RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 DMXL1Q9Y485 3027 aa15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 FANCMQ8IYD8 2048 aa15.21■□□□□ 0.03
SPTLC2-202ENST00000554365 WDR27A2RRH5 827 aa15.21■□□□□ 0.03
SPTLC2-202ENST00000554365 CCDC169A6NNP5 214 aa15.21■□□□□ 0.03
SPTLC2-202ENST00000554365 TBCAO75347 108 aaKnown RBP15.21■□□□□ 0.03
SPTLC2-202ENST00000554365 FAM13AO94988 1023 aa15.21■□□□□ 0.03
SPTLC2-202ENST00000554365 GAP43P17677 238 aa15.21■□□□□ 0.03
SPTLC2-202ENST00000554365 GRM5P41594 1212 aa15.21■□□□□ 0.03
SPTLC2-202ENST00000554365 NLRP12P59046 1061 aa15.21■□□□□ 0.03
SPTLC2-202ENST00000554365 STK4Q13043 487 aa15.21■□□□□ 0.03
SPTLC2-202ENST00000554365 GRM2Q14416 872 aa15.21■□□□□ 0.03
SPTLC2-202ENST00000554365 RSPO4Q2I0M5 234 aaPredicted RBP15.21■□□□□ 0.03
SPTLC2-202ENST00000554365 DPCR1Q3MIW9 517 aa15.21■□□□□ 0.03
SPTLC2-202ENST00000554365 SLC8B1Q6J4K2 584 aa15.21■□□□□ 0.03
SPTLC2-202ENST00000554365 POTEHQ6S545 545 aa15.21■□□□□ 0.03
SPTLC2-202ENST00000554365 ZNF461Q8TAF7 563 aa15.21■□□□□ 0.03
SPTLC2-202ENST00000554365 NELL2Q99435 816 aa15.21■□□□□ 0.03
SPTLC2-202ENST00000554365 CDT1Q9H211 546 aa15.21■□□□□ 0.03
SPTLC2-202ENST00000554365 PARVGQ9HBI0 331 aa15.21■□□□□ 0.03
SPTLC2-202ENST00000554365 CYP4F11Q9HBI6 524 aa15.21■□□□□ 0.03
SPTLC2-202ENST00000554365 EXOC1Q9NV70 894 aa15.21■□□□□ 0.03
SPTLC2-202ENST00000554365 RMND1Q9NWS8 449 aa15.21■□□□□ 0.03
SPTLC2-202ENST00000554365 MRPS17Q9Y2R5 130 aaKnown RBP15.21■□□□□ 0.03
SPTLC2-202ENST00000554365 PATJQ8NI35 1801 aa15.21■□□□□ 0.03
SPTLC2-202ENST00000554365 CACNA1AO00555 2505 aa15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 CACNA1IQ9P0X4 2223 aa15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 ARHGEF37A1IGU5 675 aa15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 PODXLO00592 558 aa15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 PLS3P13797 630 aa15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 CD44P16070 742 aaKnown RBP15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 CASP5P51878 434 aa15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 PEX3P56589 373 aa15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 FAM26FQ5R3K3 315 aa15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 ZNF658Q5TYW1 1059 aaPredicted RBP15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 SASS6Q6UVJ0 657 aa15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 LRSAM1Q6UWE0 723 aa15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 SMYD4Q8IYR2 804 aaPredicted RBP15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 SECISBP2LQ93073 1101 aaKnown RBP15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 CLDN23Q96B33 292 aa15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 ELSPBP1Q96BH3 223 aa15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 TCEAL4Q96EI5 215 aa15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 BORCS6Q96GS4 357 aa15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 DRC1Q96MC2 740 aa15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 ACO2Q99798 780 aaKnown RBP15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 BRD9Q9H8M2 597 aa15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 AVENQ9NQS1 362 aaPredicted RBP15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 OLFML3Q9NRN5 406 aa15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 SLC38A7Q9NVC3 462 aa15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 ZSCAN32Q9NX65 697 aa15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 DLL3Q9NYJ7 618 aa15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 NDRG2Q9UN36 371 aaKnown RBP15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 SMG5Q9UPR3 1016 aaKnown RBP15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 NUB1Q9Y5A7 615 aa15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 NOTCH4Q99466 2003 aa15.2■□□□□ 0.02
SPTLC2-202ENST00000554365 FRYLO94915 3013 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 PHLPP2Q6ZVD8 1323 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 PPP1R3GB7ZBB8 358 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 H7C4K7 107 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 ABLIM3O94929 683 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 SEC24AO95486 1093 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 HARSP12081 509 aaKnown RBP15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 ATF2P15336 505 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 RPS9P46781 194 aaKnown RBP15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 NPTX2P47972 431 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 ADCY1Q08828 1119 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 PSMD2Q13200 908 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 STX1AQ16623 288 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 COBLL1Q53SF7 1204 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 FAM78AQ5JUQ0 283 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 ALKAL1Q6UXT8 129 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 C11orf57Q6ZUT1 292 aaPredicted RBP15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 PDZD4Q76G19 769 aaPredicted RBP15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 EPM2AIP1Q7L775 607 aaPredicted RBP15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 MYCT1Q8N699 235 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 ZBTB44Q8NCP5 570 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 DNASE1L2Q92874 299 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 ZMAT2Q96NC0 199 aaKnown RBP15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 TCHPQ9BT92 498 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 TARS2Q9BW92 718 aaKnown RBP15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 STRA6Q9BX79 667 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 MRPL4Q9BYD3 311 aaKnown RBP15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 ZHX3Q9H4I2 956 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 ZFP14Q9HCL3 533 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 SLC39A2Q9NP94 309 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 TBC1D7Q9P0N9 293 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 SEL1LQ9UBV2 794 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 INSL5Q9Y5Q6 135 aa15.19■□□□□ 0.02
SPTLC2-202ENST00000554365 OTOGLQ3ZCN5 2332 aa15.18■□□□□ 0.02
SPTLC2-202ENST00000554365 ZNF197O14709 1029 aa15.18■□□□□ 0.02
SPTLC2-202ENST00000554365 SYN3O14994 580 aa15.18■□□□□ 0.02
SPTLC2-202ENST00000554365 PPP1R37O75864 691 aa15.18■□□□□ 0.02
SPTLC2-202ENST00000554365 CCDC192P0DO97 292 aa15.18■□□□□ 0.02
SPTLC2-202ENST00000554365 FCARP24071 287 aa15.18■□□□□ 0.02
SPTLC2-202ENST00000554365 NMT1P30419 496 aaKnown RBP15.18■□□□□ 0.02
SPTLC2-202ENST00000554365 CCR2P41597 374 aa15.18■□□□□ 0.02
SPTLC2-202ENST00000554365 NCKAP1LP55160 1127 aa15.18■□□□□ 0.02
SPTLC2-202ENST00000554365 MTAPQ13126 283 aa15.18■□□□□ 0.02
SPTLC2-202ENST00000554365 DMP1Q13316 513 aaPredicted RBP15.18■□□□□ 0.02
SPTLC2-202ENST00000554365 CTXN3Q4LDR2 81 aa15.18■□□□□ 0.02
SPTLC2-202ENST00000554365 XKR4Q5GH76 650 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms