRPF39-209ENST00000556353 FTH1P19P0C7X4 201 aa6.57□□□□□ -1.36
PRPF39-209ENST00000556353 PPP3CBP16298 524 aa6.57□□□□□ -1.36
PRPF39-209ENST00000556353 GRIA3P42263 894 aa6.57□□□□□ -1.36
PRPF39-209ENST00000556353 NPTX2P47972 431 aa6.57□□□□□ -1.36
PRPF39-209ENST00000556353 FXR1P51114 621 aaKnown RBP eCLIP6.57□□□□□ -1.36
PRPF39-209ENST00000556353 NHLH1Q02575 133 aa6.57□□□□□ -1.36
PRPF39-209ENST00000556353 ITIH3Q06033 890 aa6.57□□□□□ -1.36
PRPF39-209ENST00000556353 ZCRB1Q8TBF4 217 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms