RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 CDV3Q9UKY7 258 aaKnown RBP12□□□□□ -0.49
CHGA-205ENST00000556098 SSX2IPQ9Y2D8 614 aa12□□□□□ -0.49
CHGA-205ENST00000556098 ZNF292O60281 2723 aa12□□□□□ -0.49
CHGA-205ENST00000556098 WDR87Q6ZQQ6 2873 aa12□□□□□ -0.49
CHGA-205ENST00000556098 GVINP1Q7Z2Y8 2422 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 NPHP3-ACAD11A0A0J9YXS1 232 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 GTPBP10A4D1E9 387 aaKnown RBP11.99□□□□□ -0.49
CHGA-205ENST00000556098 KIAA0391O15091 583 aaKnown RBP11.99□□□□□ -0.49
CHGA-205ENST00000556098 ZSCAN12O43309 604 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 LAMP2P13473 410 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 GLULP15104 373 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 CD72P21854 359 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 FSHRP23945 695 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 SCNN1GP51170 649 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 NCKAP1LP55160 1127 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 NTHL1P78549 312 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 GTF2BQ00403 316 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 CDC42EP1Q00587 391 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 ADAM9Q13443 819 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 TARBP2Q15633 366 aaKnown RBP11.99□□□□□ -0.49
CHGA-205ENST00000556098 HSP90AA4PQ58FG1 418 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 VARS2Q5ST30 1063 aaKnown RBP11.99□□□□□ -0.49
CHGA-205ENST00000556098 GRASPQ7Z6J2 395 aaPredicted RBP11.99□□□□□ -0.49
CHGA-205ENST00000556098 TRIM59Q8IWR1 403 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 TC2NQ8N9U0 490 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 CMASQ8NFW8 434 aaPredicted RBP11.99□□□□□ -0.49
CHGA-205ENST00000556098 RSPH1Q8WYR4 309 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 SECISBP2LQ93073 1101 aaKnown RBP11.99□□□□□ -0.49
CHGA-205ENST00000556098 HPS3Q969F9 1004 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 CPB2Q96IY4 423 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 IFT74Q96LB3 600 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 ACCSQ96QU6 501 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 FIZ1Q96SL8 496 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 GAD1Q99259 594 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 BAG1Q99933 345 aaPredicted RBP11.99□□□□□ -0.49
CHGA-205ENST00000556098 NTPCRQ9BSD7 190 aaKnown RBP11.99□□□□□ -0.49
CHGA-205ENST00000556098 TRIM6Q9C030 488 aaPredicted RBP11.99□□□□□ -0.49
CHGA-205ENST00000556098 NDST4Q9H3R1 872 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 RRAGDQ9NQL2 400 aaPredicted RBP11.99□□□□□ -0.49
CHGA-205ENST00000556098 KANSL3Q9P2N6 904 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 STK39Q9UEW8 545 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 HES2Q9Y543 173 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 NOTCH4Q99466 2003 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 FRYLO94915 3013 aa11.99□□□□□ -0.49
CHGA-205ENST00000556098 CNTNAP2Q9UHC6 1331 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 DCDC2BA2VCK2 349 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 K7ENM7 598 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 TEX33O43247 280 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 TGM5O43548 720 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 USO1O60763 962 aaKnown RBP11.98□□□□□ -0.49
CHGA-205ENST00000556098 NR3C1P04150 777 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 TRIM21P19474 475 aaKnown RBP11.98□□□□□ -0.49
CHGA-205ENST00000556098 NPEPPSP55786 919 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 GPC5P78333 572 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 RAD51AP2Q09MP3 1159 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 HTR4Q13639 388 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 LPAL2Q16609 132 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 MIIPQ5JXC2 388 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 PHLDB3Q6NSJ2 640 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 TSSK4Q6SA08 328 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 PARM1Q6UWI2 310 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 ANO5Q75V66 913 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 USP37Q86T82 979 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 CEP57Q86XR8 500 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 TMTC1Q8IUR5 882 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 DAW1Q8N136 415 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 HASPINQ8TF76 798 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 ATRIPQ8WXE1 791 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 SLC7A3Q8WY07 619 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 ZNF707Q96C28 371 aaPredicted RBP11.98□□□□□ -0.49
CHGA-205ENST00000556098 SHDQ96IW2 340 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 CEP170P1Q96L14 293 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 ZFP42Q96MM3 310 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 KXD1Q9BQD3 176 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 RPP25Q9BUL9 199 aaKnown RBP11.98□□□□□ -0.49
CHGA-205ENST00000556098 ZNHIT6Q9NWK9 470 aaKnown RBP11.98□□□□□ -0.49
CHGA-205ENST00000556098 CACNG4Q9UBN1 327 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 ARMCX3Q9UH62 379 aaPredicted RBP11.98□□□□□ -0.49
CHGA-205ENST00000556098 CAPN11Q9UMQ6 739 aa11.98□□□□□ -0.49
CHGA-205ENST00000556098 LUC7L2Q9Y383 392 aaKnown RBP11.98□□□□□ -0.49
CHGA-205ENST00000556098 MTF2Q9Y483 593 aaPredicted RBP11.98□□□□□ -0.49
CHGA-205ENST00000556098 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.98□□□□□ -0.49
CHGA-205ENST00000556098 CACNA1AO00555 2505 aa11.97□□□□□ -0.49
CHGA-205ENST00000556098 EP300Q09472 2414 aaPredicted RBP11.97□□□□□ -0.49
CHGA-205ENST00000556098 ZMYM2Q9UBW7 1377 aa11.97□□□□□ -0.49
CHGA-205ENST00000556098 PES1O00541 588 aaKnown RBP11.97□□□□□ -0.49
CHGA-205ENST00000556098 LILRB3O75022 631 aa11.97□□□□□ -0.49
CHGA-205ENST00000556098 ZNF623O75123 536 aa11.97□□□□□ -0.49
CHGA-205ENST00000556098 MAFO75444 373 aaPredicted RBP11.97□□□□□ -0.49
CHGA-205ENST00000556098 STBD1O95210 358 aa11.97□□□□□ -0.49
CHGA-205ENST00000556098 GYPCP04921 128 aa11.97□□□□□ -0.49
CHGA-205ENST00000556098 PSMC2P35998 433 aaKnown RBP11.97□□□□□ -0.49
CHGA-205ENST00000556098 CASP5P51878 434 aa11.97□□□□□ -0.49
CHGA-205ENST00000556098 ZBED6P86452 979 aa11.97□□□□□ -0.49
CHGA-205ENST00000556098 CDK17Q00537 523 aa11.97□□□□□ -0.49
CHGA-205ENST00000556098 CACNB1Q02641 598 aaPredicted RBP11.97□□□□□ -0.49
CHGA-205ENST00000556098 LRMPQ12912 555 aa11.97□□□□□ -0.49
CHGA-205ENST00000556098 MLF2Q15773 248 aaPredicted RBP11.97□□□□□ -0.49
CHGA-205ENST00000556098 UBXN11Q5T124 520 aa11.97□□□□□ -0.49
CHGA-205ENST00000556098 LIN9Q5TKA1 542 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms