RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 PLD1Q13393 1074 aa14.45□□□□□ -0.1
TUBB3-207ENST00000554927 MRPL58Q14197 206 aaKnown RBP14.45□□□□□ -0.1
TUBB3-207ENST00000554927 C8orf34Q49A92 452 aa14.45□□□□□ -0.1
TUBB3-207ENST00000554927 NT5DC1Q5TFE4 455 aa14.45□□□□□ -0.1
TUBB3-207ENST00000554927 DAB2IPQ5VWQ8 1189 aa14.45□□□□□ -0.1
TUBB3-207ENST00000554927 PADI6Q6TGC4 694 aa14.45□□□□□ -0.1
TUBB3-207ENST00000554927 CEP120Q8N960 986 aa14.45□□□□□ -0.1
TUBB3-207ENST00000554927 KDF1Q8NAX2 398 aaPredicted RBP14.45□□□□□ -0.1
TUBB3-207ENST00000554927 SUSD3Q96L08 255 aa14.45□□□□□ -0.1
TUBB3-207ENST00000554927 PGLYRP2Q96PD5 576 aa14.45□□□□□ -0.1
TUBB3-207ENST00000554927 ADAM33Q9BZ11 813 aa14.45□□□□□ -0.1
TUBB3-207ENST00000554927 ATXN3LQ9H3M9 355 aa14.45□□□□□ -0.1
TUBB3-207ENST00000554927 LRWD1Q9UFC0 647 aa14.45□□□□□ -0.1
TUBB3-207ENST00000554927 FASNP49327 2511 aaKnown RBP14.44□□□□□ -0.1
TUBB3-207ENST00000554927 TMEM8BA6NDV4 472 aa14.44□□□□□ -0.1
TUBB3-207ENST00000554927 C4orf47A7E2U8 309 aa14.44□□□□□ -0.1
TUBB3-207ENST00000554927 ATG13O75143 517 aa14.44□□□□□ -0.1
TUBB3-207ENST00000554927 MED24O75448 989 aa14.44□□□□□ -0.1
TUBB3-207ENST00000554927 CYP11B2P19099 503 aa14.44□□□□□ -0.1
TUBB3-207ENST00000554927 RPL9P32969 192 aaKnown RBP14.44□□□□□ -0.1
TUBB3-207ENST00000554927 CCT6AP40227 531 aaKnown RBP14.44□□□□□ -0.1
TUBB3-207ENST00000554927 GRM5P41594 1212 aa14.44□□□□□ -0.1
TUBB3-207ENST00000554927 ALDH1A3P47895 512 aa14.44□□□□□ -0.1
TUBB3-207ENST00000554927 CREB5Q02930 508 aa14.44□□□□□ -0.1
TUBB3-207ENST00000554927 PDIA5Q14554 519 aa14.44□□□□□ -0.1
TUBB3-207ENST00000554927 ELF2Q15723 593 aa14.44□□□□□ -0.1
TUBB3-207ENST00000554927 ZNF568Q3ZCX4 644 aa14.44□□□□□ -0.1
TUBB3-207ENST00000554927 ARHGAP15Q53QZ3 475 aa14.44□□□□□ -0.1
TUBB3-207ENST00000554927 PKN3Q6P5Z2 889 aa14.44□□□□□ -0.1
TUBB3-207ENST00000554927 DDX12PQ92771 950 aa14.44□□□□□ -0.1
TUBB3-207ENST00000554927 C18orf25Q96B23 403 aaPredicted RBP14.44□□□□□ -0.1
TUBB3-207ENST00000554927 ZMAT2Q96NC0 199 aaKnown RBP14.44□□□□□ -0.1
TUBB3-207ENST00000554927 TBC1D32Q96NH3 1257 aa14.44□□□□□ -0.1
TUBB3-207ENST00000554927 TMEM209Q96SK2 561 aa14.44□□□□□ -0.1
TUBB3-207ENST00000554927 POLD4Q9HCU8 107 aa14.44□□□□□ -0.1
TUBB3-207ENST00000554927 DAXXQ9UER7 740 aaPredicted RBP14.44□□□□□ -0.1
TUBB3-207ENST00000554927 GREB1Q4ZG55 1949 aa14.44□□□□□ -0.1
TUBB3-207ENST00000554927 ZZEF1O43149 2961 aa14.43□□□□□ -0.1
TUBB3-207ENST00000554927 CCDC163A0A0D9SF12 145 aa14.43□□□□□ -0.1
TUBB3-207ENST00000554927 K7ERI5 159 aa14.43□□□□□ -0.1
TUBB3-207ENST00000554927 LAD1O00515 517 aa14.43□□□□□ -0.1
TUBB3-207ENST00000554927 AKAP3O75969 853 aa14.43□□□□□ -0.1
TUBB3-207ENST00000554927 CAVIN2O95810 425 aa14.43□□□□□ -0.1
TUBB3-207ENST00000554927 U2AF2P26368 475 aaKnown RBP eCLIP14.43□□□□□ -0.1
TUBB3-207ENST00000554927 FXR2P51116 673 aaKnown RBP eCLIP14.43□□□□□ -0.1
TUBB3-207ENST00000554927 PLCB2Q00722 1185 aa14.43□□□□□ -0.1
TUBB3-207ENST00000554927 GRSF1Q12849 480 aaKnown RBP eCLIP14.43□□□□□ -0.1
TUBB3-207ENST00000554927 PTPAQ15257 358 aa14.43□□□□□ -0.1
TUBB3-207ENST00000554927 ITPRIPL2Q3MIP1 535 aa14.43□□□□□ -0.1
TUBB3-207ENST00000554927 PLK5Q496M5 336 aa14.43□□□□□ -0.1
TUBB3-207ENST00000554927 GPR158Q5T848 1215 aa14.43□□□□□ -0.1
TUBB3-207ENST00000554927 SH3PXD2AQ5TCZ1 1133 aa14.43□□□□□ -0.1
TUBB3-207ENST00000554927 MCTP1Q6DN14 999 aa14.43□□□□□ -0.1
TUBB3-207ENST00000554927 TMC8Q8IU68 726 aa14.43□□□□□ -0.1
TUBB3-207ENST00000554927 ZC3H10Q96K80 434 aaKnown RBP14.43□□□□□ -0.1
TUBB3-207ENST00000554927 LRRC3BQ96PB8 259 aa14.43□□□□□ -0.1
TUBB3-207ENST00000554927 HHIPQ96QV1 700 aa14.43□□□□□ -0.1
TUBB3-207ENST00000554927 KIF2CQ99661 725 aa14.43□□□□□ -0.1
TUBB3-207ENST00000554927 TCHPQ9BT92 498 aa14.43□□□□□ -0.1
TUBB3-207ENST00000554927 CDT1Q9H211 546 aa14.43□□□□□ -0.1
TUBB3-207ENST00000554927 THG1LQ9NWX6 298 aaKnown RBP14.43□□□□□ -0.1
TUBB3-207ENST00000554927 TNFSF13BQ9Y275 285 aa14.43□□□□□ -0.1
TUBB3-207ENST00000554927 SRRM3A6NNA2 597 aaPredicted RBP14.42□□□□□ -0.1
TUBB3-207ENST00000554927 H3BQV1 296 aa14.42□□□□□ -0.1
TUBB3-207ENST00000554927 RHOBTB1O94844 696 aa14.42□□□□□ -0.1
TUBB3-207ENST00000554927 TOP3BO95985 862 aaKnown RBP14.42□□□□□ -0.1
TUBB3-207ENST00000554927 OR4Q2P0C623 313 aa14.42□□□□□ -0.1
TUBB3-207ENST00000554927 HARSP12081 509 aaKnown RBP14.42□□□□□ -0.1
TUBB3-207ENST00000554927 MCM2P49736 904 aa14.42□□□□□ -0.1
TUBB3-207ENST00000554927 YWHAHQ04917 246 aaPredicted RBP14.42□□□□□ -0.1
TUBB3-207ENST00000554927 DUSP4Q13115 394 aa14.42□□□□□ -0.1
TUBB3-207ENST00000554927 XKR4Q5GH76 650 aa14.42□□□□□ -0.1
TUBB3-207ENST00000554927 KRT79Q5XKE5 535 aa14.42□□□□□ -0.1
TUBB3-207ENST00000554927 ALKAL1Q6UXT8 129 aa14.42□□□□□ -0.1
TUBB3-207ENST00000554927 BPIFB1Q8TDL5 484 aa14.42□□□□□ -0.1
TUBB3-207ENST00000554927 ZCCHC14Q8WYQ9 949 aaKnown RBP14.42□□□□□ -0.1
TUBB3-207ENST00000554927 ACAP3Q96P50 834 aa14.42□□□□□ -0.1
TUBB3-207ENST00000554927 LRRC3Q9BY71 257 aa14.42□□□□□ -0.1
TUBB3-207ENST00000554927 DNAJC25Q9H1X3 360 aa14.42□□□□□ -0.1
TUBB3-207ENST00000554927 PCDHB8Q9UN66 801 aa14.42□□□□□ -0.1
TUBB3-207ENST00000554927 LHX6Q9UPM6 363 aa14.42□□□□□ -0.1
TUBB3-207ENST00000554927 DNM3Q9UQ16 869 aa14.42□□□□□ -0.1
TUBB3-207ENST00000554927 SLC27A5Q9Y2P5 690 aa14.42□□□□□ -0.1
TUBB3-207ENST00000554927 TIMM13Q9Y5L4 95 aaPredicted RBP14.42□□□□□ -0.1
TUBB3-207ENST00000554927 PDCD11Q14690 1871 aaKnown RBP14.42□□□□□ -0.1
TUBB3-207ENST00000554927 CCDC169A6NNP5 214 aa14.41□□□□□ -0.1
TUBB3-207ENST00000554927 FGF19O95750 216 aa14.41□□□□□ -0.1
TUBB3-207ENST00000554927 KCNE1P15382 129 aa14.41□□□□□ -0.1
TUBB3-207ENST00000554927 GABRR2P28476 465 aa14.41□□□□□ -0.1
TUBB3-207ENST00000554927 GBP1P32455 592 aa14.41□□□□□ -0.1
TUBB3-207ENST00000554927 LRSAM1Q6UWE0 723 aa14.41□□□□□ -0.1
TUBB3-207ENST00000554927 DTHD1Q6ZMT9 781 aa14.41□□□□□ -0.1
TUBB3-207ENST00000554927 USP37Q86T82 979 aa14.41□□□□□ -0.1
TUBB3-207ENST00000554927 CAMKK1Q8N5S9 505 aa14.41□□□□□ -0.1
TUBB3-207ENST00000554927 SNX29Q8TEQ0 813 aa14.41□□□□□ -0.1
TUBB3-207ENST00000554927 KIFAP3Q92845 792 aa14.41□□□□□ -0.1
TUBB3-207ENST00000554927 ACO2Q99798 780 aaKnown RBP14.41□□□□□ -0.1
TUBB3-207ENST00000554927 SCNM1Q9BWG6 230 aa14.41□□□□□ -0.1
TUBB3-207ENST00000554927 DUSP15Q9H1R2 295 aaPredicted RBP14.41□□□□□ -0.1
TUBB3-207ENST00000554927 POLR3BQ9NW08 1133 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms