RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 CDT1Q9H211 546 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 SMARCAD1Q9H4L7 1026 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 PDZD7Q9H5P4 517 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 AGO3Q9H9G7 860 aaKnown RBP6.36□□□□□ -1.39
ATXN3-230ENST00000554673 SUGCTQ9HAC7 445 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 KMT5AQ9NQR1 393 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 NDFIP2Q9NV92 336 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 SUCLA2Q9P2R7 463 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-230ENST00000554673 CACNG4Q9UBN1 327 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 SIX4Q9UIU6 781 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 HOOK1Q9UJC3 728 aaKnown RBP6.36□□□□□ -1.39
ATXN3-230ENST00000554673 PRKAB1Q9Y478 270 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 GBF1Q92538 1859 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 MKI67P46013 3256 aaKnown RBP6.35□□□□□ -1.39
ATXN3-230ENST00000554673 TTC3P53804 2025 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 COL1A2P08123 1366 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 GREB1Q4ZG55 1949 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 LRRIQ4A6NIV6 560 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 CCDC169A6NNP5 214 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 SLC16A3O15427 465 aaKnown RBP6.35□□□□□ -1.39
ATXN3-230ENST00000554673 SEPT4O43236 478 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 ZNF500O60304 480 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-230ENST00000554673 NPTXRO95502 500 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 SERPINC1P01008 464 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 CHRNA1P02708 482 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 C4BPAP04003 597 aaKnown RBP6.35□□□□□ -1.39
ATXN3-230ENST00000554673 MYL3P08590 195 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 SRGAP2CP0DJJ0 459 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 SKILP12757 684 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 ATF7P17544 494 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-230ENST00000554673 CHRNB2P17787 502 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 ACO1P21399 889 aaKnown RBP6.35□□□□□ -1.39
ATXN3-230ENST00000554673 CST5P28325 142 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-230ENST00000554673 GCLMP48507 274 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 FMO5P49326 533 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 FCGRTP55899 365 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 UBXN1Q04323 297 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 SPAG1Q07617 926 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 PPFIA1Q13136 1202 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 RAB33AQ14088 237 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 TLR1Q15399 786 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 KIZQ2M2Z5 673 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 HS1BP3Q53T59 392 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 ZNF484Q5JVG2 852 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 KLHDC7AQ5VTJ3 777 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 IER5Q5VY09 327 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 TDRD10Q5VZ19 366 aaKnown RBP6.35□□□□□ -1.39
ATXN3-230ENST00000554673 SPOPLQ6IQ16 392 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 XKR5Q6UX68 686 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 IRF2BP2Q7Z5L9 587 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 FRMD5Q7Z6J6 570 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 ZSCAN30Q86W11 494 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 CPNE8Q86YQ8 564 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 FAM186BQ8IYM0 893 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 RNF149Q8NC42 400 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 MCPH1Q8NEM0 835 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 NOC3LQ8WTT2 800 aaKnown RBP6.35□□□□□ -1.39
ATXN3-230ENST00000554673 KIFAP3Q92845 792 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 TRIM11Q96F44 468 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 ZMAT2Q96NC0 199 aaKnown RBP6.35□□□□□ -1.39
ATXN3-230ENST00000554673 ACCSQ96QU6 501 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 PI4K2AQ9BTU6 479 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 RSRP1Q9BUV0 290 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 NOC4LQ9BVI4 516 aaKnown RBP6.35□□□□□ -1.39
ATXN3-230ENST00000554673 TIPINQ9BVW5 301 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 LSM14BQ9BX40 385 aaKnown RBP6.35□□□□□ -1.39
ATXN3-230ENST00000554673 EIF2AQ9BY44 585 aaKnown RBP6.35□□□□□ -1.39
ATXN3-230ENST00000554673 LACRTQ9GZZ8 138 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 IRF2BPLQ9H1B7 796 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 SPC25Q9HBM1 224 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 PDE11AQ9HCR9 933 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 ZFP64Q9NPA5 681 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 KCND1Q9NSA2 647 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 ABHD10Q9NUJ1 306 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 SNTG2Q9NY99 539 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 ERAP1Q9NZ08 941 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 ADAMTS1Q9UHI8 967 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 CPSF3Q9UKF6 684 aaKnown RBP6.35□□□□□ -1.39
ATXN3-230ENST00000554673 CAPN11Q9UMQ6 739 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 PLAGL2Q9UPG8 496 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 COQ4Q9Y3A0 265 aa6.35□□□□□ -1.39
ATXN3-230ENST00000554673 KIAA0100Q14667 2235 aaKnown RBP6.35□□□□□ -1.39
ATXN3-230ENST00000554673 PHLPP2Q6ZVD8 1323 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 BICDL2A1A5D9 508 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 DCDC2BA2VCK2 349 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 LRRC53A6NM62 1247 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 HCRTO43612 131 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 CST3P01034 146 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-230ENST00000554673 PRKCBP05771 671 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 CD33P20138 364 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 ETFBP38117 255 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 MTIF2P46199 727 aaKnown RBP6.34□□□□□ -1.39
ATXN3-230ENST00000554673 PLA2G4AP47712 749 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 DNM2P50570 870 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 SOX4Q06945 474 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-230ENST00000554673 MCL1Q07820 350 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 BFSP1Q12934 665 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 DMP1Q13316 513 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-230ENST00000554673 NAB2Q15742 525 aa6.34□□□□□ -1.39
ATXN3-230ENST00000554673 KCNA10Q16322 511 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms