RNA–Protein interactions for RNA: ENST00000554839.1

NAB2-204, Transcript of NGFI-A binding protein 2, human

TSL 3

Gene NAB2, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NAB2-204	ENST00000554839	PPIG	Q13427	754 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
NAB2-204	ENST00000554839	STIL	Q15468	1287 aa		13.91	□□□□□ -0.18
NAB2-204	ENST00000554839	UPP1	Q16831	310 aa		13.91	□□□□□ -0.18
NAB2-204	ENST00000554839	DCLRE1A	Q6PJP8	1040 aa		13.91	□□□□□ -0.18
NAB2-204	ENST00000554839	TMEM270	Q6UE05	265 aa		13.91	□□□□□ -0.18
NAB2-204	ENST00000554839	TMEM86A	Q8N2M4	240 aa		13.91	□□□□□ -0.18
NAB2-204	ENST00000554839	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.91	□□□□□ -0.18
NAB2-204	ENST00000554839	RNF169	Q8NCN4	708 aa		13.91	□□□□□ -0.18
NAB2-204	ENST00000554839	SLC30A5	Q8TAD4	765 aa		13.91	□□□□□ -0.18
NAB2-204	ENST00000554839	FAM84A	Q96KN4	292 aa		13.91	□□□□□ -0.18
NAB2-204	ENST00000554839	ARID3A	Q99856	593 aa		13.91	□□□□□ -0.18
NAB2-204	ENST00000554839	HTATIP2	Q9BUP3	242 aa		13.91	□□□□□ -0.18
NAB2-204	ENST00000554839	CXCL16	Q9H2A7	254 aa		13.91	□□□□□ -0.18
NAB2-204	ENST00000554839	MIOS	Q9NXC5	875 aa		13.91	□□□□□ -0.18
NAB2-204	ENST00000554839	NXF1	Q9UBU9	619 aa	Known RBP	13.91	□□□□□ -0.18
NAB2-204	ENST00000554839	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.9	□□□□□ -0.18
NAB2-204	ENST00000554839	TRIM43B	A6NCK2	446 aa		13.9	□□□□□ -0.18
NAB2-204	ENST00000554839	PODXL	O00592	558 aa		13.9	□□□□□ -0.18
NAB2-204	ENST00000554839	HUS1	O60921	280 aa		13.9	□□□□□ -0.18
NAB2-204	ENST00000554839	PLEK	P08567	350 aa	Predicted RBP	13.9	□□□□□ -0.18
NAB2-204	ENST00000554839	GUCY2F	P51841	1108 aa		13.9	□□□□□ -0.18
NAB2-204	ENST00000554839	VAV2	P52735	878 aa		13.9	□□□□□ -0.18
NAB2-204	ENST00000554839	MTF1	Q14872	753 aa		13.9	□□□□□ -0.18
NAB2-204	ENST00000554839	CLLU1OS	Q5K130	101 aa		13.9	□□□□□ -0.18
NAB2-204	ENST00000554839	TOGARAM2	Q6ZUX3	1019 aa		13.9	□□□□□ -0.18
NAB2-204	ENST00000554839	APPL2	Q8NEU8	664 aa		13.9	□□□□□ -0.18
NAB2-204	ENST00000554839	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.9	□□□□□ -0.18
NAB2-204	ENST00000554839	FAM193B	Q96PV7	902 aa	Predicted RBP	13.9	□□□□□ -0.18
NAB2-204	ENST00000554839	TMEM175	Q9BSA9	504 aa		13.9	□□□□□ -0.18
NAB2-204	ENST00000554839	ZNF518B	Q9C0D4	1074 aa		13.9	□□□□□ -0.18
NAB2-204	ENST00000554839	IL23A	Q9NPF7	189 aa		13.9	□□□□□ -0.18
NAB2-204	ENST00000554839	RNF19A	Q9NV58	838 aa		13.9	□□□□□ -0.18
NAB2-204	ENST00000554839	ADAMTS1	Q9UHI8	967 aa		13.9	□□□□□ -0.18
NAB2-204	ENST00000554839	NAGPA	Q9UK23	515 aa		13.9	□□□□□ -0.18
NAB2-204	ENST00000554839	DSE	Q9UL01	958 aa		13.9	□□□□□ -0.18
NAB2-204	ENST00000554839	NENF	Q9UMX5	172 aa		13.9	□□□□□ -0.18
NAB2-204	ENST00000554839	SNX9	Q9Y5X1	595 aa		13.9	□□□□□ -0.18
NAB2-204	ENST00000554839		A0A087X0T9	212 aa		13.89	□□□□□ -0.19
NAB2-204	ENST00000554839	BTNL10	A8MVZ5	291 aa		13.89	□□□□□ -0.19
NAB2-204	ENST00000554839	PJA2	O43164	708 aa		13.89	□□□□□ -0.19
NAB2-204	ENST00000554839	KRT86	O43790	486 aa		13.89	□□□□□ -0.19
NAB2-204	ENST00000554839	LSM8	O95777	96 aa	Known RBP	13.89	□□□□□ -0.19
NAB2-204	ENST00000554839	AMH	P03971	560 aa		13.89	□□□□□ -0.19
NAB2-204	ENST00000554839	WEE2	P0C1S8	567 aa		13.89	□□□□□ -0.19
NAB2-204	ENST00000554839	FAM228B	P0C875	321 aa		13.89	□□□□□ -0.19
NAB2-204	ENST00000554839	WARS	P23381	471 aa	Known RBP	13.89	□□□□□ -0.19
NAB2-204	ENST00000554839	GNA15	P30679	374 aa		13.89	□□□□□ -0.19
NAB2-204	ENST00000554839	ALKBH5	Q6P6C2	394 aa	Known RBP	13.89	□□□□□ -0.19
NAB2-204	ENST00000554839	DEFB128	Q7Z7B8	93 aa		13.89	□□□□□ -0.19
NAB2-204	ENST00000554839	SLC47A2	Q86VL8	602 aa		13.89	□□□□□ -0.19
NAB2-204	ENST00000554839	UBE2Q2	Q8WVN8	375 aa		13.89	□□□□□ -0.19
NAB2-204	ENST00000554839	DDX1	Q92499	740 aa	Known RBP	13.89	□□□□□ -0.19
NAB2-204	ENST00000554839	TMEM176A	Q96HP8	235 aa		13.89	□□□□□ -0.19
NAB2-204	ENST00000554839	MMS19	Q96T76	1030 aa		13.89	□□□□□ -0.19
NAB2-204	ENST00000554839	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
NAB2-204	ENST00000554839	NT5C1A	Q9BXI3	368 aa		13.89	□□□□□ -0.19
NAB2-204	ENST00000554839	MYO1A	Q9UBC5	1043 aa		13.89	□□□□□ -0.19
NAB2-204	ENST00000554839	PCDHGC3	Q9UN70	934 aa		13.89	□□□□□ -0.19
NAB2-204	ENST00000554839	POLI	Q9UNA4	740 aa		13.89	□□□□□ -0.19
NAB2-204	ENST00000554839	PCDHA13	Q9Y5I0	950 aa		13.89	□□□□□ -0.19
NAB2-204	ENST00000554839	TSC2	P49815	1807 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839		M0QZQ0	153 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	DDX3X	O00571	662 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	TRAPPC3	O43617	180 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	KIF4A	O95239	1232 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	POMC	P01189	267 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	CYP11A1	P05108	521 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	VDR	P11473	427 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	MAGEA1	P43355	309 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	LHX1	P48742	406 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	CLCNKB	P51801	687 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	RNASEL	Q05823	741 aa	Known RBP	13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	KIF5A	Q12840	1032 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	SOWAHA	Q2M3V2	549 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	KIAA1328	Q86T90	577 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	NOP9	Q86U38	636 aa	Known RBP	13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	REXO1L1P	Q8IX06	675 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	COLGALT2	Q8IYK4	626 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	CRYBG2	Q8N1P7	616 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	LRRC43	Q8N309	656 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	RNF10	Q8N5U6	811 aa	Known RBP	13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	ZNF606	Q8WXB4	792 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	TOP1MT	Q969P6	601 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	VWCE	Q96DN2	955 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	VCPIP1	Q96JH7	1222 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	PPP1R13B	Q96KQ4	1090 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	CASD1	Q96PB1	797 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	ISCU	Q9H1K1	167 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	SMYD3	Q9H7B4	428 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	TBC1D13	Q9NVG8	400 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	INPP5F	Q9Y2H2	1132 aa		13.88	□□□□□ -0.19
NAB2-204	ENST00000554839	PPEF2	O14830	753 aa		13.87	□□□□□ -0.19
NAB2-204	ENST00000554839	RTN2	O75298	545 aa		13.87	□□□□□ -0.19
NAB2-204	ENST00000554839	H2AFZ	P0C0S5	128 aa		13.87	□□□□□ -0.19
NAB2-204	ENST00000554839	PNMA6A	P0CW24	399 aa	Predicted RBP	13.87	□□□□□ -0.19
NAB2-204	ENST00000554839	ODC1	P11926	461 aa		13.87	□□□□□ -0.19
NAB2-204	ENST00000554839	CSF2RA	P15509	400 aa		13.87	□□□□□ -0.19
NAB2-204	ENST00000554839	CD58	P19256	250 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms