RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 PTPRN2Q92932 1015 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 GOLPH3Q9H4A6 298 aa11.23□□□□□ -0.61
ACTN1-216ENST00000556083 KRCC1Q9NPI7 259 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-216ENST00000556083 ZMYND10O75800 440 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 ICAM1P05362 532 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 OCM2P0CE71 109 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 OCMP0CE72 109 aaPredicted RBP11.22□□□□□ -0.61
ACTN1-216ENST00000556083 FAM200BP0CF97 657 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 TGFB3P10600 412 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 FBXW4P57775 412 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 MTMR2Q13614 643 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 NFE2Q16621 373 aaPredicted RBP11.22□□□□□ -0.61
ACTN1-216ENST00000556083 RABGAP1LQ5R372 815 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 E4F1Q66K89 784 aaPredicted RBP11.22□□□□□ -0.61
ACTN1-216ENST00000556083 NLRP9Q7RTR0 991 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 SPATA21Q7Z572 469 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 OXER1Q8TDS5 423 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 DTNBP1Q96EV8 351 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 GANQ9H2C0 597 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 ADA2Q9NZK5 511 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 APPL1Q9UKG1 709 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 SNX9Q9Y5X1 595 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 ZNF263O14978 683 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 GSNP06396 782 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 PDHBP11177 359 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 NAMPTP43490 491 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 ARL4DP49703 201 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 SLC7A5Q01650 507 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 ANKRD40Q6AI12 368 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 MRNIPQ6NTE8 343 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 PASD1Q8IV76 773 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 SAAL1Q96ER3 474 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 CYFIP2Q96F07 1278 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 TSC22D3Q99576 134 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 KANSL3Q9P2N6 904 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 SPATA31A1Q5TZJ5 1347 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 DCCP43146 1447 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 FAM47DPA6NHR8 397 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 EVPLLA8MZ36 301 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 OGTO15294 1046 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 PPP1R37O75864 691 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 NPTXRO95502 500 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 ATP5BP06576 529 aaKnown RBP11.22□□□□□ -0.61
ACTN1-216ENST00000556083 CYP2C9P11712 490 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 TERF2Q15554 542 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 TDRD10Q5VZ19 366 aaKnown RBP11.22□□□□□ -0.61
ACTN1-216ENST00000556083 PKN3Q6P5Z2 889 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 RPAINQ86UA6 219 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 RIN2Q8WYP3 895 aaPredicted RBP11.22□□□□□ -0.61
ACTN1-216ENST00000556083 PHF21AQ96BD5 680 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 DDX47Q9H0S4 455 aaKnown RBP11.22□□□□□ -0.61
ACTN1-216ENST00000556083 TMEM260Q9NX78 707 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 CAMSAP1Q5T5Y3 1602 aa11.22□□□□□ -0.61
ACTN1-216ENST00000556083 GTPBP10A4D1E9 387 aaKnown RBP11.21□□□□□ -0.61
ACTN1-216ENST00000556083 ZW10O43264 779 aa11.21□□□□□ -0.61
ACTN1-216ENST00000556083 VCLP18206 1134 aa11.21□□□□□ -0.61
ACTN1-216ENST00000556083 PRKAA2P54646 552 aa11.21□□□□□ -0.61
ACTN1-216ENST00000556083 STX5Q13190 355 aa11.21□□□□□ -0.61
ACTN1-216ENST00000556083 ADRM1Q16186 407 aa11.21□□□□□ -0.61
ACTN1-216ENST00000556083 GRAMD4Q6IC98 578 aa11.21□□□□□ -0.61
ACTN1-216ENST00000556083 SLC20A1Q8WUM9 679 aa11.21□□□□□ -0.61
ACTN1-216ENST00000556083 OSBPL8Q9BZF1 889 aa11.21□□□□□ -0.61
ACTN1-216ENST00000556083 PKP3Q9Y446 797 aa11.21□□□□□ -0.61
ACTN1-216ENST00000556083 EIF3HO15372 352 aaKnown RBP eCLIP11.21□□□□□ -0.61
ACTN1-216ENST00000556083 VDRP11473 427 aa11.21□□□□□ -0.61
ACTN1-216ENST00000556083 OAZ1P54368 228 aa11.21□□□□□ -0.61
ACTN1-216ENST00000556083 PURAQ00577 322 aaKnown RBP11.21□□□□□ -0.61
ACTN1-216ENST00000556083 PRKCEQ02156 737 aa11.21□□□□□ -0.61
ACTN1-216ENST00000556083 RBBP7Q16576 425 aa11.21□□□□□ -0.61
ACTN1-216ENST00000556083 PPIL6Q8IXY8 311 aa11.21□□□□□ -0.61
ACTN1-216ENST00000556083 MMGT1Q8N4V1 131 aa11.21□□□□□ -0.61
ACTN1-216ENST00000556083 SRPK1Q96SB4 655 aaKnown RBP11.21□□□□□ -0.61
ACTN1-216ENST00000556083 IPPQ9Y573 584 aa11.21□□□□□ -0.61
ACTN1-216ENST00000556083 STK25O00506 426 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 KCNN4O15554 427 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 TIMM44O43615 452 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 NEK2P51955 445 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 NAA20P61599 178 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 TGFB2P61812 414 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 FAM83EQ2M2I3 478 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 TTC39BQ5VTQ0 682 aaPredicted RBP11.21□□□□□ -0.62
ACTN1-216ENST00000556083 ARMC6Q6NXE6 501 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 NIPA1Q7RTP0 329 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 ERO1BQ86YB8 467 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 DHX40Q8IX18 779 aaKnown RBP11.21□□□□□ -0.62
ACTN1-216ENST00000556083 SHCBP1Q8NEM2 672 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 FEZF2Q8TBJ5 459 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 GMCL1Q96IK5 515 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 RBM15Q96T37 977 aaKnown RBP eCLIP11.21□□□□□ -0.628e-6■■■■■ 30.1
ACTN1-216ENST00000556083 SIK2Q9H0K1 926 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 CLTCL1P53675 1640 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 E7ENQ6 273 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 CYP26A1O43174 497 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 CD2BP2O95400 341 aaKnown RBP11.21□□□□□ -0.62
ACTN1-216ENST00000556083 MYL2P10916 166 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 CACNB3P54284 484 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 GALCP54803 685 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 PLD1Q13393 1074 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 TRIM60Q495X7 471 aa11.21□□□□□ -0.62
ACTN1-216ENST00000556083 CDC42EP5Q6NZY7 148 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms