RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 CCZ1BP86790 482 aa15.36■□□□□ 0.05
SHOX2-206ENST00000554685 CCZ1P86791 482 aaPredicted RBP15.36■□□□□ 0.05
SHOX2-206ENST00000554685 ARID5AQ03989 594 aa15.36■□□□□ 0.05
SHOX2-206ENST00000554685 PTK2Q05397 1052 aa15.36■□□□□ 0.05
SHOX2-206ENST00000554685 DSTYKQ6XUX3 929 aa15.36■□□□□ 0.05
SHOX2-206ENST00000554685 C16orf59Q7L2K0 433 aa15.36■□□□□ 0.05
SHOX2-206ENST00000554685 TMEM86AQ8N2M4 240 aa15.36■□□□□ 0.05
SHOX2-206ENST00000554685 UBR7Q8N806 425 aa15.36■□□□□ 0.05
SHOX2-206ENST00000554685 RBBP8NLQ8NC74 664 aaPredicted RBP15.36■□□□□ 0.05
SHOX2-206ENST00000554685 PHOSPHO2Q8TCD6 241 aa15.36■□□□□ 0.05
SHOX2-206ENST00000554685 CCDC42Q96M95 316 aa15.36■□□□□ 0.05
SHOX2-206ENST00000554685 SMYD3Q9H7B4 428 aa15.36■□□□□ 0.05
SHOX2-206ENST00000554685 NRDE2Q9H7Z3 1164 aa15.36■□□□□ 0.05
SHOX2-206ENST00000554685 DSEQ9UL01 958 aa15.36■□□□□ 0.05
SHOX2-206ENST00000554685 RBAK-RBAKDNI3L0D1 243 aa15.35■□□□□ 0.05
SHOX2-206ENST00000554685 DDHD2O94830 711 aa15.35■□□□□ 0.05
SHOX2-206ENST00000554685 IPO7O95373 1038 aaKnown RBP15.35■□□□□ 0.05
SHOX2-206ENST00000554685 ALDH2P05091 517 aa15.35■□□□□ 0.05
SHOX2-206ENST00000554685 WEE2P0C1S8 567 aa15.35■□□□□ 0.05
SHOX2-206ENST00000554685 ODC1P11926 461 aa15.35■□□□□ 0.05
SHOX2-206ENST00000554685 CD58P19256 250 aa15.35■□□□□ 0.05
SHOX2-206ENST00000554685 AARSP49588 968 aaKnown RBP eCLIP15.35■□□□□ 0.054e-6■■■■□ 24
SHOX2-206ENST00000554685 INCA1Q0VD86 236 aa15.35■□□□□ 0.05
SHOX2-206ENST00000554685 ELAVL2Q12926 359 aaKnown RBP15.35■□□□□ 0.05
SHOX2-206ENST00000554685 SCARA3Q6AZY7 606 aa15.35■□□□□ 0.05
SHOX2-206ENST00000554685 WDR59Q6PJI9 974 aa15.35■□□□□ 0.05
SHOX2-206ENST00000554685 TMEM270Q6UE05 265 aa15.35■□□□□ 0.05
SHOX2-206ENST00000554685 IRF2BP2Q7Z5L9 587 aa15.35■□□□□ 0.05
SHOX2-206ENST00000554685 UNC93AQ86WB7 457 aa15.35■□□□□ 0.05
SHOX2-206ENST00000554685 METTL23Q86XA0 190 aa15.35■□□□□ 0.05
SHOX2-206ENST00000554685 ZNF677Q86XU0 584 aa15.35■□□□□ 0.05
SHOX2-206ENST00000554685 ZNF280BQ86YH2 543 aa15.35■□□□□ 0.05
SHOX2-206ENST00000554685 TMEM139Q8IV31 216 aa15.35■□□□□ 0.05
SHOX2-206ENST00000554685 ELMO3Q96BJ8 720 aa15.35■□□□□ 0.05
SHOX2-206ENST00000554685 ZNF689Q96CS4 500 aaPredicted RBP15.35■□□□□ 0.05
SHOX2-206ENST00000554685 SENP8Q96LD8 212 aa15.35■□□□□ 0.05
SHOX2-206ENST00000554685 YME1L1Q96TA2 773 aa15.35■□□□□ 0.05
SHOX2-206ENST00000554685 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.35■□□□□ 0.051e-6■□□□□ 9.9
SHOX2-206ENST00000554685 BARX2Q9UMQ3 279 aaPredicted RBP15.35■□□□□ 0.05
SHOX2-206ENST00000554685 FAN1Q9Y2M0 1017 aa15.35■□□□□ 0.05
SHOX2-206ENST00000554685 SLC4A7Q9Y6M7 1214 aa15.35■□□□□ 0.05
SHOX2-206ENST00000554685 CYB561D2O14569 222 aa15.34■□□□□ 0.05
SHOX2-206ENST00000554685 SPTLC1O15269 473 aa15.34■□□□□ 0.05
SHOX2-206ENST00000554685 CYP26A1O43174 497 aa15.34■□□□□ 0.05
SHOX2-206ENST00000554685 CILPO75339 1184 aa15.34■□□□□ 0.05
SHOX2-206ENST00000554685 PAEPP09466 180 aa15.34■□□□□ 0.05
SHOX2-206ENST00000554685 PNMA6AP0CW24 399 aaPredicted RBP15.34■□□□□ 0.05
SHOX2-206ENST00000554685 GATMP50440 423 aa15.34■□□□□ 0.05
SHOX2-206ENST00000554685 BTG3Q14201 252 aaPredicted RBP15.34■□□□□ 0.05
SHOX2-206ENST00000554685 PAN2Q504Q3 1202 aaKnown RBP15.34■□□□□ 0.05
SHOX2-206ENST00000554685 E4F1Q66K89 784 aaPredicted RBP15.34■□□□□ 0.05
SHOX2-206ENST00000554685 HGSNATQ68CP4 663 aa15.34■□□□□ 0.05
SHOX2-206ENST00000554685 LIMS2Q7Z4I7 341 aa15.34■□□□□ 0.05
SHOX2-206ENST00000554685 ADGRF2Q8IZF7 708 aa15.34■□□□□ 0.05
SHOX2-206ENST00000554685 TMEM130Q8N3G9 435 aa15.34■□□□□ 0.05
SHOX2-206ENST00000554685 SUSD3Q96L08 255 aa15.34■□□□□ 0.05
SHOX2-206ENST00000554685 SNX25Q9H3E2 840 aa15.34■□□□□ 0.05
SHOX2-206ENST00000554685 KCNF1Q9H3M0 494 aa15.34■□□□□ 0.05
SHOX2-206ENST00000554685 HAUS4Q9H6D7 363 aa15.34■□□□□ 0.05
SHOX2-206ENST00000554685 NHEJ1Q9H9Q4 299 aaPredicted RBP15.34■□□□□ 0.05
SHOX2-206ENST00000554685 ARHGAP20Q9P2F6 1191 aa15.34■□□□□ 0.05
SHOX2-206ENST00000554685 KIAA1257Q9ULG3 409 aa15.34■□□□□ 0.05
SHOX2-206ENST00000554685 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.34■□□□□ 0.05
SHOX2-206ENST00000554685 TRIP11Q15643 1979 aa15.34■□□□□ 0.05
SHOX2-206ENST00000554685 TDRD15B5MCY1 1934 aaKnown RBP15.33■□□□□ 0.05
SHOX2-206ENST00000554685 M0QZQ0 153 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 MED7O43513 233 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 AKR1B10O60218 316 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 TADA2AO75478 443 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 KIF4AO95239 1232 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 GJB5O95377 273 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 LAG3P18627 525 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 TYMPP19971 482 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 WARSP23381 471 aaKnown RBP15.33■□□□□ 0.04
SHOX2-206ENST00000554685 CLCN1P35523 988 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 EIF4A3P38919 411 aaKnown RBP15.33■□□□□ 0.04
SHOX2-206ENST00000554685 RAP1GAPP47736 663 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 LHX1P48742 406 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 ALDH7A1P49419 539 aaKnown RBP15.33■□□□□ 0.04
SHOX2-206ENST00000554685 ZNF132P52740 706 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 EPHB4P54760 987 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 BMS1Q14692 1282 aaKnown RBP15.33■□□□□ 0.04
SHOX2-206ENST00000554685 SOWAHAQ2M3V2 549 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 SPOUT1Q5T280 376 aaKnown RBP15.33■□□□□ 0.04
SHOX2-206ENST00000554685 C3orf58Q8NDZ4 430 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 OR6B3Q8NGW1 331 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 EPS8L1Q8TE68 723 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 ZNF830Q96NB3 372 aaPredicted RBP15.33■□□□□ 0.04
SHOX2-206ENST00000554685 CHP1Q99653 195 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 PAAF1Q9BRP4 392 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 ZBED2Q9BTP6 218 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 NT5C1AQ9BXI3 368 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 SDCBP2Q9H190 292 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 RC3H2Q9HBD1 1191 aaKnown RBP15.33■□□□□ 0.04
SHOX2-206ENST00000554685 LUC7LQ9NQ29 371 aaKnown RBP15.33■□□□□ 0.04
SHOX2-206ENST00000554685 AAASQ9NRG9 546 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 DNAJB4Q9UDY4 337 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 PCDHB8Q9UN66 801 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 L1RE1Q9UN81 338 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 PRG3Q9Y2Y8 225 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms