RNA–Protein interactions for RNA: ENST00000554684.5

PPP4R3A-205, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R3A, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-205ENST00000554684 MTM1Q13496 603 aa17.09■□□□□ 0.33
PPP4R3A-205ENST00000554684 C18orf8Q96DM3 657 aa17.09■□□□□ 0.33
PPP4R3A-205ENST00000554684 GPR20Q99678 358 aa17.09■□□□□ 0.33
PPP4R3A-205ENST00000554684 NIF3L1Q9GZT8 377 aa17.09■□□□□ 0.33
PPP4R3A-205ENST00000554684 NKRFO15226 690 aaKnown RBP eCLIP17.09■□□□□ 0.33
PPP4R3A-205ENST00000554684 SMPD1P17405 629 aa17.09■□□□□ 0.33
PPP4R3A-205ENST00000554684 TNFSF9P41273 254 aa17.09■□□□□ 0.33
PPP4R3A-205ENST00000554684 SP2Q02086 613 aa17.09■□□□□ 0.33
PPP4R3A-205ENST00000554684 DMTNQ08495 405 aa17.09■□□□□ 0.33
PPP4R3A-205ENST00000554684 CUL2Q13617 745 aa17.09■□□□□ 0.33
PPP4R3A-205ENST00000554684 DUSP28Q4G0W2 176 aa17.09■□□□□ 0.33
PPP4R3A-205ENST00000554684 RBM41Q96IZ5 413 aaKnown RBP17.09■□□□□ 0.33
PPP4R3A-205ENST00000554684 MCEEQ96PE7 176 aa17.09■□□□□ 0.33
PPP4R3A-205ENST00000554684 XIRP1Q702N8 1843 aaKnown RBP17.09■□□□□ 0.33
PPP4R3A-205ENST00000554684 ALDH7A1P49419 539 aaKnown RBP17.09■□□□□ 0.33
PPP4R3A-205ENST00000554684 IP6K2Q9UHH9 426 aa17.09■□□□□ 0.33
PPP4R3A-205ENST00000554684 MARF1Q9Y4F3 1742 aaKnown RBP17.08■□□□□ 0.33
PPP4R3A-205ENST00000554684 CA12O43570 354 aa17.08■□□□□ 0.33
PPP4R3A-205ENST00000554684 TERF2Q15554 542 aa17.08■□□□□ 0.33
PPP4R3A-205ENST00000554684 TMEM139Q8IV31 216 aa17.08■□□□□ 0.33
PPP4R3A-205ENST00000554684 PIDD1Q9HB75 910 aa17.08■□□□□ 0.33
PPP4R3A-205ENST00000554684 CHD4Q14839 1912 aa17.08■□□□□ 0.33
PPP4R3A-205ENST00000554684 DDX3XO00571 662 aaKnown RBP eCLIP17.08■□□□□ 0.321e-6■■■□□ 15.8
PPP4R3A-205ENST00000554684 RASGRF2O14827 1237 aa17.08■□□□□ 0.32
PPP4R3A-205ENST00000554684 ASGR1P07306 291 aa17.08■□□□□ 0.32
PPP4R3A-205ENST00000554684 NR1D1P20393 614 aa17.08■□□□□ 0.32
PPP4R3A-205ENST00000554684 CHRNA3P32297 505 aa17.08■□□□□ 0.32
PPP4R3A-205ENST00000554684 GNL1P36915 607 aaPredicted RBP17.08■□□□□ 0.32
PPP4R3A-205ENST00000554684 PAPD7Q5XG87 772 aaKnown RBP17.08■□□□□ 0.32
PPP4R3A-205ENST00000554684 ABHD15Q6UXT9 468 aa17.08■□□□□ 0.32
PPP4R3A-205ENST00000554684 USP38Q8NB14 1042 aa17.08■□□□□ 0.32
PPP4R3A-205ENST00000554684 TNIP3Q96KP6 325 aa17.08■□□□□ 0.32
PPP4R3A-205ENST00000554684 C12orf42Q96LP6 360 aa17.08■□□□□ 0.32
PPP4R3A-205ENST00000554684 NT5C1AQ9BXI3 368 aa17.08■□□□□ 0.32
PPP4R3A-205ENST00000554684 INTS9Q9NV88 658 aaKnown RBP17.08■□□□□ 0.32
PPP4R3A-205ENST00000554684 ARHGEF37A1IGU5 675 aa17.08■□□□□ 0.32
PPP4R3A-205ENST00000554684 IGF2BP3O00425 579 aaKnown RBP eCLIP17.08■□□□□ 0.32
PPP4R3A-205ENST00000554684 MAP3K6O95382 1288 aa17.08■□□□□ 0.32
PPP4R3A-205ENST00000554684 PDCLQ13371 301 aa17.08■□□□□ 0.32
PPP4R3A-205ENST00000554684 C1orf131Q8NDD1 294 aaKnown RBP17.08■□□□□ 0.32
PPP4R3A-205ENST00000554684 PGLYRP2Q96PD5 576 aa17.08■□□□□ 0.32
PPP4R3A-205ENST00000554684 DHX35Q9H5Z1 703 aaKnown RBP17.08■□□□□ 0.32
PPP4R3A-205ENST00000554684 WRAP73Q9P2S5 460 aaPredicted RBP17.08■□□□□ 0.32
PPP4R3A-205ENST00000554684 CDY2AQ9Y6F7 541 aa17.08■□□□□ 0.32
PPP4R3A-205ENST00000554684 SLX4Q8IY92 1834 aa17.08■□□□□ 0.32
PPP4R3A-205ENST00000554684 TARSL2A2RTX5 802 aaKnown RBP17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 CDR2Q01850 454 aa17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 NOL9Q5SY16 702 aaKnown RBP17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 SAPCD2Q86UD0 394 aa17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 CYFIP2Q96F07 1278 aa17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 FBXL5Q9UKA1 691 aa17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 USP54Q70EL1 1684 aa17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 ACKR2O00590 384 aa17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 PHBP35232 272 aa17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 MYBPC2Q14324 1141 aa17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 SLMAPQ14BN4 828 aa17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 SMTNL2Q2TAL5 461 aa17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 SPATA2LQ8IUW3 424 aaPredicted RBP17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 BAP1Q92560 729 aa17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 P3H4Q92791 437 aa17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 ARHGAP39Q9C0H5 1083 aa17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 KIF9Q9HAQ2 790 aa17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 TOGARAM1Q9Y4F4 1720 aa17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 RECQL4O94761 1208 aa17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 THP07101 528 aa17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 MYBL1P10243 752 aa17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 ACO1P21399 889 aaKnown RBP17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 MXRA7P84157 204 aa17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 TMEM161BQ8NDZ6 487 aa17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 SPIRE2Q8WWL2 714 aa17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 TMEM169Q96HH4 297 aa17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 YME1L1Q96TA2 773 aa17.07■□□□□ 0.32
PPP4R3A-205ENST00000554684 TRAPPC3O43617 180 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 ZBED1O96006 694 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 RRM1P23921 792 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 CD52P31358 61 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 MAP4K3Q8IVH8 894 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 NPLOC4Q8TAT6 608 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 TMC2Q8TDI7 906 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 ZKSCAN8Q15776 578 aaPredicted RBP17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 EXOC4Q96A65 974 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 LENG9Q96B70 501 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 GTF3C4Q9UKN8 822 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 PRRG1O14668 218 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 SRGAP2BP0DMP2 458 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 PDGFRAP16234 1089 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 TAF6P49848 677 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 TMED2Q15363 201 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 TAF2Q6P1X5 1199 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 BSNDQ8WZ55 320 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 TRIM7Q9C029 511 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 ASNSD1Q9NWL6 643 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 VGLL3A8MV65 326 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 LACTBL1A8MY62 500 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 OPLAHO14841 1288 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 ADRB2P07550 413 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 MAPTP10636 758 aaKnown RBP17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 SETDB1Q15047 1291 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 KCNA10Q16322 511 aa17.06■□□□□ 0.32
PPP4R3A-205ENST00000554684 LGSNQ5TDP6 509 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms