RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-238	ENST00000556288	STARD7	Q9NQZ5	370 aa		5.28	□□□□□ -1.56
ATXN3-238	ENST00000556288	MAP3K20	Q9NYL2	800 aa	Known RBP	5.28	□□□□□ -1.56
ATXN3-238	ENST00000556288	VPS54	Q9P1Q0	977 aa		5.28	□□□□□ -1.56
ATXN3-238	ENST00000556288	NRBP1	Q9UHY1	535 aa		5.28	□□□□□ -1.56
ATXN3-238	ENST00000556288	ACSL6	Q9UKU0	697 aa		5.28	□□□□□ -1.56
ATXN3-238	ENST00000556288	LIMCH1	Q9UPQ0	1083 aa		5.28	□□□□□ -1.56
ATXN3-238	ENST00000556288	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	5.28	□□□□□ -1.56
ATXN3-238	ENST00000556288	CENPF	P49454	3210 aa		5.28	□□□□□ -1.56
ATXN3-238	ENST00000556288	ASTN1	O14525	1302 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	DDX39A	O00148	427 aa	Known RBP	5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	MEIS2	O14770	477 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	PRODH	O43272	600 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	ADCY6	O43306	1168 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	NPHS1	O60500	1241 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	PFKFB2	O60825	505 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	DEXI	O95424	95 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	GGPS1	O95749	300 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	SCG5	P05408	212 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	IFNAR1	P17181	557 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	GNA11	P29992	359 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	CPT1A	P50416	773 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	GFRA1	P56159	465 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	GJA9	P57773	515 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	GUCY1B3	Q02153	619 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	MVK	Q03426	396 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	CYP4F3	Q08477	520 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	ME3	Q16798	604 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	LRRC26	Q2I0M4	334 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	PRSS53	Q2L4Q9	553 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	DUSP28	Q4G0W2	176 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	FBLN7	Q53RD9	439 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	ADGRF1	Q5T601	910 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	IQCE	Q6IPM2	695 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	KCNV1	Q6PIU1	500 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	SAMD3	Q8N6K7	520 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	FAM184A	Q8NB25	1140 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	IL31RA	Q8NI17	732 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	BICD2	Q8TD16	824 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	AFG1L	Q8WV93	481 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	KCTD13	Q8WZ19	329 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	INTS4	Q96HW7	963 aa	Known RBP	5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	SPATA33	Q96N06	139 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	AIFM3	Q96NN9	605 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	PDCD2L	Q9BRP1	358 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	RIC8A	Q9NPQ8	531 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	ARHGEF4	Q9NR80	690 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	BARHL2	Q9NY43	387 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	ORC3	Q9UBD5	711 aa	Predicted RBP	5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	TCEAL9	Q9UHQ7	104 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	KCNJ14	Q9UNX9	436 aa		5.27	□□□□□ -1.57
ATXN3-238	ENST00000556288	TNRC18	O15417	2968 aa	Predicted RBP	5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	TRAV20	A0A0B4J274	112 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	LOC102724159	A0A0B4J2E5	919 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	C7orf72	A4D263	438 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	ADAMTS3	O15072	1205 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	NKRF	O15226	690 aa	Known RBP eCLIP	5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	MEFV	O15553	781 aa	Predicted RBP	5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	ARIH2	O95376	493 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	LARGE1	O95461	756 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	FOS	P01100	380 aa	Predicted RBP	5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	CAPNS1	P04632	268 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	MSL3P1	P0C860	447 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	PABPC1	P11940	636 aa	Known RBP	5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	SDHB	P21912	280 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	MRPS9	P82933	396 aa	Known RBP	5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	SP2	Q02086	613 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	TLE2	Q04725	743 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	ITGA7	Q13683	1181 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	PWP2	Q15269	919 aa	Known RBP	5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	NTRK3	Q16288	839 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	PKN1	Q16512	942 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	TRIM60	Q495X7	471 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	PRR23B	Q6ZRT6	265 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	PLA2G4D	Q86XP0	818 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	BLID	Q8IZY5	108 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	KREMEN2	Q8NCW0	462 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	KLHDC9	Q8NEP7	349 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	CCDC148	Q8NFR7	591 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	WASF1	Q92558	559 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	DIO2	Q92813	273 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	ZSCAN31	Q96LW9	406 aa	Predicted RBP	5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	DIRC2	Q96SL1	478 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	MTG1	Q9BT17	334 aa	Predicted RBP	5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	RNF26	Q9BY78	433 aa	Predicted RBP	5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	ANO3	Q9BYT9	981 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	AGXT2	Q9BYV1	514 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	KATNBL1	Q9H079	304 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	GLT8D2	Q9H1C3	349 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	NSUN3	Q9H649	340 aa	Known RBP	5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	BCAS3	Q9H6U6	928 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	PDLIM7	Q9NR12	457 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	GJB4	Q9NTQ9	266 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	GULP1	Q9UBP9	304 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	TET1	Q8NFU7	2136 aa		5.26	□□□□□ -1.57
ATXN3-238	ENST00000556288	SCN10A	Q9Y5Y9	1956 aa		5.25	□□□□□ -1.57
ATXN3-238	ENST00000556288	MYH15	Q9Y2K3	1946 aa		5.25	□□□□□ -1.57
ATXN3-238	ENST00000556288		A0A0U1RQG5	324 aa	Predicted RBP	5.25	□□□□□ -1.57

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