RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 PDZD7Q9H5P4 517 aa10.05□□□□□ -0.8
PRKCH-218ENST00000555628 CACNA1EQ15878 2313 aa10.05□□□□□ -0.8
PRKCH-218ENST00000555628 MYBPHLA2RUH7 354 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 DKC1O60832 514 aaKnown RBP eCLIP10.04□□□□□ -0.8
PRKCH-218ENST00000555628 SLITRK3O94933 977 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 THP07101 528 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 PTPN2P17706 415 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 SOX9P48436 509 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 MRPL58Q14197 206 aaKnown RBP10.04□□□□□ -0.8
PRKCH-218ENST00000555628 UPP1Q16831 310 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 INF2Q27J81 1249 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 AASDHQ4L235 1098 aaPredicted RBP10.04□□□□□ -0.8
PRKCH-218ENST00000555628 XKR9Q5GH70 373 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 RNF20Q5VTR2 975 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 PPP4R3AQ6IN85 833 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 PKN3Q6P5Z2 889 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 MFSD6LQ8IWD5 586 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 ZNF461Q8TAF7 563 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 BRF1Q92994 677 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 CHFRQ96EP1 664 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 MSANTD3Q96H12 275 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 DYDC2Q96IM9 177 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 PRIMPOLQ96LW4 560 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 KCTD15Q96SI1 283 aaPredicted RBP10.04□□□□□ -0.8
PRKCH-218ENST00000555628 HSD17B14Q9BPX1 270 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 MKNK1Q9BUB5 465 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 SLC26A6Q9BXS9 759 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 LRRC3Q9BY71 257 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 CCDC113Q9H0I3 377 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 ARRDC1-AS1Q9H2J1 176 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 ZSWIM4Q9H7M6 989 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 NCOA5Q9HCD5 579 aaKnown RBP10.04□□□□□ -0.8
PRKCH-218ENST00000555628 SNTG2Q9NY99 539 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 CEP72Q9P209 647 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 PARP2Q9UGN5 583 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 INSL5Q9Y5Q6 135 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 MAST4O15021 2626 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 KIAA1549LQ6ZVL6 1849 aa10.04□□□□□ -0.8
PRKCH-218ENST00000555628 CCDC163A0A0D9SF12 145 aa10.03□□□□□ -0.8
PRKCH-218ENST00000555628 SRRM3A6NNA2 597 aaPredicted RBP10.03□□□□□ -0.8
PRKCH-218ENST00000555628 I3L4J1 428 aa10.03□□□□□ -0.8
PRKCH-218ENST00000555628 GIPC1O14908 333 aa10.03□□□□□ -0.8
PRKCH-218ENST00000555628 TBX3O15119 743 aa10.03□□□□□ -0.8
PRKCH-218ENST00000555628 VNN2O95498 520 aa10.03□□□□□ -0.8
PRKCH-218ENST00000555628 ATF2P15336 505 aa10.03□□□□□ -0.8
PRKCH-218ENST00000555628 RARRES1P49788 294 aa10.03□□□□□ -0.8
PRKCH-218ENST00000555628 CLCNKBP51801 687 aa10.03□□□□□ -0.8
PRKCH-218ENST00000555628 NLRP5P59047 1200 aa10.03□□□□□ -0.8
PRKCH-218ENST00000555628 CYP4A11Q02928 519 aa10.03□□□□□ -0.8
PRKCH-218ENST00000555628 SOX4Q06945 474 aaPredicted RBP10.03□□□□□ -0.8
PRKCH-218ENST00000555628 TFDP1Q14186 410 aa10.03□□□□□ -0.8
PRKCH-218ENST00000555628 CTTNQ14247 550 aaKnown RBP10.03□□□□□ -0.8
PRKCH-218ENST00000555628 HEATR6Q6AI08 1181 aaKnown RBP10.03□□□□□ -0.8
PRKCH-218ENST00000555628 PSAPL1Q6NUJ1 521 aa10.03□□□□□ -0.8
PRKCH-218ENST00000555628 Q6ZUG5 572 aa10.03□□□□□ -0.8
PRKCH-218ENST00000555628 ANKS3Q6ZW76 656 aa10.03□□□□□ -0.8
PRKCH-218ENST00000555628 KBTBD6Q86V97 674 aa10.03□□□□□ -0.8
PRKCH-218ENST00000555628 TMC8Q8IU68 726 aa10.03□□□□□ -0.8
PRKCH-218ENST00000555628 BLIDQ8IZY5 108 aa10.03□□□□□ -0.8
PRKCH-218ENST00000555628 FAM177A1Q8N128 213 aaPredicted RBP10.03□□□□□ -0.8
PRKCH-218ENST00000555628 GAB3Q8WWW8 586 aa10.03□□□□□ -0.8
PRKCH-218ENST00000555628 ZC3H10Q96K80 434 aaKnown RBP10.03□□□□□ -0.8
PRKCH-218ENST00000555628 AIFM3Q96NN9 605 aa10.03□□□□□ -0.8
PRKCH-218ENST00000555628 CORO1BQ9BR76 489 aa10.03□□□□□ -0.8
PRKCH-218ENST00000555628 SMOC1Q9H4F8 434 aa10.03□□□□□ -0.8
PRKCH-218ENST00000555628 PCDHGA5Q9Y5G8 931 aa10.03□□□□□ -0.8
PRKCH-218ENST00000555628 KALRNO60229 2985 aa10.03□□□□□ -0.8
PRKCH-218ENST00000555628 ASCC3Q8N3C0 2202 aaKnown RBP10.02□□□□□ -0.81
PRKCH-218ENST00000555628 TMEM8BA6NDV4 472 aa10.02□□□□□ -0.81
PRKCH-218ENST00000555628 SLC38A8A6NNN8 435 aa10.02□□□□□ -0.81
PRKCH-218ENST00000555628 HEPACAM2A8MVW5 462 aa10.02□□□□□ -0.81
PRKCH-218ENST00000555628 SPECC1L-ADORA2AF8WAN1 911 aa10.02□□□□□ -0.81
PRKCH-218ENST00000555628 CHADO15335 359 aa10.02□□□□□ -0.81
PRKCH-218ENST00000555628 MEFVO15553 781 aaPredicted RBP10.02□□□□□ -0.81
PRKCH-218ENST00000555628 EXTL3O43909 919 aa10.02□□□□□ -0.81
PRKCH-218ENST00000555628 B3GAT3O94766 335 aa10.02□□□□□ -0.81
PRKCH-218ENST00000555628 TOP3BO95985 862 aaKnown RBP10.02□□□□□ -0.81
PRKCH-218ENST00000555628 HMGB1P09429 215 aaKnown RBP10.02□□□□□ -0.81
PRKCH-218ENST00000555628 GCFC2P16383 781 aaKnown RBP10.02□□□□□ -0.81
PRKCH-218ENST00000555628 PDIA3P30101 505 aaKnown RBP10.02□□□□□ -0.81
PRKCH-218ENST00000555628 BRCC3P46736 316 aa10.02□□□□□ -0.81
PRKCH-218ENST00000555628 NCBP1Q09161 790 aaKnown RBP10.02□□□□□ -0.81
PRKCH-218ENST00000555628 LRRC32Q14392 662 aa10.02□□□□□ -0.81
PRKCH-218ENST00000555628 KRT32Q14532 448 aa10.02□□□□□ -0.81
PRKCH-218ENST00000555628 XKR4Q5GH76 650 aa10.02□□□□□ -0.81
PRKCH-218ENST00000555628 DGKKQ5KSL6 1271 aa10.02□□□□□ -0.81
PRKCH-218ENST00000555628 EEF1DP3Q658K8 133 aa10.02□□□□□ -0.81
PRKCH-218ENST00000555628 TCEAL6Q6IPX3 200 aa10.02□□□□□ -0.81
PRKCH-218ENST00000555628 C1orf228Q6PIY5 440 aa10.02□□□□□ -0.81
PRKCH-218ENST00000555628 OTUD6AQ7L8S5 288 aa10.02□□□□□ -0.81
PRKCH-218ENST00000555628 BEST2Q8NFU1 509 aa10.02□□□□□ -0.81
PRKCH-218ENST00000555628 SHKBP1Q8TBC3 707 aa10.02□□□□□ -0.81
PRKCH-218ENST00000555628 ZSCAN18Q8TBC5 510 aaPredicted RBP10.02□□□□□ -0.81
PRKCH-218ENST00000555628 BSNDQ8WZ55 320 aa10.02□□□□□ -0.81
PRKCH-218ENST00000555628 TCEAL3Q969E4 200 aa10.02□□□□□ -0.81
PRKCH-218ENST00000555628 POLR3FQ9H1D9 316 aaPredicted RBP10.02□□□□□ -0.81
PRKCH-218ENST00000555628 C8orf33Q9H7E9 229 aaPredicted RBP10.02□□□□□ -0.81
PRKCH-218ENST00000555628 GOLGA2P5Q9HBQ8 144 aa10.02□□□□□ -0.81
PRKCH-218ENST00000555628 GPRC5CQ9NQ84 441 aa10.02□□□□□ -0.81
PRKCH-218ENST00000555628 ANKEF1Q9NU02 776 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms